Intron pattern of the yeast Lachancea thermotolerans

The intron pattern was established on the basis of 335 introns detected in the coding sequences of Lachancea thermotolerans.

Distances

intronS1S2
min48211
max978955124
med765010
avg 13611010

Logo representation of 5', BP and 3'

Frequences of splice sites

5' motifsgtatgtgtaagtgtacgtgtatgagtatgcgtatgggtttgtgttcgtgtgagtgtaagggcatgt
percentage60.611.39.06.03.02.70.90.90.60.60.6

BP motifstactaacaactaactgctaaccactaacgactaactactgactactaatttctaactattaactcctaacatctaacaactgacaactaatctctaacagctaac
percentage58.57.85.45.14.23.02.72.42.41.20.90.90.90.60.6

3' motifscagtagaaggag
percentage62.422.713.41.5


DNA logos were created using WEBLOGO version 2.8.1 (2004-10-18)