Intron pattern of the yeast Debaryomyces hansenii
The intron pattern was established on the basis of 460 introns detected in the coding
sequences of Debaryomyces hansenii.
Distances
| intron | S1 | S2 |
| min | 42 | 20 | 0 |
| max | 807 | 786 | 179 |
| med | 75 | 51 | 7 |
avg |
132 | 109 | 7 |
Logo representation of 5', BP and 3'
Frequences of splice sites
| 5' motifs | gtatgt | gtaagt | gtacgt | gtgagt | gtaggt | gttcgt |
| percentage | 63.9 | 21.3 | 8.7 | 2.2 | 0.9 | 0.7 |
| BP motifs | tactaac | aactaac | tattaac | gactaac | tactaat | ttctaac | tgctaac | cactaac | tactgac | gattaac | atataac | aactaat |
| percentage | 65.2 | 8.7 | 6.1 | 4.6 | 2.8 | 2.4 | 2.0 | 1.3 | 0.7 | 0.7 | 0.7 | 0.7 |
| 3' motifs | tag | cag | aag | taa | gta | aat |
| percentage | 73.5 | 18.0 | 7.8 | 0.2 | 0.2 | 0.2 |
DNA logos were created using WEBLOGO version 2.8.1 (2004-10-18)