Intron pattern of the yeast Arxula adeninivorans
The intron pattern was established on the basis of 902 introns detected in the coding
sequences of Arxula adeninivorans.
Distances
| intron | S1 | S2 |
| min | 19 | 1 | 0 |
| max | 901 | 881 | 49 |
| med | 51 | 33 | 2 |
avg |
87 | 69 | 2 |
Logo representation of 5', BP and 3'
Frequences of splice sites
| 5' motifs | gtaagt | gtgagt | gtatgt | gtaagc | gtaggt | gtaaga | gtacgt | gtaagg | gtcagt | gtgtgt | gtgcgt | gtatga | gtatgg |
| percentage | 52.3 | 11.8 | 7.3 | 5.4 | 4.9 | 4.7 | 3.9 | 2.4 | 1.1 | 1.0 | 0.9 | 0.9 | 0.7 |
| BP motifs | tactaac | tgctaac | ttctaac | agctaac | gactaac | aactaac | ggctaac | cgctaac | cactaac | tactaat | gtctaac | tattaac | ctctaac | tgctaat | tactgac | atctaac | aattaac | tgttaac | tgctgac | tcctaac |
| percentage | 26.9 | 16.1 | 8.9 | 6.1 | 5.5 | 5.3 | 3.9 | 3.9 | 3.1 | 3.0 | 2.7 | 2.5 | 2.0 | 1.8 | 1.6 | 1.4 | 0.8 | 0.7 | 0.7 | 0.6 |
| 3' motifs | tag | cag | aag | gag |
| percentage | 52.4 | 31.5 | 12.2 | 3.9 |
DNA logos were created using WEBLOGO version 2.8.1 (2004-10-18)