Intron pattern of the yeast Pichia sorbitophila
The intron pattern was established on the basis of 338 introns detected in the coding
sequences of Pichia sorbitophila.
Distances
| intron | S1 | S2 |
| min | 49 | 27 | 0 |
| max | 874 | 849 | 19 |
| med | 90 | 68 | 5 |
avg |
138 | 117 | 5 |
Logo representation of 5', BP and 3'
Frequences of splice sites
| 5' motifs | gtaagt | gtatgt | gtacgt | gtgagt | gtttgt | gttcgt | gtatgc | gtaact | gtaaat |
| percentage | 46.4 | 40.2 | 6.5 | 2.1 | 0.6 | 0.6 | 0.6 | 0.6 | 0.6 |
| BP motifs | tactaac | aactaac | tgctaac | gactaac | tactaat | tactgac | ttctaac | cactaac | tattaac | aactaat | atctaac | tcctaac | ggctaac | cgctaac |
| percentage | 63.9 | 7.1 | 5.0 | 4.7 | 3.6 | 2.7 | 2.4 | 2.4 | 2.1 | 1.5 | 1.2 | 0.6 | 0.6 | 0.6 |
| 3' motifs | tag | cag | aag |
| percentage | 57.1 | 30.2 | 12.7 |
DNA logos were created using WEBLOGO version 2.8.1 (2004-10-18)