Intron pattern of the yeast Candida parapsilosis
The intron pattern was established on the basis of 384 introns detected in the coding
sequences of Candida parapsilosis.
Distances
| intron | S1 | S2 |
| min | 48 | 0 | 0 |
| max | 2158 | 2127 | 85 |
| med | 68 | 40 | 10 |
avg |
141 | 115 | 10 |
Logo representation of 5', BP and 3'
Frequences of splice sites
| 5' motifs | gtatgt | gtacgt | gtaagt | gtatgc | gtttgt | gtacga | gttcgt | gtcagt | gtatga |
| percentage | 78.9 | 9.1 | 4.9 | 1.6 | 0.8 | 0.8 | 0.5 | 0.5 | 0.5 |
| BP motifs | tactaac | aactaac | tattaac | cactaac | gactaac | tactgac | ttctaac | tgctaac | tactaat | ggctaac | aactaat | acctaac |
| percentage | 81.0 | 4.7 | 2.6 | 2.6 | 1.6 | 1.3 | 1.0 | 1.0 | 0.8 | 0.8 | 0.8 | 0.5 |
| 3' motifs | tag | cag | aag | gag | agt |
| percentage | 68.0 | 20.3 | 10.7 | 0.8 | 0.3 |
DNA logos were created using WEBLOGO version 2.8.1 (2004-10-18)