download the pdf version of the documentation

download the C++ SHOW source code, easy to compile under UNIX/LINUX environments.

SHOW comes with bactgeneSHOW a fully featured bacterial gene prediction software. It includes a fully unsupervised training in Maximum-Likelihood framework and scores the predictions according to the underlying HMM. This program served to predict the CDSs in two recently published Lactobacillus genomes: L. sakei (Chaillou et al., Nat. Biotech. 2005) and L. bulgaricus (van de Guchte et al., PNAS 2006). It is also included in AGMIAL annotation chain (Bryson et al., NAR 2006).