Intron pattern of the yeast Saccharomyces cerevisiae
The intron pattern was established on the basis of 280 introns detected in the coding
sequences of Saccharomyces cerevisiae.
Distances
| intron | S1 | S2 |
| min | 52 | 23 | 1 |
| max | 1002 | 947 | 151 |
| med | 141 | 96 | 28 |
avg |
236 | 189 | 31 |
Logo representation of 5', BP and 3'
Frequences of splice sites
| 5' motifs | gtatgt | gtacgt | gtaagt | gtatga | gtatgc | gcatgt | gttcgt | gtgagt | gtcagt |
| percentage | 72.5 | 9.3 | 4.6 | 3.6 | 2.9 | 2.9 | 0.7 | 0.7 | 0.7 |
| BP motifs | tactaac | gactaac | aactaac | cactaac | tattaac | tactgac | tactaat | aattaac | tgctaac | aactaat | ttctaat | tgctaat | tacttat | acctaat |
| percentage | 73.2 | 4.3 | 4.3 | 2.5 | 1.4 | 1.4 | 1.4 | 1.4 | 1.1 | 1.1 | 0.7 | 0.7 | 0.7 | 0.7 |
| 3' motifs | tag | cag | aag | ccg |
| percentage | 51.8 | 43.6 | 4.3 | 0.4 |
DNA logos were created using WEBLOGO version 2.8.1 (2004-10-18)