Intron pattern of the yeast Yarrowia lipolytica
The intron pattern was established on the basis of 1079 introns detected in the coding
sequences of Yarrowia lipolytica.
Distances
| intron | S1 | S2 |
| min | 41 | 21 | 0 |
| max | 3478 | 3461 | 555 |
| med | 204 | 187 | 1 |
avg |
281 | 263 | 1 |
Logo representation of 5', BP and 3'
Frequences of splice sites
| 5' motifs | gtgagt | gtaagt | gtgggt | gtatgt |
| percentage | 86.8 | 6.3 | 1.6 | 1.3 |
| BP motifs | tactaac | aactaac | cactaac | tgctaac | gactaac | ttctaac | cgctaac | agctaac | atctaac | ggctaac | ctctaac | tactaat | tattaac | ccctaac | acctaac | tcctaac |
| percentage | 43.2 | 12.7 | 9.5 | 6.9 | 6.3 | 4.8 | 4.8 | 2.8 | 1.6 | 1.1 | 1.1 | 0.9 | 0.8 | 0.6 | 0.6 | 0.6 |
| 3' motifs | cag | tag | aag | gag |
| percentage | 86.1 | 10.3 | 3.1 | 0.6 |
DNA logos were created using WEBLOGO version 2.8.1 (2004-10-18)