Directory Agmial2/pa_manager/web/

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Most Recent Commits

vloux 2007-01-24 18:15

Added classes to manage goterms, keywords and origin of a match.
Display of origin in table and graphics

0 lines of code changed in:

• Agmial2/pa_manager/web: context.xml.in (changed)

vloux 2006-11-22 18:10

- EasyQB : changed default limit for list (5000) and DOJOTable (100) both in DisplayerAdpater and web.xml.in
- ExternalTools : bugfix in the way multiple generated form are named

6 lines of code changed in:

• Agmial2/pa_manager/web: web.xml.in (+6 -3)

vloux 2006-11-22 17:29

- GlobalPanel : cosmetic fix.
- Added a new page "External Tools" with links to blast, artemis and metabolism comparison.

24 lines of code changed in:

• Agmial2/pa_manager/web: web.xml.in (+24)

vloux 2006-11-16 16:46

Addition of a statistics page with pie charts (Function, Status, EC) made with JFreeChart.

32 lines of code changed in:

• Agmial2/pa_manager/web: web.xml.in (+32)

vloux 2006-10-25 15:40

Redirection from xxx-prot/ empty directory to reader/index.html

15 lines of code changed in:

• Agmial2/pa_manager/web: index.html (new 15)

vloux 2006-10-25 11:41

Merge CedricSoubrie branch and HEAD

386 lines of code changed in:

• Agmial2/pa_manager/web: ProteinSourceAdmin_Config.patch (del), context.xml.in (changed), main_menu.html (del), pam.css (+386 -95), web_public_dir.xml (del), web_public_dir.xml.in (del)

vloux 2006-10-24 11:31

Merge CedricSoubrie branch and HEAD

135 lines of code changed in:

• Agmial2/pa_manager/web: web.xml.in (+135 -1)

csoubrie 2006-10-02 15:13

Final version of the refactored Search

1 lines of code changed in:

• Agmial2/pa_manager/web: 403_error.html (del), admin_intro.html (del), browse_intro.html (del), context.xml.in (changed), error.html (del), file_not_found_error.html (del), index.html (del), javascript_error.html (+1 -1), login_error.html (del), main_intro.html (del), main_intro.html.in (del), main_menu.html.in (del), server_error.html (del), sidebar_intro.html (del)

csoubrie 2006-07-31 16:05

*** empty log message ***

128 lines of code changed in:

• Agmial2/pa_manager/web: iframe_history.html (new 54), javascript_error.html (new 74)

vloux 2006-04-04 15:04

Browse by Locus Tag

5 lines of code changed in:

• Agmial2/pa_manager/web: web.xml.in (+5)

vloux 2006-03-17 17:32

BugFix

CAM :
contigDB
Gestion DataSource
Prepa release 20060317

28 lines of code changed in:

• Agmial2/pa_manager/web: main_intro.html (+24 -30), main_menu.html (+4 -4)

vloux 2006-03-16 13:01

Chgt wsdl
Pool connection sgbd
BugFix Search
Control

5 lines of code changed in:

• Agmial2/pa_manager/web: context.xml.in (changed), main_menu.html.in (changed), web.xml.in (+5 -1)

vloux 2006-03-07 17:24

MAJ presentation page accueil managers

32 lines of code changed in:

• Agmial2/pa_manager/web: main_intro.html.in (changed), pam.css (+32)

vloux 2006-03-07 15:31

Fin nettoyage properties cam/pam
Fin nettoyage url en dur
Ajouts page par defaut erreurs 404,401,500 dans agmial_directory,pam,cam

[#213] Filtrer quote et retours chariots dans les formulaires
Filtre cot? client par javascript

26 lines of code changed in:

• Agmial2/pa_manager/web: .cvsignore (new 1), 403_error.html (new), file_not_found_error.html (new), login_error.html (new), main_intro.html (+1 -1), main_intro.html.in (new), main_menu.html (+6 -8), main_menu.html.in (new), server_error.html (new), web.xml.in (+18 -12)

vloux 2006-03-06 10:31

[#203] S?curit? : Single SignOn +Form based Login
PAM
[#213] Filtrer quote et retours chariots dans les formulaires
PAM

10 lines of code changed in:

• Agmial2/pa_manager/web: error.html (new), web.xml.in (+10 -3)

vloux 2006-02-24 15:58

AGMIAL Feature #197
Gestion liste

11 lines of code changed in:

• Agmial2/pa_manager/web: web.xml.in (+11)

vloux 2005-09-28 14:26

BugFixes
Removed generated web.xml from repository

0 lines of code changed in:

• Agmial2/pa_manager/web: web.xml (del)

vloux 2005-09-01 17:00

PAM Summer cleaning

DBPooling with apache dbpc and jni.

PAM refactoring :
moving all select/update/insert statement into proteindb package :

reader/HomologyAlignPanel.java OK(1)(2)
reader/HomologyImagePanel.java OK(1)(2)
reader/HomologyPanel.java OK(1)(2)

reader/ProteinPanel.java OK (1),(2)

reader/QueryDataSets.java OK(1)
reader/QueryProteins.java OK(1)
reader/QueryProteinSources.java OK(1)

reader/SearchDataSets.java OK
reader/SearchProteinSources.javaOK
reader/SearchResults.java TODO (Need to reorganize the search ->
will be done at that moment)


admin/MonitorProteinRefTasks.java OK(1),(3)
admin/MonitorProteinTasks.java OK(1)
admin/MonitorTasks.java OK(1)
admin/RetireProteins.java OK(1)
admin/ShowAddProteins.java OK
admin/ShowRetireProteins.java OK

control/AfterActionMotivation.java OK
control/DetermineFunctionAction.java OK(1)
control/HomologyResultsMotivation.java OK(1)
control/NotifyFunctionMotivation.java OK
control/ParalogResultsMotivation.java DELETED
control/ProteinActionMotivation.java OK
control/ProteinActionQueue.java OK
control/ProteinRefActionQueue.java OK
control/SwissAnnotAction.java OK

(1)new methods in ProteinDB
(2) new DTO classes
(3) new classes in proteinDB

112 lines of code changed in:

• Agmial2/pa_manager/web: context.xml.in (new), web.xml (+93 -38), web.xml.in (+19 -12)

vloux 2005-08-08 16:11

Move project-specific paths to web.xml

10 lines of code changed in:

• Agmial2/pa_manager/web: web.xml.in (+10)

vloux 2005-06-28 17:27

Raw Files access :
+ Url taken from project properties
+ Need to put a .xml file in TOMCAT_HOME/conf/Catalina/localhost/ (documented in agmial_user_guide).

5 lines of code changed in:

• Agmial2/pa_manager/web: web.xml.in (+5)

(10 more)