Intron pattern of the yeast Lachancea kluyveri
The intron pattern was established on the basis of 373 introns detected in the coding
sequences of Lachancea kluyveri.
Distances
| intron | S1 | S2 |
| min | 53 | 29 | 0 |
| max | 764 | 738 | 112 |
| med | 79 | 50 | 12 |
avg |
151 | 122 | 12 |
Logo representation of 5', BP and 3'
Frequences of splice sites
| 5' motifs | gtatgt | gtacgt | gtaagt | gtatgc | gtatga | gtgagt | gtatgg | gttagt | gtgtgc | gtaggt |
| percentage | 68.1 | 9.1 | 7.2 | 5.6 | 2.4 | 1.9 | 1.1 | 0.8 | 0.5 | 0.5 |
| BP motifs | tactaac | aactaac | tattaac | tactaat | cactaac | tactgac | gactaac | tgctaac | aactaat | ttctaac | aattaac | ttttaac | ttctaat | cgctaac | atctaac |
| percentage | 70.0 | 5.1 | 4.0 | 3.5 | 3.2 | 2.4 | 2.4 | 1.3 | 1.3 | 1.1 | 0.8 | 0.5 | 0.5 | 0.5 | 0.5 |
| 3' motifs | cag | tag | aag | gag |
| percentage | 64.1 | 27.9 | 7.8 | 0.3 |
DNA logos were created using WEBLOGO version 2.8.1 (2004-10-18)