Sélections par mots-clés
(Selections by key-words)
Papiers lus
(accès réservé / Private)

Références bibliographiques / Bibliography


Mot-clé: alignment

[1] Altschul, S. F., and Erickson, B. W. Significance of nucleotide sequence alignments : A method for random sequence permutation that preserves dinucleotide and codon usage. Mol. Biol. Evol. 2 (1985), 526-538.

[2] Arratia, R., Gordon, L., and Waterman, M. S. The Erdös-Rényi law in distribution, for coin tossing and sequence matching. Ann. Statist. 18 (1990), 539-570.

[3] Arratia, R., and Waterman, M. S. The Erdös-Rényi strong law for pattern matching with a given porportion of mismatches. Ann. Prob. 17 (1989), 1152-1169.

[4] Bundschuh, R., and Hwa, T. An Analytical Study of the Phase Transition Line in Local Sequence Alignment with Gaps. Recomb 99, Proc. of the third Ann. Internatnl. Conf. on Comp. Mol. Biol. (1999), 70-76.

[5] Goldstein, L., and Waterman, M. S. Poisson, compound poisson and process approximations for testing statistical significance in sequence comparisons. Bull. Math. Biol 54 (1992), 785-812.

[6] Karlin, S., and Altschul, S. F. Methods for assessing the statistical significance of molecular sequence features by using general scoring schemes. Proc. Natl. Acad. Sci. USA 87 (1990), 2264-2268.

[7] Karlin, S., and Ost, F. Counts of long aligned word matches among random letter sequences. Ann. Prob. 19 (1987), 293-351.

[8] Karlin, S., and Ost, F. Maximal length of common words among random letter sequences. Ann. Prob. 16 (1988), 535-563.

[9] Mott, R. Maximum-likelihood estimation of the statistical distribution of Smith-Waterman local sequence similarity scores. BMB (1992), 59-75.

[10] Mott, R., and Tribes, R. Approximate Statistics of Gapped Alignments. JCB 6, 1 (1999), 91-112.

[11] Nicodème, P. SSMAL: similarity searching with alignment graphs. Bioinformatics 14, 6 (1998), 508-515.

[12] Olsen, R., Bundschuh, R., and Hwa, T. Rapid Assessment of Extremal Statistics for Gapped Local Alignment. American Association for Artificial Intelligence (1999), ?

Fri Feb 11 09:39:23 MET 2000

Retour à la liste