Directory BioTools/src/test/biotools/calc/

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vloux 2007-01-25 18:02

Tests
GOTermTable & AnnotTable implements Iteratable to permits "foreach" loop
HomologyMatchPair.Ontology enum comes with abbreviation and definition
Various fixes

5 lines of code changed in:

• BioTools/src/test/biotools/calc: BLASTTest.java (+3 -2), FROSTTest.java (+2 -2)

vloux 2006-10-31 16:43

Various test backbones
Added a test (BioToolsTest) that check the avalaibility of the executables described in ./biotool.props
Changed build.xml to run the proper test.
ATTN problem with Ant classloading -> ant must be launched with -lib and path to ant-junit.jar and junit.jar OR , in case of eclipse, those two modules have to be added on the ant classpath

70 lines of code changed in:

• BioTools/src/test/biotools/calc: INTERPROTest.java (+19 -6), SingleInOutTest.java (+51 -40)

vloux 2006-02-03 17:43

[#189]

Tests Biotools (encore du chemin ...)
Ajout fichiers input
Extension tests

Logging avec log4j

318 lines of code changed in:

• BioTools/src/test/biotools/calc: BLASTTest.java (+6), CDDTest.java (+14 -3), CalcPackageTest.java (new 53), FROSTTest.java (+12 -6), INTERPROCalcTest.java (+43 -34), INTERPROTest.java (+13 -4), PSORTTest.java (+4 -2), SingleInOutTest.java (new 157), TMHMMTest.java (+16 -5)

vloux 2006-02-01 16:39

Ajout Psort (Feature Request #188).
Modifs BioTools
Test basique sur sortie "long" Gram+ et Gram-

26 lines of code changed in:

• BioTools/src/test/biotools/calc: MEMSATTest.java (+5 -2), PSORTTest.java (+21)

vloux 2005-10-20 17:01

BugFixes :
#130 Bug Parsing CDD
#132 Passage ? Interpro V4

Ajouts de tests (en cours):
CDD
Interpro
memsat
psort

563 lines of code changed in:

• BioTools/src/test/biotools/calc: CDDTest.java (new 90), CoilCalcTest.java (new 78), FROSTTest.java (new 72), INTERPROCalcTest.java (new 80), INTERPROTest.java (new 71), MEMSATTest.java (new 57), PSORTTest.java (new 71), TMHMMTest.java (new 44)

vloux 2005-09-14 15:41

Package Reorganisation :
Tests in a separate folder but still belong to the same package.

150 lines of code changed in:

• BioTools/src/test/biotools/calc: BLASTTest.java (new 150)