Intron pattern of the yeast Candida glabrata

The intron pattern was established on the basis of 105 introns detected in the coding sequences of Candida glabrata.

Distances

intronS1S2
min63380
max12971143471
med415176106
avg 446298132

Logo representation of 5', BP and 3'

Frequences of splice sites

5' motifsgtatgtgtacgtgtaagtgtgagtgtcagtgtatgctgttaagtatgggtatgagtatcagtaggt
percentage76.27.65.71.91.91.91.01.01.01.01.0

BP motifstactaactacttattactaattgctaatgactaacctctaacaattaacaactaacatataactgctaactcctaacatctaac
percentage66.75.74.83.83.83.83.82.91.91.01.01.0

3' motifscagtagaagatg
percentage56.234.38.61.0


DNA logos were created using WEBLOGO version 2.8.1 (2004-10-18)