vers la météo de la validation par utilisateur
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+-------OBJ:V-N-------+ | +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) OBJ:V-N (performing,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ | +----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+----------SUBJ:V-N---------+ +---------------MOD_ATT:N-N--------------+ | +------------OBJ:V-N------------+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+ | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+----------SUBJ:V-N---------+ +---------------MOD_ATT:N-N--------------+ +------------------------COMP_by:V-N------------------------+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +---------MOD_ATT:N-ADJ---------+ | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (assays,performing)
+------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted)
+----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+ +----COMP_of:N-N----+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+ | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (assays,transcription) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_ATT:N-N (promoter,GENEXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------COMP_by:V-N------------------------+ | | +------------------------OBJ:V-N-----------------------+ | +---------MOD_ATT:N-ADJ---------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_with:V-N (tested,set) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (assays,performing) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ +----COMP_of:N-N----+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+ | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +------------OBJ:V-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) MOD_ATT:N-N (regions,promoter) OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +---------------MOD_ATT:N-N--------------+ | +------------OBJ:V-N------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +---------------MOD_ATT:N-N--------------+ +------------------------COMP_by:V-N------------------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +----MOD_ATT:N-ADJ----+ | | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-ADJ (transcription,performing) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +---------------MOD_ATT:N-N--------------+ | +------------OBJ:V-N------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+-------OBJ:V-N-------+ | | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) SUBJ:V-N (containing,set) OBJ:V-N (performing,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,transcription) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +----MOD_ATT:N-ADJ----+ | | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:V-N (tested,set) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-ADJ (transcription,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +----MOD_ATT:N-ADJ----+ | | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:V-N (tested,set) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-ADJ (transcription,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------OBJ:V-N-----------------------+ +-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+-------COMP_with:N-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +----MOD_ATT:N-ADJ----+ +-------COMP_with:N-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-ADJ (transcription,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------COMP_by:V-N------------------------+ +------------------------OBJ:V-N-----------------------+ | +---------MOD_ATT:N-ADJ---------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +------------------COMP_of:N-N-----------------+ | +---------------MOD_ATT:N-N--------------+ +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (assays,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro)
+-------------COMP_with:N-N------------+ +------------------------OBJ:V-N-----------------------+ | +----------SUBJ:V-N---------+ +---------------MOD_ATT:N-N--------------+ +------------OBJ:V-N------------+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+ +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------SUBJ:V-N-----------------------+------------------------OBJ:V-N-----------------------+ +-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+-------COMP_with:N-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,assays) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+ +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +-----------------COMP_by:N-N-----------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +----MOD_ATT:N-ADJ----+ | +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-ADJ (transcription,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ | +----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ | +------------OBJ:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+ +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+ +----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) MOD_ATT:N-N (regions,promoter) OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted)
+------------------------OBJ:V-N-----------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------OBJ:V-N-------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+ +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------SUBJ:V-N-----------------------+ +------------------COMP_of:N-N-----------------+ +------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +---------MOD_ATT:N-ADJ---------+-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,assays) COMP_of:N-N (assays,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +-----------------COMP_by:N-N-----------------+ +----------SUBJ:V-N---------+ +---------------MOD_ATT:N-N--------------+ | | +---------MOD_ATT:N-ADJ---------+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-ADJ (assays,performing) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+----------SUBJ:V-N---------+ +---------------MOD_ATT:N-N--------------+ +------------------------COMP_by:V-N------------------------+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +----MOD_ATT:N-ADJ----+ | | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-ADJ (transcription,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +---------------MOD_ATT:N-N--------------+ | +------------OBJ:V-N------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+ +----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +----------SUBJ:V-N---------+-------------------OBJ:V-N-------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +----MOD_ATT:N-ADJ----+ | +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-N (tested,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-ADJ (transcription,performing) COMP_of:N-N (set,SPXXX)
+-------------------------------------------------------------------OBJ:V-N-------------------------------------------------------------------+ | +-------------------OBJ:V-N-------------------+ | +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+-------OBJ:V-N-------+ +-------COMP_with:N-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) SUBJ:V-N (containing,SPXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,transcription) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX) OBJ:V-N (performing,regions)
+-------------COMP_with:N-N------------+ | +----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ | +----COMP_of:N-N----+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------COMP_of:N-N-----------------+ +------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+-------OBJ:V-N-------+ +-------COMP_with:N-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+ | +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) OBJ:V-N (performing,assays) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (assays,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (performing,transcription) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------COMP_with:N-N------------+ +------------------------COMP_by:V-N------------------------+ +----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ | +---------MOD_ATT:N-ADJ---------+ +----COMP_of:N-N----+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------SUBJ:V-N-----------------------+------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+-------COMP_with:N-N------+----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) SUBJ:V-N (containing,assays) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ | +----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+----COMP_of:N-N----+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (regions,promoter) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX)
+-----------------------SUBJ:V-N-----------------------+ +------------------COMP_of:N-N-----------------+ +------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) OBJ:V-N (performing,assays) SUBJ:V-N (containing,assays) COMP_of:N-N (assays,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX)
+-----------------------SUBJ:V-N-----------------------+------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+-------OBJ:V-N-------+ +-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,assays) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,transcription) OBJ:V-N (tested,hypothesis) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (regions,promoter) OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_ATT:N-N (promoter,GENEXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +---------------MOD_ATT:N-N--------------+ | +------------OBJ:V-N------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-----------------------SUBJ:V-N-----------------------+------------------------OBJ:V-N-----------------------+ +-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) OBJ:V-N (performing,assays) SUBJ:V-N (containing,assays) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------COMP_by:V-N------------------------+-----------------------SUBJ:V-N-----------------------+------------------------OBJ:V-N-----------------------+ | +---------MOD_ATT:N-ADJ---------+-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) SUBJ:V-N (containing,assays) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (regions,promoter) OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted)
+------------------------OBJ:V-N-----------------------+ +--------------------------------------------COMP_by:V-N-------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +------------------------COMP_by:V-N------------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +----MOD_ATT:N-ADJ----+ +-------COMP_with:N-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-ADJ (transcription,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_by:V-N (tested,set) COMP_of:N-N (set,SPXXX)
+--------------------------------------------COMP_by:V-N-------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +---------MOD_ATT:N-ADJ---------+-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-ADJ (assays,performing) MOD_ATT:N-N (assays,transcription) COMP_by:V-N (tested,set) COMP_of:N-N (set,SPXXX)
+-------------------------------------------------------------------OBJ:V-N-------------------------------------------------------------------+ | +-------------------OBJ:V-N-------------------+ | +--------------------------------OBJ:V-N-------------------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,set) COMP_in:ADJ-N (transcription,vitro) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX) OBJ:V-N (performing,regions)
+------------------------OBJ:V-N-----------------------+ +--------------------------------OBJ:V-N-------------------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,set) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +--------------------------------OBJ:V-N-------------------------------+ | +---------------MOD_ATT:N-N--------------+ +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) OBJ:V-N (performing,assays) OBJ:V-N (performing,set) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+--------------------------------------------COMP_by:V-N-------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +----MOD_ATT:N-ADJ----+ +-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-ADJ (transcription,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_by:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+--------------------------------OBJ:V-N-------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) OBJ:V-N (performing,assays) OBJ:V-N (performing,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+--------------------------------OBJ:V-N-------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+-------OBJ:V-N-------+ +-------COMP_with:N-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) OBJ:V-N (performing,assays) COMP_in:ADJ-N (transcription,vitro) OBJ:V-N (performing,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (performing,transcription) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+-------------------------------------------------------------------OBJ:V-N-------------------------------------------------------------------+ | +-------------------OBJ:V-N-------------------+ | | +-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (performing,regions)
+------------------------OBJ:V-N-----------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (regions,promoter) OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) SUBJ:V-N (containing,set) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) SUBJ:V-N (containing,set) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) MOD_ATT:N-N (regions,promoter) OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) SUBJ:V-N (containing,set) MOD_ATT:N-N (regions,promoter) OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +---------------MOD_ATT:N-N--------------+ | +-----------------COMP_by:N-N-----------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +----MOD_ATT:N-ADJ----+ | | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-ADJ (transcription,performing) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +---------MOD_ATT:N-ADJ---------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-N (tested,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (assays,performing)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------COMP_by:V-N------------------------+ | | +------------------------OBJ:V-N-----------------------+ | +---------MOD_ATT:N-ADJ---------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_by:V-N (tested,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-ADJ (assays,performing) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +-------------------OBJ:V-N-------------------+ | | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +---------MOD_ATT:N-ADJ---------+ | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:V-N (tested,set) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (assays,performing)
+------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+-------COMP_with:N-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+-------OBJ:V-N-------+ +-------COMP_with:N-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (performing,transcription) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+-------COMP_with:N-N------+----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+ +----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted)
+------------------------OBJ:V-N-----------------------+ +------------------COMP_of:N-N-----------------+ | +---------------MOD_ATT:N-N--------------+ +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (assays,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro)
+------------------COMP_of:N-N-----------------+ +------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------OBJ:V-N-------+ +-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (assays,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,transcription) OBJ:V-N (tested,hypothesis)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------COMP_with:N-N------------+ | +----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ | +----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (assays,transcription) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +---------------MOD_ATT:N-N--------------+ +------------------------------COMP_with:N-N-----------------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ +----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------SUBJ:V-N-----------------------+------------------------OBJ:V-N-----------------------+ +-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:N-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,assays) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+ | +---------------MOD_ATT:N-N--------------+ | +---------MOD_ATT:N-ADJ---------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------COMP_with:N-N------------+ +------------------------OBJ:V-N-----------------------+ | +----------SUBJ:V-N---------+ +---------------MOD_ATT:N-N--------------+ +-----------------COMP_by:N-N-----------------+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +---------MOD_ATT:N-ADJ---------+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------COMP_by:N-N-----------------+------------------COMP_of:N-N-----------------+ +------------------------OBJ:V-N-----------------------+ | +---------MOD_ATT:N-ADJ---------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (assays,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) COMP_in:ADJ-N (assays,vitro)
+------------------------OBJ:V-N-----------------------+ +-----------------------SUBJ:V-N-----------------------+ +---------------MOD_ATT:N-N--------------+ +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,assays) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+ +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted)
+-------------COMP_with:N-N------------+ +------------------------OBJ:V-N-----------------------+ | +----------SUBJ:V-N---------+ +---------------MOD_ATT:N-N--------------+ +------------------------COMP_by:V-N------------------------+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +----MOD_ATT:N-ADJ----+ +-------COMP_with:N-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-ADJ (transcription,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------COMP_with:V-N------------+ | +----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ | +----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_with:V-N (assays,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) COMP_with:V-N (assays,GENEXXX) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------------COMP_with:N-N-----------------------------+----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ +----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) COMP_by:N-V (hypothesis,performing) COMP_in:ADJ-N (assays,vitro) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | +---------------MOD_ATT:N-N--------------+ | +-------------COMP_with:N-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX)
+------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+ +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (regions,promoter) OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+----------SUBJ:V-N---------+ +---------------MOD_ATT:N-N--------------+ | +------------OBJ:V-N------------+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +-------OBJ:V-N-------+ +-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,assays) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,transcription) OBJ:V-N (tested,hypothesis) COMP_of:N-N (hypothesis,SPXXX)
+------------------------OBJ:V-N-----------------------+ +------------------COMP_of:N-N-----------------+ +-------------------OBJ:V-N-------------------+ | +-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (assays,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX)
+-----------------------SUBJ:V-N-----------------------+------------------------OBJ:V-N-----------------------+ +------------------COMP_of:N-N-----------------+ | +---------------MOD_ATT:N-N--------------+ +-------------COMP_with:N-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | | | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,assays) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (assays,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX)
+-----------------------SUBJ:V-N-----------------------+------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +----MOD_ATT:N-ADJ----+ +-------COMP_with:N-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,assays) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-ADJ (transcription,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +------------------COMP_of:N-N-----------------+ +-------------------OBJ:V-N-------------------+ | +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (assays,SPXXX) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (assays,vitro)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ +----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------OBJ:V-N-------+ | | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) OBJ:V-N (performing,assays) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) OBJ:V-N (performing,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +----------SUBJ:V-N---------+-------------------OBJ:V-N-------------------+ | +------------OBJ:V-N------------+ +----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+----------SUBJ:V-N---------+ +---------------MOD_ATT:N-N--------------+ +-----------------COMP_by:N-N-----------------+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +---------MOD_ATT:N-ADJ---------+ | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (assays,performing)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------------COMP_with:N-N-----------------------------+ | +-----------------COMP_by:N-N-----------------+ +----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ | +---------MOD_ATT:N-ADJ---------+ +----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-ADJ (assays,performing) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------SUBJ:V-N----------------------------------------------+ +---------------MOD_ATT:N-N--------------+ | +-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:N-N------+----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX)
+-----------------------SUBJ:V-N-----------------------+------------------------OBJ:V-N-----------------------+ +------------------COMP_of:N-N-----------------+ | +---------------MOD_ATT:N-N--------------+ +-------------COMP_with:N-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | | | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,assays) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (assays,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +-------------------OBJ:V-N-------------------+ | | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+ +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ +----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ | +-----------------COMP_by:N-N-----------------+ +----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +----MOD_ATT:N-ADJ----+ | | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-ADJ (transcription,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +---------------MOD_ATT:N-N--------------+ +------------------------COMP_by:V-N------------------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +----------MOD_ATT:N-N----------+ +----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:V-N (tested,GENEXXX) MOD_ATT:N-N (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +------------------COMP_of:N-N-----------------+ +-------------------OBJ:V-N-------------------+ | +------------------------COMP_by:V-N------------------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +---------MOD_ATT:N-ADJ---------+-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (assays,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (containing,promoter) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX)
+-----------------------SUBJ:V-N-----------------------+ +------------------COMP_of:N-N-----------------+ +------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+-------OBJ:V-N-------+ +-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+ | +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,assays) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (assays,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,transcription) OBJ:V-N (tested,hypothesis)
+-----------------------SUBJ:V-N-----------------------+------------------------OBJ:V-N-----------------------+ +------------------COMP_of:N-N-----------------+ | +---------------MOD_ATT:N-N--------------+ +-----------------COMP_by:N-N-----------------+-------------COMP_with:N-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +---------MOD_ATT:N-ADJ---------+-------COMP_with:N-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | | | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,assays) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (assays,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_in:ADJ-N (assays,vitro)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------OBJ:V-N-------+ | +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) OBJ:V-N (performing,transcription) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +-------------------OBJ:V-N-------------------+ | | +-----------------COMP_by:N-N-----------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---------MOD_ATT:N-ADJ---------+ +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (assays,performing)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ | +------------------COMP_of:N-N-----------------+ +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (assays,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) COMP_in:ADJ-N (assays,vitro)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +----------SUBJ:V-N---------+ +---------------MOD_ATT:N-N--------------+ +-------------------------------------COMP_with:V-N------------------------------------+----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ | +------------------COMP_of:N-N-----------------+ | +---------------MOD_ATT:N-N--------------+ | +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ | | | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (assays,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,hypothesis) COMP_in:ADJ-N (assays,vitro)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------SUBJ:V-N-----------------------+------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+------------------COMP_of:N-N-----------------+ | +---------------MOD_ATT:N-N--------------+ | +---------MOD_ATT:N-ADJ---------+-------------COMP_with:N-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ | | | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,assays) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (assays,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +-----------------COMP_by:N-N-----------------+ | | | +------------------------OBJ:V-N-----------------------+ | +---------MOD_ATT:N-ADJ---------+ | | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_of:N-N (hypothesis,SPXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-ADJ (assays,performing)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ | +------------------COMP_of:N-N-----------------+ +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +----MOD_ATT:N-ADJ----+ +-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (assays,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-ADJ (transcription,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ | +------------------COMP_of:N-N-----------------+ | +---------------MOD_ATT:N-N--------------+ +-----------------COMP_by:N-N-----------------+-------------COMP_with:N-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +---------MOD_ATT:N-ADJ---------+-------COMP_with:N-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | | | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (assays,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,hypothesis)
+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ | +----------------------------------------------SUBJ:V-N----------------------------------------------+ +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | +---------------MOD_ATT:N-N--------------+ +-----------------COMP_by:N-N-----------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +----MOD_ATT:N-ADJ----+ | +----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-ADJ (transcription,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------------------------------OBJ:V-N-------------------------------------------------------------------+ | +------------------COMP_of:N-N-----------------+ +-------------------OBJ:V-N-------------------+ | +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------OBJ:V-N-------+ +-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (assays,SPXXX) COMP_in:ADJ-N (transcription,vitro) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (performing,transcription) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,regions)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX)
+-------------------------------------------------------------------OBJ:V-N-------------------------------------------------------------------+ | +-------------COMP_with:N-N------------+ | | | +----------SUBJ:V-N---------+-------------------OBJ:V-N-------------------+ | +------------OBJ:V-N------------+ +----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,set) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (performing,regions)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | +---------------MOD_ATT:N-N--------------+ | +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +-------OBJ:V-N-------+ +-------COMP_with:N-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ | | | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (performing,transcription) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,hypothesis) COMP_of:N-N (hypothesis,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +----MOD_ATT:N-ADJ----+ +-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-ADJ (transcription,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX)
+-------------------------------------------------------------------OBJ:V-N-------------------------------------------------------------------+ | +------------------COMP_of:N-N-----------------+ +-------------------OBJ:V-N-------------------+ | +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+-------OBJ:V-N-------+ +-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+ | +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (assays,SPXXX) COMP_in:ADJ-N (transcription,vitro) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (performing,transcription) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,regions)
+------------------------------------------------OBJ:V-N------------------------------------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+ | +-------------------OBJ:V-N-------------------+ | +------------------------COMP_by:V-N------------------------+ | | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +----MOD_ATT:N-ADJ----+ | | +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-N (tested,assays) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) COMP_with:V-N (tested,set) SUBJ:V-N (containing,SPXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (with,regions) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-ADJ (transcription,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------------------------------OBJ:V-N------------------------------------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ | | | +----------SUBJ:V-N---------+-------------------OBJ:V-N-------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+ | | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) SUBJ:V-N (containing,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,set) OBJ:V-N (with,regions) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (regions,promoter) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------------------------------OBJ:V-N------------------------------------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+----------SUBJ:V-N---------+-------------------OBJ:V-N-------------------+ | | +------------OBJ:V-N------------+ | +----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+ | | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) SUBJ:V-N (containing,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,set) OBJ:V-N (with,regions) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | +---------------MOD_ATT:N-N--------------+ | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (regions,promoter) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (regions,GENEXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | +------------------------------------COMP_with:N-N-----------------------------------+ | +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | | +---------------MOD_ATT:N-N--------------+ | +------------OBJ:V-N------------+ | | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ | | | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_of:N-N (hypothesis,SPXXX) OBJ:V-N (performing,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_in:ADJ-N (assays,vitro)
+-------------------------------------------------------------------OBJ:V-N-------------------------------------------------------------------+ | +-----------------------SUBJ:V-N-----------------------+ | | +------------------COMP_of:N-N-----------------+ +-------------------OBJ:V-N-------------------+ | +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+-------OBJ:V-N-------+ +-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+ | +MOD_ATT:N-+ | | | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,assays) COMP_of:N-N (assays,SPXXX) COMP_in:ADJ-N (transcription,vitro) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) OBJ:V-N (performing,transcription) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,regions)
+------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------OBJ:V-N-------+ +-------COMP_with:N-N------+----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (performing,transcription) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +---------MOD_ATT:N-ADJ---------+-------COMP_with:N-N------+----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------SUBJ:V-N-----------------------+------------------------OBJ:V-N-----------------------+ +-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:N-N------+----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) SUBJ:V-N (containing,assays) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------COMP_with:N-N------------+ | +----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+ +----COMP_of:N-N----+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+-------OBJ:V-N-------+ +-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (performing,transcription) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------SUBJ:V-N-----------------------+------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) SUBJ:V-N (containing,assays) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------SUBJ:V-N-----------------------+------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------OBJ:V-N-------+ +-------COMP_with:N-N------+----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) SUBJ:V-N (containing,assays) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (performing,transcription) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------COMP_of:N-N-----------------+ +------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+-------------COMP_with:N-N------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +---------MOD_ATT:N-ADJ---------+-------COMP_with:N-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (assays,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX)
+----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ +----COMP_of:N-N----+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX) COMP_of:N-N (GENEXXX,SPXXX)
+------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (regions,promoter) OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) OBJ:V-N (tested,hypothesis) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +-----------------COMP_by:N-N-----------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +---------MOD_ATT:N-ADJ---------+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (tested,set) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (assays,performing)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ +----COMP_of:N-N----+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+ | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+-------------COMP_with:N-N------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +---------MOD_ATT:N-ADJ---------+-------COMP_with:N-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-ADJ (assays,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX)
+-----------------------SUBJ:V-N-----------------------+ +------------------COMP_of:N-N-----------------+ +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+-------------COMP_with:N-N------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +----MOD_ATT:N-ADJ----+ +-------COMP_with:N-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) SUBJ:V-N (containing,assays) COMP_of:N-N (assays,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-ADJ (transcription,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------COMP_by:V-N------------------------+-----------------------SUBJ:V-N-----------------------+------------------------OBJ:V-N-----------------------+ | +---------MOD_ATT:N-ADJ---------+-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,assays) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_in:ADJ-N (assays,vitro) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+-----------------------SUBJ:V-N-----------------------+ +------------------COMP_of:N-N-----------------+ +------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+-------------COMP_with:N-N------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +----MOD_ATT:N-ADJ----+ +-------COMP_with:N-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) SUBJ:V-N (containing,assays) COMP_of:N-N (assays,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-ADJ (transcription,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +-----------------COMP_by:N-N-----------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +----MOD_ATT:N-ADJ----+ | +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:V-N (tested,set) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-ADJ (transcription,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ | +------------------COMP_of:N-N-----------------+ +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +-------OBJ:V-N-------+ +-------COMP_with:N-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (assays,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (performing,transcription) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_with:N-N (hypothesis,GENEXXX) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +-------------------OBJ:V-N-------------------+ +----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ | +------MOD_POST:N-ADJ-----+ | +----COMP_of:N-N----+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ | | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) SUBJ:V-N (containing,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,set) MOD_POST:N-ADJ (hypothesis,vitro) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) COMP_in:N-N (hypothesis,vitro)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | +------------------------------------COMP_with:N-N-----------------------------------+ | | +------------------------------COMP_with:N-N-----------------------------+ | | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +-------OBJ:V-N-------+ | | | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_of:N-N (hypothesis,SPXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) OBJ:V-N (performing,transcription) COMP_with:N-N (hypothesis,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX)
+-----------------------SUBJ:V-N-----------------------+------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +----MOD_ATT:N-ADJ----+ +-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,assays) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-ADJ (transcription,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------OBJ:V-N-------+ | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (performing,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +----------------------------------------------SUBJ:V-N----------------------------------------------+ | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (regions,promoter) OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-----------------------SUBJ:V-N-----------------------+-------------------OBJ:V-N-------------------+ | +------------------------COMP_by:V-N------------------------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +---------MOD_ATT:N-ADJ---------+-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,assays) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) OBJ:V-N (containing,promoter) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +-----------------COMP_by:N-N-----------------+ | | +------------------------OBJ:V-N-----------------------+ | | +---------MOD_ATT:N-ADJ---------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (assays,performing) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +---------------MOD_ATT:N-N--------------+ +------------------------------COMP_with:N-N-----------------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------OBJ:V-N-------+ +-------COMP_with:N-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (performing,transcription) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +-------OBJ:V-N-------+ | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) OBJ:V-N (performing,transcription) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------OBJ:V-N-------+ +-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,assays) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,transcription) OBJ:V-N (tested,hypothesis) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------OBJ:V-N-------+ +-------COMP_with:N-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (performing,transcription) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---------MOD_ATT:N-ADJ---------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (assays,performing)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ | +-----------------COMP_by:N-N-----------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +----MOD_ATT:N-ADJ----+ +-------COMP_with:N-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-ADJ (transcription,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,assays) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------SUBJ:V-N----------------------------------------------+-------------------OBJ:V-N-------------------+ | | +------------OBJ:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (tested,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (tested,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +---------------MOD_ATT:N-N--------------+ | | +------------OBJ:V-N------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +-------OBJ:V-N-------+ | | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) OBJ:V-N (performing,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ | | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_in:ADJ-N (assays,vitro) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ | +----------------------------------------------OBJ:V-N---------------------------------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +---------------MOD_ATT:N-N--------------+ | +-----------------COMP_by:N-N-----------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +----MOD_ATT:N-ADJ----+ | | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-ADJ (transcription,performing) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ | +-----------------COMP_by:N-N-----------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +----MOD_ATT:N-ADJ----+ | | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-ADJ (transcription,performing) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ +-------------------OBJ:V-N-------------------+ | | +------------OBJ:V-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +---------------MOD_ATT:N-N--------------+ | +-----------------COMP_by:N-N-----------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +---------MOD_ATT:N-ADJ---------+ | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (assays,performing)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ | +-----------------COMP_by:N-N-----------------+ | | | +---------------MOD_ATT:N-N--------------+ | | +---------MOD_ATT:N-ADJ---------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-ADJ (assays,performing) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-----------------------SUBJ:V-N-----------------------+------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +---------MOD_ATT:N-ADJ---------+-------COMP_with:N-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) SUBJ:V-N (containing,assays) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------OBJ:V-N-------+ | | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (performing,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------SUBJ:V-N----------------------------------------------+ +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (regions,promoter) OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------COMP_by:N-N-----------------+ +------------------------OBJ:V-N-----------------------+ | +---------MOD_ATT:N-ADJ---------+-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ | +--------------------------------OBJ:V-N-------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +-------OBJ:V-N-------+ +-------COMP_with:N-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) OBJ:V-N (performing,set) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (performing,transcription) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ | +--------------------------------OBJ:V-N-------------------------------+ | +---------------MOD_ATT:N-N--------------+ | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) OBJ:V-N (performing,set) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------OBJ:V-N-------+ +-------COMP_with:N-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (performing,transcription) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +-----------------COMP_by:N-N-----------------+ | +------------------------OBJ:V-N-----------------------+ | | +---------MOD_ATT:N-ADJ---------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) OBJ:V-N (performing,assays) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-----------------COMP_by:N-N-----------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +---------MOD_ATT:N-ADJ---------+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-ADJ (assays,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ | | +------------OBJ:V-N------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_in:ADJ-N (assays,vitro) COMP_with:N-N (hypothesis,GENEXXX) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (tested,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ | +-----------------COMP_by:N-N-----------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +----MOD_ATT:N-ADJ----+ | | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-ADJ (transcription,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (tested,set) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ | | +------------OBJ:V-N------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_in:ADJ-N (assays,vitro) COMP_with:N-N (hypothesis,GENEXXX) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ | +-----------------COMP_by:N-N-----------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +---------MOD_ATT:N-ADJ---------+ | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (assays,performing)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ | +--------------------------------OBJ:V-N-------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) OBJ:V-N (performing,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +-----------------COMP_by:N-N-----------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +----MOD_ATT:N-ADJ----+ +-------COMP_with:N-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-ADJ (transcription,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+--------------------------------------------COMP_by:V-N-------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +----MOD_ATT:N-ADJ----+ +-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-ADJ (transcription,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_by:V-N (tested,set) COMP_of:N-N (set,SPXXX)
+-------------------------------------COMP_by:N-N------------------------------------+ +-----------------COMP_by:N-N-----------------+ | +------------------------OBJ:V-N-----------------------+ | +---------MOD_ATT:N-ADJ---------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:N-N (hypothesis,set) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-------------------------------------COMP_by:N-N------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | +---------------MOD_ATT:N-N--------------+ | +---------MOD_ATT:N-ADJ---------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_by:N-N (hypothesis,set) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +--------------------------------------------COMP_by:V-N-------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +------------------------COMP_by:V-N------------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +---------MOD_ATT:N-ADJ---------+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-ADJ (assays,performing) MOD_ATT:N-N (assays,transcription) COMP_by:V-N (tested,set) COMP_of:N-N (set,SPXXX)
+--------------------------------------------COMP_by:V-N-------------------------------------------+ +------------------------COMP_by:V-N------------------------+ | +------------------------OBJ:V-N-----------------------+ | +---------MOD_ATT:N-ADJ---------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_by:V-N (tested,set) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +--------------------------------------------COMP_by:V-N-------------------------------------------+ +-------------------OBJ:V-N-------------------+ | +------------------------COMP_by:V-N------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +---------MOD_ATT:N-ADJ---------+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-ADJ (assays,performing) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_by:V-N (tested,set) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | | +--------------------------------OBJ:V-N-------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_in:ADJ-N (assays,vitro) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX)
+------------------------OBJ:V-N-----------------------+ +--------------------------------OBJ:V-N-------------------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,set) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +--------------------------------OBJ:V-N-------------------------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) OBJ:V-N (performing,assays) OBJ:V-N (performing,set) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-------------------------------------COMP_by:N-N------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +----MOD_ATT:N-ADJ----+ +-------COMP_with:N-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-ADJ (transcription,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------OBJ:V-N-----------------------+ +--------------------------------OBJ:V-N-------------------------------+ | +---------------MOD_ATT:N-N--------------+ +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) OBJ:V-N (performing,assays) OBJ:V-N (performing,set) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-------------------------------------COMP_by:N-N------------------------------------+ +-----------------COMP_by:N-N-----------------+ | +------------------------OBJ:V-N-----------------------+ | +---------MOD_ATT:N-ADJ---------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_by:N-N (hypothesis,set) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+--------------------------------------------COMP_by:V-N-------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +----MOD_ATT:N-ADJ----+ +-------COMP_with:N-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-ADJ (transcription,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_by:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+--------------------------------------------COMP_by:V-N-------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +---------MOD_ATT:N-ADJ---------+-------COMP_with:N-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-ADJ (assays,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_by:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------OBJ:V-N-----------------------+ +--------------------------------OBJ:V-N-------------------------------+ +-------------------OBJ:V-N-------------------+ | +------------OBJ:V-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,set) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +----MOD_ATT:N-ADJ----+ +-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-ADJ (transcription,performing) COMP_of:N-N (hypothesis,SPXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | | +---------------MOD_ATT:N-N--------------+ | +---------MOD_ATT:N-ADJ---------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-ADJ (assays,performing) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ | | +---------------MOD_ATT:N-N--------------+ +-----------------COMP_by:N-N-----------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +---------MOD_ATT:N-ADJ---------+-------COMP_with:N-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | | | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-ADJ (assays,performing)
+--------------------------------OBJ:V-N-------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) OBJ:V-N (performing,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+--------------------------------OBJ:V-N-------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------OBJ:V-N-------+ +-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) OBJ:V-N (performing,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,transcription) OBJ:V-N (tested,hypothesis) COMP_of:N-N (set,SPXXX)
+--------------------------------OBJ:V-N-------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+-------OBJ:V-N-------+ +-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) OBJ:V-N (performing,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,transcription) OBJ:V-N (tested,hypothesis) COMP_of:N-N (set,SPXXX)
+-------------------------------------------------------------------OBJ:V-N-------------------------------------------------------------------+ | +-------------------OBJ:V-N-------------------+ | | +-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (performing,regions)
+------------------------------------------------OBJ:V-N------------------------------------------------+ | +-------------------OBJ:V-N-------------------+ | +------------OBJ:V-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (with,regions) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX)
+-------------------------------------------------------------------OBJ:V-N-------------------------------------------------------------------+ | +-------------------OBJ:V-N-------------------+ | +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (performing,regions)
+-------------------------------------------------------------------OBJ:V-N-------------------------------------------------------------------+ | +-------------------OBJ:V-N-------------------+ | +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------OBJ:V-N-------+ +-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) OBJ:V-N (performing,transcription) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX) OBJ:V-N (performing,regions)
+------------------------------------------------OBJ:V-N------------------------------------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+ | +-------------------OBJ:V-N-------------------+ | | +------------OBJ:V-N------------+ | | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+ | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (with,regions) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------------------------------OBJ:V-N------------------------------------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+ | +-------------------OBJ:V-N-------------------+ | +------------------------COMP_by:V-N------------------------+ | | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +---------MOD_ATT:N-ADJ---------+ | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-N (tested,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) COMP_in:ADJ-N (transcription,vitro) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (with,regions) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (assays,performing)
+------------------------------------------------OBJ:V-N------------------------------------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+ | | +------------------------COMP_by:V-N------------------------+ | | | +-------------------OBJ:V-N-------------------+ | | +---------MOD_ATT:N-ADJ---------+ | | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+ | | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_by:V-N (tested,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) OBJ:V-N (with,regions) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-ADJ (assays,performing) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) SUBJ:V-N (containing,set) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------COMP_with:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) COMP_of:N-N (set,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,assays) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+-------OBJ:V-N-------+ +-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) SUBJ:V-N (containing,set) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,transcription) OBJ:V-N (tested,hypothesis) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) MOD_ATT:N-N (regions,promoter) OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted)
+------------------------OBJ:V-N-----------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +---------------MOD_ATT:N-N--------------+ +------------------------------COMP_with:N-N-----------------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +----MOD_ATT:N-ADJ----+ +-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-ADJ (transcription,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+ | +---------------MOD_ATT:N-N--------------+ | +---------MOD_ATT:N-ADJ---------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_in:ADJ-N (assays,vitro) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ | +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) SUBJ:V-N (containing,set) MOD_ATT:N-N (regions,promoter) OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD:V-ADV (tested,directly) OBJ:V-N (tested,hypothesis) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ | +------------------------COMP_by:V-N------------------------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +---------MOD_ATT:N-ADJ---------+-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (containing,promoter) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | +---------------MOD_ATT:N-N--------------+ +-----------------COMP_by:N-N-----------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +---------MOD_ATT:N-ADJ---------+ | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (assays,performing)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +---------------MOD_ATT:N-N--------------+ | +-----------------COMP_by:N-N-----------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +---------MOD_ATT:N-ADJ---------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (assays,performing)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +-----------------COMP_by:N-N-----------------+ | | +------------------------OBJ:V-N-----------------------+ | | +---------MOD_ATT:N-ADJ---------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-ADJ (assays,performing) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+------------------------OBJ:V-N-----------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+------------------------OBJ:V-N-----------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +-------------------OBJ:V-N-------------------+ | | +-----------------COMP_by:N-N-----------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---------MOD_ATT:N-ADJ---------+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (assays,performing)
+------------------------OBJ:V-N-----------------------+ +-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +---------MOD_ATT:N-ADJ---------+-------COMP_with:N-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+-------OBJ:V-N-------+ +-------COMP_with:N-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) OBJ:V-N (performing,assays) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (performing,transcription) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (regions,promoter) OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_in:ADJ-N (assays,vitro) COMP_with:N-N (hypothesis,GENEXXX) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------OBJ:V-N-----------------------+ +-------------COMP_with:V-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------COMP_by:V-N------------------------+ +------------------------OBJ:V-N-----------------------+ | +---------MOD_ATT:N-ADJ---------+-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +---------MOD_ATT:N-ADJ---------+ | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (assays,performing)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------------COMP_with:N-N-----------------------------+ | +-----------------COMP_by:N-N-----------------+ | | +------------------------OBJ:V-N-----------------------+ | +---------MOD_ATT:N-ADJ---------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) COMP_with:N-N (hypothesis,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-ADJ (assays,performing) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +----------MOD_ATT:N-N----------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:V-N (tested,set) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:V-N (tested,GENEXXX) MOD_ATT:N-N (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:N-N------+----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---------MOD_ATT:N-ADJ---------+-------COMP_with:N-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+-------COMP_with:N-N------+----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (assays,set) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------COMP_with:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (GENEXXX,SPXXX) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ | +-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:N-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) OBJ:V-N (containing,promoter) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_in:ADJ-N (assays,vitro) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +-------OBJ:V-N-------+ | +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) OBJ:V-N (performing,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-----------------------SUBJ:V-N-----------------------+ +---------------MOD_ATT:N-N--------------+ +-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:N-N------+----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,assays) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ +----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX) COMP_of:N-N (GENEXXX,SPXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX)
+-------------COMP_with:N-N------------+ +------------------------OBJ:V-N-----------------------+ | +----------SUBJ:V-N---------+ +---------------MOD_ATT:N-N--------------+ +------------------------COMP_by:V-N------------------------+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +----------MOD_ATT:N-N----------+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------SUBJ:V-N-----------------------+ +------------------COMP_of:N-N-----------------+ +------------------------OBJ:V-N-----------------------+ +-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,assays) COMP_of:N-N (assays,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ | +-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:N-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +----------SUBJ:V-N---------+ +---------------MOD_ATT:N-N--------------+ +-------------------------------------COMP_with:V-N------------------------------------+----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) COMP_by:N-V (hypothesis,performing) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +----------MOD_ATT:N-N----------+ +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-N (tested,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:V-N (tested,GENEXXX) MOD_ATT:N-N (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +-------------COMP_with:V-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_with:V-N (assays,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) COMP_with:V-N (assays,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-----------------------SUBJ:V-N-----------------------+------------------------OBJ:V-N-----------------------+ +------------------COMP_of:N-N-----------------+ | +---------------MOD_ATT:N-N--------------+ +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------OBJ:V-N-------+ +-------COMP_with:N-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ | | | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,assays) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (assays,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (performing,transcription) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | +-------------------OBJ:V-N-------------------+ | +-----------------COMP_by:N-N-----------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +----MOD_ATT:N-ADJ----+ | +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-ADJ (transcription,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-----------------------SUBJ:V-N-----------------------+ +---------------MOD_ATT:N-N--------------+ +------------------------COMP_by:V-N------------------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +----------MOD_ATT:N-N----------+-------COMP_with:N-N------+----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,assays) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------OBJ:V-N-----------------------+ | +----------SUBJ:V-N---------+-------------------OBJ:V-N-------------------+ | +------------------------------COMP_with:N-N-----------------------------+----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------COMP_with:V-N------------+ +------------------------OBJ:V-N-----------------------+ | +----------SUBJ:V-N---------+-------------------OBJ:V-N-------------------+ | | +----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) OBJ:V-N (containing,promoter) COMP_with:V-N (assays,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) COMP_with:V-N (assays,GENEXXX) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ +-------------------OBJ:V-N-------------------+ | | +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX)
+-----------------------SUBJ:V-N-----------------------+------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+------------------COMP_of:N-N-----------------+ | +---------------MOD_ATT:N-N--------------+ | +---------MOD_ATT:N-ADJ---------+-------------COMP_with:N-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ | | | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,assays) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (assays,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro)
+-----------------------SUBJ:V-N-----------------------+------------------------OBJ:V-N-----------------------+ +------------------COMP_of:N-N-----------------+ +-------------------OBJ:V-N-------------------+ | +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,assays) COMP_of:N-N (assays,SPXXX) MOD:V-ADV (tested,directly) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (assays,vitro)
+------------------------------------------------OBJ:V-N------------------------------------------------+ | +-------------------OBJ:V-N-------------------+ | +------------OBJ:V-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+ | +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) OBJ:V-N (with,regions) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | | +---------------MOD_ATT:N-N--------------+ | +------------OBJ:V-N------------+ | | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +-------OBJ:V-N-------+ | | | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ | +SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_of:N-N (hypothesis,SPXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) OBJ:V-N (performing,transcription) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ | +------------------COMP_of:N-N-----------------+ | +---------------MOD_ATT:N-N--------------+ | +-------------COMP_with:N-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | | | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (assays,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,hypothesis)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------SUBJ:V-N----------------------------------------------+ +---------------MOD_ATT:N-N--------------+ +-----------------COMP_by:N-N-----------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +---------MOD_ATT:N-ADJ---------+-------COMP_with:N-N------+----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------COMP_by:N-N-----------------+ +------------------------OBJ:V-N-----------------------+ | +---------MOD_ATT:N-ADJ---------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ | +----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +----------SUBJ:V-N---------+ +---------------MOD_ATT:N-N--------------+ +-------------------------------------COMP_with:V-N------------------------------------+----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) COMP_by:N-V (hypothesis,performing) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+-----------------------SUBJ:V-N-----------------------+------------------------OBJ:V-N-----------------------+ +------------------COMP_of:N-N-----------------+ +-------------------OBJ:V-N-------------------+ | +-----------------COMP_by:N-N-----------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +----MOD_ATT:N-ADJ----+ +-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,assays) COMP_of:N-N (assays,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-ADJ (transcription,performing) MOD:V-ADV (tested,directly) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | +-------------------OBJ:V-N-------------------+ | | +---------MOD_ATT:N-ADJ---------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (containing,promoter) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------SUBJ:V-N----------------------------------------------+-------------------OBJ:V-N-------------------+ | | +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +----------SUBJ:V-N---------+-------------------OBJ:V-N-------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------------------------------OBJ:V-N------------------------------------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------OBJ:V-N-------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+ | +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) SUBJ:V-N (containing,SPXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (with,regions) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | +-------------------OBJ:V-N-------------------+ | | +------------OBJ:V-N------------+ | | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +-------OBJ:V-N-------+ | | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,transcription) COMP_with:N-N (hypothesis,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------------------------------OBJ:V-N------------------------------------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------OBJ:V-N-------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+ | +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) SUBJ:V-N (containing,SPXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (with,regions) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | +---------------MOD_ATT:N-N--------------+ | +-------------COMP_with:N-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | | | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX)
+------------------------------------------------OBJ:V-N------------------------------------------------+ | +----------SUBJ:V-N---------+-------------------OBJ:V-N-------------------+ | +------------OBJ:V-N------------+ | +----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+ | | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (assays,transcription) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) OBJ:V-N (containing,promoter) OBJ:V-N (with,regions) MOD:V-ADV (tested,directly) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +----------SUBJ:V-N---------+-------------------OBJ:V-N-------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) COMP_of:N-N (GENEXXX,SPXXX) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+------------------------------------------------OBJ:V-N------------------------------------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+----------SUBJ:V-N---------+-------------------OBJ:V-N-------------------+ | | +------------OBJ:V-N------------+ | +----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+ | | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) SUBJ:V-N (containing,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,set) OBJ:V-N (with,regions) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------------------------------OBJ:V-N------------------------------------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+ | | +------------------------COMP_by:V-N------------------------+ | | | +-------------------OBJ:V-N-------------------+ | | +---------MOD_ATT:N-ADJ---------+ | | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+ | +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-N (tested,assays) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) COMP_with:V-N (tested,set) SUBJ:V-N (containing,SPXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (with,regions) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-ADJ (assays,performing) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | +------------------------------------COMP_with:N-N-----------------------------------+ | +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription)
+-------------------------------------------------------------------OBJ:V-N-------------------------------------------------------------------+ | +-----------------------SUBJ:V-N-----------------------+ | | +------------------COMP_of:N-N-----------------+ +-------------------OBJ:V-N-------------------+ | | +-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,assays) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (assays,SPXXX) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription) OBJ:V-N (performing,regions)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | +-------------------OBJ:V-N-------------------+ | | +---------MOD_ATT:N-ADJ---------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-ADJ (assays,performing) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ +-------------------OBJ:V-N-------------------+ | | +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX)
+------------------------------------------------OBJ:V-N------------------------------------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+----------SUBJ:V-N---------+-------------------OBJ:V-N-------------------+ | +------------------------COMP_by:V-N------------------------+ | +----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +----MOD_ATT:N-ADJ----+ | | | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-N (tested,assays) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) SUBJ:V-N (containing,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,set) OBJ:V-N (with,regions) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-ADJ (transcription,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +-------------------OBJ:V-N-------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) COMP_with:N-N (hypothesis,set) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX)
+-------------COMP_with:N-N------------+ | +----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ | +----COMP_of:N-N----+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------COMP_of:N-N-----------------+ +------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) COMP_of:N-N (assays,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +----------MOD_ATT:N-N----------+-------COMP_with:N-N------+----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) MOD_ATT:N-N (regions,promoter) OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX) COMP_of:N-N (GENEXXX,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +---------MOD_ATT:N-ADJ---------+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (assays,performing)
+------------------COMP_of:N-N-----------------+ +------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+-------------COMP_with:N-N------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +----------MOD_ATT:N-N----------+-------COMP_with:N-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (assays,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX)
+-------------COMP_with:V-N------------+ | +----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ | +----COMP_of:N-N----+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_with:V-N (assays,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------------COMP_with:N-N-----------------------------+----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ +----COMP_of:N-N----+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------COMP_by:N-N-----------------+-----------------------SUBJ:V-N-----------------------+------------------------OBJ:V-N-----------------------+ | +---------MOD_ATT:N-ADJ---------+-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,assays) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------COMP_with:V-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_with:V-N (assays,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,hypothesis) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_of:N-N (hypothesis,SPXXX) OBJ:V-N (performing,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +----MOD_ATT:N-ADJ----+ +-------COMP_with:N-N------+----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-ADJ (transcription,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------COMP_by:N-N-----------------+ +------------------------OBJ:V-N-----------------------+ | +---------MOD_ATT:N-ADJ---------+-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,hypothesis) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:V-N (tested,set) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | +------------------------------------COMP_with:N-N-----------------------------------+ | | +------------------------------COMP_with:N-N-----------------------------+ | | +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +---------MOD_ATT:N-ADJ---------+ | | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_of:N-N (hypothesis,SPXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:N-N (hypothesis,set) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX)
+-----------------------SUBJ:V-N-----------------------+------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,assays) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-----------------------SUBJ:V-N-----------------------+ +---------------MOD_ATT:N-N--------------+ +-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,assays) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-----------------------SUBJ:V-N-----------------------+ +---------------MOD_ATT:N-N--------------+ +-----------------COMP_by:N-N-----------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +----MOD_ATT:N-ADJ----+ +-------COMP_with:N-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,assays) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-ADJ (transcription,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ | +-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------SUBJ:V-N----------------------------------------------+ +---------------MOD_ATT:N-N--------------+ | +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +-------OBJ:V-N-------+ +-------COMP_with:N-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (performing,transcription) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,hypothesis) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | +---------------MOD_ATT:N-N--------------+ | +---------MOD_ATT:N-ADJ---------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,hypothesis) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +----------MOD_ATT:N-N----------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) MOD_ATT:N-N (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (tested,set) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (regions,promoter) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:V-N (tested,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,hypothesis)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ | +-----------------COMP_by:N-N-----------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +---------MOD_ATT:N-ADJ---------+-------COMP_with:N-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-ADJ (assays,performing) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-----------------COMP_by:N-N-----------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---------MOD_ATT:N-ADJ---------+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-ADJ (assays,performing) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ +-------------------OBJ:V-N-------------------+ | | +---------MOD_ATT:N-ADJ---------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) OBJ:V-N (containing,promoter) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ | | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_in:ADJ-N (assays,vitro) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +-------------------OBJ:V-N-------------------+ | | | +---------------MOD_ATT:N-N--------------+ | +------MOD_POST:N-ADJ-----+ | | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ | | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_POST:N-ADJ (hypothesis,vitro) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) COMP_in:N-N (hypothesis,vitro)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ | | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +-------OBJ:V-N-------+ | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) OBJ:V-N (performing,transcription) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,assays) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ | +----------------------------------------------OBJ:V-N---------------------------------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (tested,set) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (tested,set) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +-----------------COMP_by:N-N-----------------+ | | +------------------------OBJ:V-N-----------------------+ | | +---------MOD_ATT:N-ADJ---------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-ADJ (assays,performing) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +---------------MOD_ATT:N-N--------------+ | | +------------OBJ:V-N------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +-------OBJ:V-N-------+ | | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) OBJ:V-N (performing,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ +-------------------OBJ:V-N-------------------+ | | +------------------------------COMP_with:N-N-----------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) OBJ:V-N (performing,assays) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ | +-----------------COMP_by:N-N-----------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---------MOD_ATT:N-ADJ---------+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (assays,performing)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +---------------MOD_ATT:N-N--------------+ | +-----------------COMP_by:N-N-----------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +----MOD_ATT:N-ADJ----+ | | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-ADJ (transcription,performing) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | +-------------------OBJ:V-N-------------------+ | | | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +-------OBJ:V-N-------+ | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) OBJ:V-N (performing,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | +-------------------OBJ:V-N-------------------+ | | | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-------------------OBJ:V-N-------------------+ | +-------------------OBJ:V-N-------------------+ | | +------MOD_POST:N-ADJ-----+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ +-------COMP_with:V-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (hypothesis,vitro) OBJ:V-N (tested,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (hypothesis,vitro) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ | +-----------------COMP_by:N-N-----------------+ | | +-------------------OBJ:V-N-------------------+ | | | +---------MOD_ATT:N-ADJ---------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-ADJ (assays,performing) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ | +-----------------COMP_by:N-N-----------------+ | | +-------------------OBJ:V-N-------------------+ | | | +---------MOD_ATT:N-ADJ---------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) MOD:V-ADV (tested,directly) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-ADJ (assays,performing) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+-------------------OBJ:V-N-------------------+ +------------------------OBJ:V-N-----------------------+ +------MOD_POST:N-ADJ-----+ +-------------COMP_with:V-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ +-------COMP_with:V-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (hypothesis,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:V-N (assays,GENEXXX) COMP_with:V-N (assays,set) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,hypothesis)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_in:ADJ-N (assays,vitro) COMP_with:N-N (hypothesis,GENEXXX) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) MOD_ATT:N-N (regions,promoter) OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) OBJ:V-N (tested,hypothesis) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ | | +------------OBJ:V-N------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +-------OBJ:V-N-------+ | | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) OBJ:V-N (performing,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) OBJ:V-N (performing,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +-----------------COMP_by:N-N-----------------+ | | +------------------------OBJ:V-N-----------------------+ | | +---------MOD_ATT:N-ADJ---------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) COMP_with:N-N (hypothesis,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-ADJ (assays,performing) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +-------------------OBJ:V-N-------------------+ | +------------------------OBJ:V-N-----------------------+ | +------MOD_POST:N-ADJ-----+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ +-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (hypothesis,vitro) OBJ:V-N (tested,set) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +----MOD_ATT:N-ADJ----+ +-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-ADJ (transcription,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---------MOD_ATT:N-ADJ---------+-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-ADJ (assays,performing) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +-----------------COMP_by:N-N-----------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +---------MOD_ATT:N-ADJ---------+-------COMP_with:N-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-ADJ (assays,performing) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-------------------------------------COMP_by:N-N------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +----MOD_ATT:N-ADJ----+ +-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-ADJ (transcription,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +-----------------COMP_by:N-N-----------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +----MOD_ATT:N-ADJ----+ +-------COMP_with:N-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-ADJ (transcription,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-------------------------------------COMP_by:N-N------------------------------------+ +-----------------COMP_by:N-N-----------------+ | +------------------------OBJ:V-N-----------------------+ | +---------MOD_ATT:N-ADJ---------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:N-N (hypothesis,set) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +-----------------COMP_by:N-N-----------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +----MOD_ATT:N-ADJ----+ +-------COMP_with:N-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-ADJ (transcription,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-------------------------------------COMP_by:N-N------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---------MOD_ATT:N-ADJ---------+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-ADJ (assays,performing) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +--------------------------------------------COMP_by:V-N-------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +------------------------COMP_by:V-N------------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +----------MOD_ATT:N-N----------+-------COMP_with:N-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (assays,transcription) COMP_by:V-N (tested,set) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ +-------------------OBJ:V-N-------------------+ | +-----------------COMP_by:N-N-----------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +----MOD_ATT:N-ADJ----+ +-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-ADJ (transcription,performing) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) COMP_by:N-N (hypothesis,set) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +--------------------------------------------COMP_by:V-N-------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +------------------------COMP_by:V-N------------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +----------MOD_ATT:N-N----------+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (assays,transcription) COMP_by:V-N (tested,set) COMP_of:N-N (set,SPXXX)
+-------------------------------------COMP_by:N-N------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | +-------------------OBJ:V-N-------------------+ | | +---------MOD_ATT:N-ADJ---------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) COMP_by:N-N (hypothesis,set) OBJ:V-N (containing,promoter) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +--------------------------------OBJ:V-N-------------------------------+ | | +---------------MOD_ATT:N-N--------------+ | +------------OBJ:V-N------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_in:ADJ-N (assays,vitro) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +----MOD_ATT:N-ADJ----+ +-------COMP_with:N-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-ADJ (transcription,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +--------------------------------OBJ:V-N-------------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) OBJ:V-N (performing,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +--------------------------------OBJ:V-N-------------------------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) OBJ:V-N (performing,set) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ | +--------------------------------OBJ:V-N-------------------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,set) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +--------------------------------OBJ:V-N-------------------------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) COMP_in:ADJ-N (transcription,vitro) OBJ:V-N (performing,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | | +--------------------------------OBJ:V-N-------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_in:ADJ-N (assays,vitro) OBJ:V-N (performing,assays) OBJ:V-N (performing,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | +-------------------------------------COMP_by:N-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +----MOD_ATT:N-ADJ----+ +-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-ADJ (transcription,performing) COMP_of:N-N (hypothesis,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ | +-------------------OBJ:V-N-------------------+ | +-----------------COMP_by:N-N-----------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +----MOD_ATT:N-ADJ----+ +-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) COMP_by:N-N (hypothesis,set) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-ADJ (transcription,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (hypothesis,SPXXX)
+-------------------------------------------------------------------OBJ:V-N-------------------------------------------------------------------+ +--------------------------------OBJ:V-N-------------------------------+ +-------------------OBJ:V-N-------------------+ | +------------OBJ:V-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------OBJ:V-N-------+ +-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) COMP_in:ADJ-N (transcription,vitro) OBJ:V-N (performing,set) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (performing,transcription) OBJ:V-N (tested,hypothesis) OBJ:V-N (performing,regions) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------------------------------OBJ:V-N------------------------------------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------OBJ:V-N-------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+ | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) COMP_in:ADJ-N (transcription,vitro) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (with,regions) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------------------------------OBJ:V-N------------------------------------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------OBJ:V-N-------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+ | | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) COMP_in:ADJ-N (transcription,vitro) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) OBJ:V-N (with,regions) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------------------------------OBJ:V-N------------------------------------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+ | +-------------------OBJ:V-N-------------------+ | | +------------OBJ:V-N------------+ | | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+ +---COMP_in:ADJ-N---+ | | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) OBJ:V-N (with,regions) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------OBJ:V-N-------+ +-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,transcription) OBJ:V-N (tested,hypothesis) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +-----------------COMP_by:N-N-----------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +---------MOD_ATT:N-ADJ---------+-------COMP_with:N-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | +---------------MOD_ATT:N-N--------------+ | +---------MOD_ATT:N-ADJ---------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-ADJ (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ | +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | +---------------MOD_ATT:N-N--------------+ +-----------------COMP_by:N-N-----------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +---------MOD_ATT:N-ADJ---------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (assays,performing)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +----MOD_ATT:N-ADJ----+ | | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-ADJ (transcription,performing) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ +-------------------OBJ:V-N-------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) OBJ:V-N (performing,assays) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) OBJ:V-N (performing,assays) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ +-------------------OBJ:V-N-------------------+ | +------MOD_POST:N-ADJ-----+ +-------------COMP_with:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ +-------COMP_with:V-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (hypothesis,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) OBJ:V-N (containing,promoter) COMP_with:V-N (assays,set) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+------------------------OBJ:V-N-----------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------OBJ:V-N-------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +---------------MOD_ATT:N-N--------------+ +------------------------COMP_by:V-N------------------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +----------MOD_ATT:N-N----------+ | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:V-N (tested,GENEXXX) MOD_ATT:N-N (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +-------------------OBJ:V-N-------------------+ | +------------------------COMP_by:V-N------------------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +----------MOD_ATT:N-N----------+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_by:V-N (tested,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (containing,promoter) MOD_ATT:N-N (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------OBJ:V-N-------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------OBJ:V-N-------+ +-------COMP_with:N-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (performing,transcription) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) OBJ:V-N (performing,assays) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+-------COMP_with:N-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (assays,set) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +-----------------COMP_by:N-N-----------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +----------MOD_ATT:N-N----------+-------COMP_with:N-N------+----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------COMP_of:N-N-----------------+ +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +----------MOD_ATT:N-N----------+-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (assays,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing)
+------------------------OBJ:V-N-----------------------+ +-----------------------SUBJ:V-N-----------------------+ +---------------MOD_ATT:N-N--------------+ +-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:N-N------+----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (assays,GENEXXX) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,assays) COMP_with:N-N (assays,set) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+ +----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-----------------------SUBJ:V-N-----------------------+ +---------------MOD_ATT:N-N--------------+ +-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+-------COMP_with:N-N------+----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,assays) COMP_with:N-N (assays,set) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +-----------------COMP_by:N-N-----------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +----------MOD_ATT:N-N----------+ +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:V-N (tested,GENEXXX) MOD_ATT:N-N (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +-----------------COMP_by:N-N-----------------+-------------COMP_with:N-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +----------MOD_ATT:N-N----------+-------COMP_with:N-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-------------COMP_with:V-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX) OBJ:V-N (assays,hypothesis)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ +SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (regions,promoter) OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-------------COMP_with:V-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_with:V-N (assays,set) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (hypothesis,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+ +----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-----MOD_ATT:N-N-----+ | | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (transcription,performing) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------------------------------OBJ:V-N------------------------------------------------+ | +-------------------OBJ:V-N-------------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+ | +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+MOD_ATT:N+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) OBJ:V-N (with,regions) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) COMP_of:N-N (set,SPXXX)
+------------------------------------------------OBJ:V-N------------------------------------------------+ | +-------------------OBJ:V-N-------------------+ | +-------------COMP_with:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+-SUBJ:V-N+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) SUBJ:V-N (containing,SPXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (GENEXXX,SPXXX) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (with,regions) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ | +-----------------------------------------COMP_of:N-N----------------------------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ +SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_ATT:N-N (promoter,GENEXXX)
+-----------------------SUBJ:V-N-----------------------+------------------------OBJ:V-N-----------------------+ +------------------COMP_of:N-N-----------------+ +-------------------OBJ:V-N-------------------+ | +-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,assays) COMP_with:N-N (assays,set) COMP_of:N-N (assays,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+----------SUBJ:V-N---------+-------------------OBJ:V-N-------------------+ | | +-----------------COMP_by:N-N-----------------+ +----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +----------MOD_ATT:N-N----------+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) COMP_with:V-N (tested,set) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) MOD_ATT:N-N (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------------------------------OBJ:V-N------------------------------------------------+ +-------------------OBJ:V-N-------------------+ | +-------------------OBJ:V-N-------------------+ | +------MOD_POST:N-ADJ-----+ +-------------COMP_with:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ +-------COMP_with:V-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +-SUBJ:V-N+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (hypothesis,vitro) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_with:V-N (assays,set) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (with,regions) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) SUBJ:V-N (containing,SPXXX) OBJ:V-N (assays,hypothesis)
+------------------------------------------------OBJ:V-N------------------------------------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+ | +-------------------OBJ:V-N-------------------+ | | +------------OBJ:V-N------------+ | | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+ | +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) SUBJ:V-N (containing,SPXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (with,regions) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ | | +---------------MOD_ATT:N-N--------------+ +------MOD_POST:N-ADJ-----+ +-------------COMP_with:V-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ +-------COMP_with:V-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (hypothesis,vitro) COMP_of:N-N (hypothesis,SPXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_with:V-N (assays,set) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------SUBJ:V-N----------------------------------------------+-------------------OBJ:V-N-------------------+ | +-----------------------------------------COMP_of:N-N----------------------------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ | | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------------------------------OBJ:V-N------------------------------------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+ | | | +-------------------OBJ:V-N-------------------+ | +----------SUBJ:V-N---------+-------------------OBJ:V-N-------------------+ | | +------MOD_POST:N-ADJ-----+ | | +----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ | | | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +-SUBJ:V-N+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) SUBJ:V-N (containing,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (with,regions) MOD_POST:N-ADJ (hypothesis,vitro) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:N-N (hypothesis,vitro)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (regions,promoter) OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX) COMP_of:N-N (GENEXXX,SPXXX)
+----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ +----COMP_of:N-N----+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX) COMP_of:N-N (GENEXXX,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ | +----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+----COMP_of:N-N----+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (regions,promoter) OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ | +-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:N-N------+----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (assays,GENEXXX) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) COMP_with:N-N (assays,set) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ | +-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (assays,GENEXXX) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (assays,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ | +-------------COMP_with:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ | +-------------COMP_with:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,hypothesis) COMP_with:V-N (assays,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | +---------------MOD_ATT:N-N--------------+ +-----------------COMP_by:N-N-----------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +----------MOD_ATT:N-N----------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:N-N (hypothesis,set) MOD_ATT:N-N (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ | +-----------------COMP_by:N-N-----------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +----------MOD_ATT:N-N----------+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ | +-----------------COMP_by:N-N-----------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +----------MOD_ATT:N-N----------+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +---------------MOD_ATT:N-N--------------+ | +-----------------COMP_by:N-N-----------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +----------MOD_ATT:N-N----------+ | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | +---------------MOD_ATT:N-N--------------+ | +--------------------------------OBJ:V-N-------------------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +----------MOD_ATT:N-N----------+-------COMP_with:N-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +-----------------COMP_by:N-N-----------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +----------MOD_ATT:N-N----------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:V-N (tested,GENEXXX) MOD_ATT:N-N (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-----------------COMP_by:N-N-----------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +----------MOD_ATT:N-N----------+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------OBJ:V-N-----------------------+ +--------------------------------------------COMP_by:V-N-------------------------------------------+ +-------------------OBJ:V-N-------------------+ | +------------------------COMP_by:V-N------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +----------MOD_ATT:N-N----------+-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_by:V-N (tested,set) COMP_of:N-N (set,SPXXX)
+-------------------------------------COMP_by:N-N------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +----------MOD_ATT:N-N----------+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------OBJ:V-N-----------------------+ +--------------------------------OBJ:V-N-------------------------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,set) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +--------------------------------OBJ:V-N-------------------------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,set) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-----------------------------------------COMP_of:N-N----------------------------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+------------------------------------------------OBJ:V-N------------------------------------------------+ | +-------------------OBJ:V-N-------------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +MOD_ATT:N+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) OBJ:V-N (with,regions) SUBJ:V-N (tested,We) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------------------------------OBJ:V-N------------------------------------------------+ +-------------------OBJ:V-N-------------------+ | +-------------------OBJ:V-N-------------------+ | +------MOD_POST:N-ADJ-----+ +-------------COMP_with:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ +-------COMP_with:V-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +-SUBJ:V-N+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (hypothesis,vitro) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) COMP_with:V-N (assays,GENEXXX) SUBJ:V-N (containing,SPXXX) COMP_with:V-N (assays,set) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (with,regions) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+------------------------------------------------OBJ:V-N------------------------------------------------+ | +-------------------OBJ:V-N-------------------+ | +-------------COMP_with:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (with,regions) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) COMP_with:V-N (assays,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------------------------------OBJ:V-N------------------------------------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+ | +-------------------OBJ:V-N-------------------+ | | +------------OBJ:V-N------------+ | | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+ | | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +MOD_ATT:N+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) OBJ:V-N (with,regions) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +-----------------------------------------COMP_of:N-N----------------------------------------+ | +-------------------OBJ:V-N-------------------+ | | +------------------------OBJ:V-N-----------------------+ | +------MOD_POST:N-ADJ-----+ | | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ +-------COMP_with:V-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (hypothesis,vitro) OBJ:V-N (tested,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) SUBJ:V-N (containing,SPXXX) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_of:N-N (hypothesis,SPXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | | +-----------------------------------------COMP_of:N-N----------------------------------------+ | | +-------------------OBJ:V-N-------------------+ | | +------------------------OBJ:V-N-----------------------+ | +------MOD_POST:N-ADJ-----+ | | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ +-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (hypothesis,vitro) OBJ:V-N (tested,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (hypothesis,vitro) SUBJ:V-N (containing,hypothesis) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,set) COMP_of:N-N (hypothesis,SPXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (assays,set) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (assays,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) MOD_ATT:N-N (regions,promoter) OBJ:V-N (containing,regions) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +------------------------COMP_by:V-N------------------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +----------MOD_ATT:N-N----------+-------COMP_with:N-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,performing) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ | +------------------------COMP_by:V-N------------------------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +----------MOD_ATT:N-N----------+-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------OBJ:V-N-------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +---------------MOD_ATT:N-N--------------+ | +-----------------COMP_by:N-N-----------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +----------MOD_ATT:N-N----------+ | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:V-N (tested,GENEXXX) MOD_ATT:N-N (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +---------------MOD_ATT:N-N--------------+ +------------------------COMP_by:V-N------------------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-----MOD_ATT:N-N-----+ | | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (transcription,performing) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (assays,GENEXXX) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (assays,set) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +----------MOD_ATT:N-N----------+-------COMP_with:N-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------COMP_with:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-N--------+------------OBJ:V-N------------+-------COMP_with:V-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) SUBJ:V-N (assays,transcription) COMP_of:N-N (GENEXXX,SPXXX) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) COMP_by:V-N (tested,performing) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------COMP_with:N-N------------+ | +----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ | +----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (assays,GENEXXX) SUBJ:V-N (containing,GENEXXX) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (assays,set) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------COMP_of:N-N-----------------+ +------------------------OBJ:V-N-----------------------+ +-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (assays,GENEXXX) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (assays,set) COMP_of:N-N (assays,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription)
+-------------COMP_with:V-N------------+ | +----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ | +----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-N--------+------------OBJ:V-N------------+-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) SUBJ:V-N (assays,transcription) COMP_of:N-N (GENEXXX,SPXXX) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) COMP_by:V-N (tested,performing) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------COMP_of:N-N-----------------+ +------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-----MOD_ATT:N-N-----+ +-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (assays,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (transcription,performing) OBJ:V-N (tested,hypothesis)
+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ | +-----------------COMP_by:N-N-----------------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +----------MOD_ATT:N-N----------+-------COMP_with:N-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) OBJ:V-N (containing,promoter) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------COMP_with:N-N------------+ +------------------------COMP_by:V-N------------------------+ +----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ | +----------MOD_ATT:N-N----------+ +----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-N--------+MOD_POST:N-+ | +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ +COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_with:V-N (tested,set) SUBJ:V-N (containing,SPXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:N-N (performing,vitro) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+----------SUBJ:V-N---------+ +---------------MOD_ATT:N-N--------------+ +-----------------COMP_by:N-N-----------------+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +----------MOD_ATT:N-N----------+ | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:N-N (hypothesis,set) MOD_ATT:N-N (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------COMP_by:V-N------------------------+-----------------------SUBJ:V-N-----------------------+------------------------OBJ:V-N-----------------------+ | +----------MOD_ATT:N-N----------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,assays) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ | +----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+------------------------OBJ:V-N-----------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | +---------------MOD_ATT:N-N--------------+ | +-------------COMP_with:V-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX) OBJ:V-N (assays,hypothesis)
+------------------------OBJ:V-N-----------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | +---------------MOD_ATT:N-N--------------+ | +-------------COMP_with:V-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_with:V-N (assays,set) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) COMP_of:N-N (hypothesis,SPXXX)
+-----------------------SUBJ:V-N-----------------------+------------------------OBJ:V-N-----------------------+ +------------------COMP_of:N-N-----------------+ | +---------------MOD_ATT:N-N--------------+ +------------------------COMP_by:V-N------------------------+-------------COMP_with:N-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-----MOD_ATT:N-N-----+ +-------COMP_with:N-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | | | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,assays) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (assays,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (transcription,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +-------------------OBJ:V-N-------------------+ | +------------------------COMP_by:V-N------------------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-----MOD_ATT:N-N-----+ | +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (transcription,performing) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +---------------MOD_ATT:N-N--------------+ +------------------------COMP_by:V-N------------------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-----MOD_ATT:N-N-----+ | +----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (transcription,performing) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | | +---------------MOD_ATT:N-N--------------+ +------------------------------COMP_with:N-N-----------------------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) COMP_of:N-N (hypothesis,SPXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +----------MOD_ATT:N-N----------+ +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:N-N (hypothesis,set) MOD_ATT:N-N (assays,performing) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------SUBJ:V-N----------------------------------------------+-------------------OBJ:V-N-------------------+ | +-----------------COMP_by:N-N-----------------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +----------MOD_ATT:N-N----------+-------COMP_with:N-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) OBJ:V-N (containing,promoter) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ | +-------------------OBJ:V-N-------------------+ | +------MOD_POST:N-ADJ-----+ +-------------COMP_with:V-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ +-------COMP_with:V-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (hypothesis,vitro) COMP_of:N-N (hypothesis,SPXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) OBJ:V-N (containing,promoter) COMP_with:V-N (assays,set) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +---------------MOD_ATT:N-N--------------+ +------------------------------COMP_with:N-N-----------------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ +----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------------------------------OBJ:V-N------------------------------------------------+ +-------------COMP_with:V-N------------+ | +-------------------OBJ:V-N-------------------+ | +----------SUBJ:V-N---------+-------------------OBJ:V-N-------------------+ | +------MOD_POST:N-ADJ-----+ | | +----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ +-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +-SUBJ:V-N+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (hypothesis,vitro) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) SUBJ:V-N (containing,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_with:V-N (assays,set) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (with,regions) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) OBJ:V-N (assays,hypothesis)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ +-------------------OBJ:V-N-------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) OBJ:V-N (performing,assays) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) COMP_with:N-N (hypothesis,set) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------------------------------OBJ:V-N------------------------------------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ | | | +----------SUBJ:V-N---------+-------------------OBJ:V-N-------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+-SUBJ:V-N+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) COMP_in:ADJ-N (transcription,vitro) SUBJ:V-N (containing,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,set) OBJ:V-N (with,regions) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | +------------------------------------COMP_with:N-N-----------------------------------+ | +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | | +---------------MOD_ATT:N-N--------------+ +------------------------------COMP_with:N-N-----------------------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) COMP_of:N-N (hypothesis,SPXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription)
+------------------------OBJ:V-N-----------------------+ +-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:N-N------+----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (assays,GENEXXX) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) COMP_with:N-N (assays,set) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+-----------------------SUBJ:V-N-----------------------+------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +----------MOD_ATT:N-N----------+-------COMP_with:N-N------+----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,assays) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------SUBJ:V-N-----------------------+ +------------------COMP_of:N-N-----------------+ +------------------------OBJ:V-N-----------------------+ +-------------COMP_with:N-N------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (assays,GENEXXX) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,assays) COMP_with:N-N (assays,set) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (assays,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +-----------------COMP_by:N-N-----------------+ | | +------------------------OBJ:V-N-----------------------+ | | +----------MOD_ATT:N-N----------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_with:V-N (tested,set) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ | +----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+----COMP_of:N-N----+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ | +----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+----COMP_of:N-N----+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ | +--------------------------------OBJ:V-N-------------------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,hypothesis) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-----MOD_ATT:N-N-----+ | +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:V-N (tested,set) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (transcription,performing) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------SUBJ:V-N----------------------------------------------+-------------------OBJ:V-N-------------------+ | | +--------------------------------OBJ:V-N-------------------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+-------------COMP_with:N-N------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +----------MOD_ATT:N-N----------+-------COMP_with:N-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | +------------------------------------COMP_with:N-N-----------------------------------+ | +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_of:N-N (hypothesis,SPXXX) OBJ:V-N (performing,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | +-------------------OBJ:V-N-------------------+ | +------------------------OBJ:V-N-----------------------+ +------MOD_POST:N-ADJ-----+ +-------------COMP_with:V-N------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ +-------COMP_with:V-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (hypothesis,vitro) COMP_of:N-N (hypothesis,SPXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_with:V-N (assays,set) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX)
+------------------------OBJ:V-N-----------------------+ +-----------------------SUBJ:V-N-----------------------+-------------------OBJ:V-N-------------------+ | +-----------------COMP_by:N-N-----------------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +----------MOD_ATT:N-N----------+-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,assays) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ | +---------------MOD_ATT:N-N--------------+ +------MOD_POST:N-ADJ-----+ +-------------COMP_with:V-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ +-------COMP_with:V-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (hypothesis,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_with:V-N (assays,set) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ | +----------------------------------------------OBJ:V-N---------------------------------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ +-------------------OBJ:V-N-------------------+ | | +-----------------COMP_by:N-N-----------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +----------MOD_ATT:N-N----------+-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +---------------MOD_ATT:N-N--------------+ | +-----------------COMP_by:N-N-----------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +----------MOD_ATT:N-N----------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ | +-------------------OBJ:V-N-------------------+ | | | +---------------MOD_ATT:N-N--------------+ | +------MOD_POST:N-ADJ-----+ | | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ | | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (hypothesis,vitro) OBJ:V-N (tested,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------SUBJ:V-N-----------------------+------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-----MOD_ATT:N-N-----+ +-------COMP_with:N-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) SUBJ:V-N (containing,assays) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (transcription,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) COMP_with:N-N (assays,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +----------MOD_ATT:N-N----------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:N-N (hypothesis,set) MOD_ATT:N-N (assays,performing) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +-------------------OBJ:V-N-------------------+ | | +------------------------OBJ:V-N-----------------------+ +------MOD_POST:N-ADJ-----+ | | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ | | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (hypothesis,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,set) COMP_with:N-N (hypothesis,GENEXXX) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (tested,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ | +-----------------COMP_by:N-N-----------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +----------MOD_ATT:N-N----------+ | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+-------------------------------------COMP_by:N-N------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +----------MOD_ATT:N-N----------+-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +--------------------------------------------COMP_by:V-N-------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +------------------------COMP_by:V-N------------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-----MOD_ATT:N-N-----+ +-------COMP_with:N-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (transcription,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_by:V-N (tested,set) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +--------------------------------------------COMP_by:V-N-------------------------------------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-N--------+------------OBJ:V-N------------+-------COMP_with:V-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:V-N (tested,set) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,performing)
+-------------------------------------COMP_by:N-N------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +----------MOD_ATT:N-N----------+-------COMP_with:N-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+--------------------------------------------COMP_by:V-N-------------------------------------------+ +------------------------COMP_by:V-N------------------------+ | +------------------------OBJ:V-N-----------------------+ | +----------MOD_ATT:N-N----------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_by:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+--------------------------------------------COMP_by:V-N-------------------------------------------+ +------------------------COMP_by:V-N------------------------+ | +------------------------OBJ:V-N-----------------------+ | +----------MOD_ATT:N-N----------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_by:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------OBJ:V-N-----------------------+ +--------------------------------------------COMP_by:V-N-------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-N--------+------------OBJ:V-N------------+-------COMP_with:V-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:V-N (assays,GENEXXX) COMP_in:ADJ-N (transcription,vitro) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,performing) MOD_ATT:N-N (promoter,GENEXXX)
+--------------------------------------------COMP_by:V-N-------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-N--------+MOD_POST:N-+ +-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ +COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ | +--------------------------------OBJ:V-N-------------------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (performing,set) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-----------------------------------------COMP_of:N-N----------------------------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (tested,set) OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (hypothesis,SPXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ +-------------------OBJ:V-N-------------------+ | | +-----------------------------------------COMP_of:N-N----------------------------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-------------------OBJ:V-N-------------------+ | | +-------------------OBJ:V-N-------------------+ | | +------MOD_POST:N-ADJ-----+ | | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ +-------COMP_with:V-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (hypothesis,vitro) OBJ:V-N (tested,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) COMP_with:V-N (assays,GENEXXX) SUBJ:V-N (containing,SPXXX) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (hypothesis,SPXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ +-------------------OBJ:V-N-------------------+ | | +-----------------------------------------COMP_of:N-N----------------------------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (tested,set) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) COMP_with:V-N (assays,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (hypothesis,SPXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ +-------------------OBJ:V-N-------------------+ | | +-----------------------------------------COMP_of:N-N----------------------------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+------------------------------------------------OBJ:V-N------------------------------------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------OBJ:V-N-------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-V--------+------------OBJ:V-N------------+ | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +MOD_ATT:N+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:V-V (tested,performing) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (performing,assays) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (with,regions) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-----------------------------------------COMP_of:N-N----------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (tested,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------------------------------OBJ:V-N------------------------------------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------OBJ:V-N-------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (with,regions) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+------------------------------------------------OBJ:V-N------------------------------------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+ | | | +-------------------OBJ:V-N-------------------+ | | | +-------------------OBJ:V-N-------------------+ | | +------MOD_POST:N-ADJ-----+ | | | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ | | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +-SUBJ:V-N+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) COMP_with:V-N (tested,set) SUBJ:V-N (containing,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (with,regions) MOD_POST:N-ADJ (hypothesis,vitro) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX) COMP_in:N-N (hypothesis,vitro)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-----------------------------------------COMP_of:N-N----------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (tested,set) OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-----------------------------------------COMP_of:N-N----------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (assays,GENEXXX) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (performing,assays) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (assays,set) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+-------------COMP_with:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-N--------+MOD_POST:N-+ +-------COMP_with:V-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ +COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) COMP_with:V-N (assays,set) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,performing)
+------------------------OBJ:V-N-----------------------+ +-------------COMP_with:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-N--------+------------OBJ:V-N------------+-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) SUBJ:V-N (assays,transcription) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) COMP_by:V-N (tested,performing) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +-------------COMP_with:V-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-N--------+------------OBJ:V-N------------+-------COMP_with:V-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) OBJ:V-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) COMP_by:V-N (tested,performing) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------------COMP_with:N-N-----------------------------+ | +-------------------OBJ:V-N-------------------+ | | +------------------------OBJ:V-N-----------------------+ +------MOD_POST:N-ADJ-----+ | | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (hypothesis,vitro) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,set) COMP_with:N-N (hypothesis,GENEXXX) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | +-------------------OBJ:V-N-------------------+ | +-----------------COMP_by:N-N-----------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +----------MOD_ATT:N-N----------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (containing,promoter) MOD_ATT:N-N (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-----MOD_ATT:N-N-----+ +-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (transcription,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------COMP_by:V-N------------------------+ +------------------------OBJ:V-N-----------------------+ | +----------MOD_ATT:N-N----------+-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+-------------COMP_with:N-N------------+ | +----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ +----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +-----MOD_ATT:N-N-----+ +-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (transcription,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------COMP_with:V-N------------+ +------------------------OBJ:V-N-----------------------+ | +----------SUBJ:V-N---------+ +---------------MOD_ATT:N-N--------------+ +------------OBJ:V-N------------+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +MOD_POST:N-+ +-------COMP_with:V-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) SUBJ:V-N (containing,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_with:V-N (assays,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,set) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,performing)
+------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+ | +---------------MOD_ATT:N-N--------------+ | +----------MOD_ATT:N-N----------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------COMP_with:N-N------------+ +-----------------COMP_by:N-N-----------------+ +----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ | +----------MOD_ATT:N-N----------+ +----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +-----MOD_ATT:N-N-----+ | +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (transcription,performing) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------COMP_with:V-N------------+ | +----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+ +----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-N--------+MOD_POST:N-+ +-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ +COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) SUBJ:V-N (containing,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_with:V-N (assays,set) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,performing)
+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ | +---------------MOD_ATT:N-N--------------+ +------MOD_POST:N-ADJ-----+ +-------------COMP_with:V-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ +-------COMP_with:V-N------+----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (hypothesis,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) SUBJ:V-N (containing,SPXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_with:V-N (assays,set) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+------------------COMP_of:N-N-----------------+ | +---------------MOD_ATT:N-N--------------+ | +----------MOD_ATT:N-N----------+-------------COMP_with:N-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (assays,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,performing) COMP_in:ADJ-N (assays,vitro)
+------------------------OBJ:V-N-----------------------+ +------------------COMP_of:N-N-----------------+ | +---------------MOD_ATT:N-N--------------+ +------------------------COMP_by:V-N------------------------+-------------COMP_with:N-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-----MOD_ATT:N-N-----+ +-------COMP_with:N-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (assays,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (transcription,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-------------COMP_with:V-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:V-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) SUBJ:V-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX) OBJ:V-N (assays,performing)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +---------------MOD_ATT:N-N--------------+ | +-----------------COMP_by:N-N-----------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +-----MOD_ATT:N-N-----+ | +----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (transcription,performing) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +---------------MOD_ATT:N-N--------------+ | +------------OBJ:V-N------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +MOD_POST:N-+ | +----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (assays,performing) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,SPXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_in:N-N (performing,vitro) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +---------------MOD_ATT:N-N--------------+ +------------------------------COMP_with:N-N-----------------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ +----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------SUBJ:V-N----------------------------------------------+ +---------------MOD_ATT:N-N--------------+ | +-------------COMP_with:V-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:V-N------+----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) OBJ:V-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (GENEXXX,SPXXX) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------SUBJ:V-N-----------------------+ +------------------COMP_of:N-N-----------------+ +------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-----MOD_ATT:N-N-----+ +-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,assays) COMP_of:N-N (assays,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (transcription,performing) OBJ:V-N (tested,hypothesis)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------COMP_by:N-N-----------------+ +------------------------OBJ:V-N-----------------------+ | +----------MOD_ATT:N-N----------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ | +-------------------OBJ:V-N-------------------+ +----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +MOD_POST:N-+ | | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) SUBJ:V-N (containing,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,set) COMP_in:N-N (performing,vitro) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ +----------SUBJ:V-N---------+ +---------------MOD_ATT:N-N--------------+ +------MOD_POST:N-ADJ-----+ | +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ | | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (hypothesis,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,set) COMP_with:N-N (hypothesis,GENEXXX) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-N--------+------------OBJ:V-N------------+ +----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (assays,performing) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------OBJ:V-N-----------------------+ | +----------SUBJ:V-N---------+-------------------OBJ:V-N-------------------+ | +------------------------------COMP_with:N-N-----------------------------+----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) OBJ:V-N (containing,promoter) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | | +---------------MOD_ATT:N-N--------------+ +------------------------------COMP_with:N-N-----------------------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) COMP_of:N-N (hypothesis,SPXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription)
+------------------------------------------------OBJ:V-N------------------------------------------------+ | +----------SUBJ:V-N---------+-------------------OBJ:V-N-------------------+ | | +----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+ | | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +MOD_ATT:N+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) OBJ:V-N (with,regions) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) COMP_by:N-V (hypothesis,performing) OBJ:V-N (performing,assays) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+------------------COMP_of:N-N-----------------+ | +---------------MOD_ATT:N-N--------------+ | +----------MOD_ATT:N-N----------+-------------COMP_with:N-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ | | | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (assays,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,performing) COMP_in:ADJ-N (assays,vitro)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +-------------------OBJ:V-N-------------------+ | | | +------------------------OBJ:V-N-----------------------+ +------MOD_POST:N-ADJ-----+ | | | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ | | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (hypothesis,vitro) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,set) COMP_with:N-N (hypothesis,GENEXXX) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (hypothesis,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | +---------------MOD_ATT:N-N--------------+ | +-------------COMP_with:V-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:V-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,hypothesis) COMP_by:N-N (hypothesis,performing) SUBJ:V-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX) OBJ:V-N (assays,performing)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ +-------------------OBJ:V-N-------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) COMP_with:N-N (hypothesis,set) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +-------------------OBJ:V-N-------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) COMP_with:N-N (hypothesis,set) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+-------------COMP_with:V-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +MOD_POST:N-+ +-------COMP_with:V-N------+----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) SUBJ:V-N (containing,SPXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_with:V-N (assays,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,performing)
+-------------------OBJ:V-N-------------------+ +------------------------OBJ:V-N-----------------------+ +------MOD_POST:N-ADJ-----+ +-------------COMP_with:V-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ +-------COMP_with:V-N------+----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (hypothesis,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) SUBJ:V-N (containing,SPXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_with:V-N (assays,set) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-N--------+------------OBJ:V-N------------+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (tested,set) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (assays,performing) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------COMP_with:V-N------------+ +-------------------OBJ:V-N-------------------+ +----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ +------MOD_POST:N-ADJ-----+ | +----COMP_of:N-N----+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ +-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (hypothesis,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) SUBJ:V-N (containing,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_with:V-N (assays,set) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,set) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------------COMP_with:N-N-----------------------------+----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ +----COMP_of:N-N----+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +-----MOD_ATT:N-N-----+ | | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (transcription,performing) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ | +----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+----COMP_of:N-N----+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-N--------+------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (assays,performing) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-------------COMP_with:V-N------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:V-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:V-N (assays,GENEXXX) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (assays,performing) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +------------OBJ:V-N------------+-------------COMP_with:V-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-N--------+MOD_POST:N-+ +-------COMP_with:V-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ +COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,set) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,performing)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------SUBJ:V-N----------------------------------------------+ +---------------MOD_ATT:N-N--------------+ | +------------OBJ:V-N------------+-------------COMP_with:V-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ +-------COMP_with:V-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) COMP_with:V-N (assays,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,performing)
+------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+-----------------------SUBJ:V-N-----------------------+-------------------OBJ:V-N-------------------+ | | +----------MOD_ATT:N-N----------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,assays) MOD:V-ADV (tested,directly) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,performing)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +MOD_POST:N-+ +-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) MOD_POST:N-ADJ (performing,vitro) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (assays,performing) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +-----------------COMP_by:N-N-----------------+ | +------------------------OBJ:V-N-----------------------+ | | +----------MOD_ATT:N-N----------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +-------------------OBJ:V-N-------------------+ | +------------------------OBJ:V-N-----------------------+ | +------MOD_POST:N-ADJ-----+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ +-------COMP_with:V-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (hypothesis,vitro) OBJ:V-N (tested,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +-------------------OBJ:V-N-------------------+ | | +------------------------OBJ:V-N-----------------------+ +------MOD_POST:N-ADJ-----+ | | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (hypothesis,vitro) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,set) COMP_with:N-N (hypothesis,GENEXXX) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-------------------OBJ:V-N-------------------+ | | +---------------MOD_ATT:N-N--------------+ | +------MOD_POST:N-ADJ-----+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ +-------COMP_with:V-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (hypothesis,vitro) OBJ:V-N (tested,set) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ +-------------------OBJ:V-N-------------------+ | | +------------------------------COMP_with:N-N-----------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (tested,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-N--------+MOD_POST:N-+ | | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ +COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) OBJ:V-N (assays,performing) COMP_with:V-N (tested,set) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_in:N-N (performing,vitro) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +-----MOD_ATT:N-N-----+ | | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (transcription,performing) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-----------------COMP_by:N-N-----------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +-----MOD_ATT:N-N-----+ +-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (transcription,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +-----------------COMP_by:N-N-----------------+ | +------------------------OBJ:V-N-----------------------+ | | +----------MOD_ATT:N-N----------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:V-N (assays,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,hypothesis)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +-------------------OBJ:V-N-------------------+ | | +------------------------OBJ:V-N-----------------------+ | +------MOD_POST:N-ADJ-----+ | | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ | | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (hypothesis,vitro) OBJ:V-N (tested,set) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +-----MOD_ATT:N-N-----+ +-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (transcription,performing) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ | +-----------------COMP_by:N-N-----------------+ | +------------------------OBJ:V-N-----------------------+ | +----------MOD_ATT:N-N----------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | +---------------MOD_ATT:N-N--------------+ | +----------MOD_ATT:N-N----------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:V-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) COMP_by:N-N (hypothesis,performing) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,performing)
+------------------------OBJ:V-N-----------------------+ +--------------------------------------------COMP_by:V-N-------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +------------------------COMP_by:V-N------------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-----MOD_ATT:N-N-----+ +-------COMP_with:N-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (transcription,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_by:V-N (tested,set) COMP_of:N-N (set,SPXXX)
+--------------------------------------------COMP_by:V-N-------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-N--------+MOD_POST:N-+ +-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ +COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) MOD_POST:N-ADJ (performing,vitro) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (assays,performing) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V-N (tested,set) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +--------------------------------------------COMP_by:V-N-------------------------------------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-N--------+------------OBJ:V-N------------+-------COMP_with:V-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:V-N (tested,set) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,performing)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ +-------COMP_with:V-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (assays,performing) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------COMP_by:N-N------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +-----MOD_ATT:N-N-----+ +-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (transcription,performing) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:V-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:V-N (assays,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,performing) MOD_ATT:N-N (promoter,GENEXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | | +---------------MOD_ATT:N-N--------------+ | +----------MOD_ATT:N-N----------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:V-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (hypothesis,SPXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +MOD_POST:N-+ +-------COMP_with:V-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_in:N-N (performing,vitro) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (hypothesis,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | +-------------------------------------COMP_by:N-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +-----MOD_ATT:N-N-----+ +-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (transcription,performing) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ | | +---------------MOD_ATT:N-N--------------+ +-----------------COMP_by:N-N-----------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +-----MOD_ATT:N-N-----+ +-------COMP_with:N-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | | | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (transcription,performing) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +-----MOD_ATT:N-N-----+ +-------COMP_with:N-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (transcription,performing) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:V-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:V-N (assays,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (assays,performing) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | +-------------------------------------COMP_by:N-N------------------------------------+ | | +-----------------COMP_by:N-N-----------------+ | | +------------------------OBJ:V-N-----------------------+ | +----------MOD_ATT:N-N----------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:V-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:V-N (assays,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (assays,performing) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------------------------------OBJ:V-N------------------------------------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+ | +-------------------OBJ:V-N-------------------+ | | +-----------------COMP_by:N-N-----------------+ | | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +----------MOD_ATT:N-N----------+ | | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) COMP_in:ADJ-N (transcription,vitro) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) OBJ:V-N (with,regions) COMP_with:V-N (tested,GENEXXX) MOD_ATT:N-N (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +-----MOD_ATT:N-N-----+ +-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (transcription,performing) OBJ:V-N (tested,hypothesis) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------COMP_with:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) SUBJ:V-N (assays,transcription) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +-----MOD_ATT:N-N-----+ +-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (transcription,performing) OBJ:V-N (tested,hypothesis) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +------------OBJ:V-N------------+-------------COMP_with:V-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +MOD_POST:N-+ +-------COMP_with:V-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) COMP_with:V-N (assays,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,performing)
+------------------------OBJ:V-N-----------------------+ +-------------COMP_with:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +------------OBJ:V-N------------+-------------COMP_with:V-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-N--------+MOD_POST:N-+ +-------COMP_with:V-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ +COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) COMP_with:V-N (assays,set) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,performing)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +MOD_POST:N-+ | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_with:V-N (tested,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_in:N-N (performing,vitro) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +---------------MOD_ATT:N-N--------------+ +------------------------------COMP_with:N-N-----------------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +------------------------COMP_by:V-N------------------------+ +-------------------OBJ:V-N-------------------+ | | +----------MOD_ATT:N-N----------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:V-N (tested,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +-----------------COMP_by:N-N-----------------+ | | +------------------------OBJ:V-N-----------------------+ | | +----------MOD_ATT:N-N----------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +---------------MOD_ATT:N-N--------------+ +------------------------------COMP_with:N-N-----------------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +---------------MOD_ATT:N-N--------------+ | +-----------------COMP_by:N-N-----------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +-----MOD_ATT:N-N-----+ | | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (transcription,performing) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-N--------+------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) COMP_in:ADJ-N (transcription,vitro) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-V-+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_by:N-V (hypothesis,performing) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +-----------------COMP_by:N-N-----------------+ | | +------------------------OBJ:V-N-----------------------+ | | +----------MOD_ATT:N-N----------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +---------------MOD_ATT:N-N--------------+ | +-------------------OBJ:V-N-------------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ | | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_in:N-N (performing,vitro) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +-------------------OBJ:V-N-------------------+ | | +-----------------COMP_by:N-N-----------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +-----MOD_ATT:N-N-----+ | | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (transcription,performing) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------COMP_with:V-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (assays,transcription) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+-------------------OBJ:V-N-------------------+ +------------------------OBJ:V-N-----------------------+ +------MOD_POST:N-ADJ-----+ +-------------COMP_with:V-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ +-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (hypothesis,vitro) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_with:V-N (assays,set) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:N-N (hypothesis,performing) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +MOD_POST:N-+ | | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (assays,performing) COMP_with:V-N (tested,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_in:N-N (performing,vitro) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +-------------------OBJ:V-N-------------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ | | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (tested,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_in:N-N (performing,vitro) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ | +-------------COMP_with:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:V-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) SUBJ:V-N (assays,transcription) COMP_of:N-N (GENEXXX,SPXXX) OBJ:V-N (containing,promoter) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------COMP_with:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:V-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) SUBJ:V-N (assays,transcription) COMP_of:N-N (GENEXXX,SPXXX) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ | +-------------COMP_with:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (GENEXXX,SPXXX) OBJ:V-N (containing,promoter) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------COMP_with:V-N------------+ +------------------------OBJ:V-N-----------------------+ | +----------SUBJ:V-N---------+ +---------------MOD_ATT:N-N--------------+ +-------------------OBJ:V-N-------------------+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ +-------COMP_with:V-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) SUBJ:V-N (containing,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_with:V-N (assays,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,set) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | | +---------------MOD_ATT:N-N--------------+ | +----------MOD_ATT:N-N----------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ +----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+-------------COMP_with:V-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +MOD_POST:N-+ +-------COMP_with:V-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) COMP_with:V-N (assays,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (assays,performing) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (hypothesis,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+----------SUBJ:V-N---------+ +---------------MOD_ATT:N-N--------------+ | +------------OBJ:V-N------------+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +MOD_POST:N-+ | | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (assays,performing) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,set) COMP_in:N-N (performing,vitro) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | +-------------------OBJ:V-N-------------------+ | | +----------MOD_ATT:N-N----------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +MOD_POST:N-+ | +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_with:V-N (tested,set) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_in:N-N (performing,vitro) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | | +---------------MOD_ATT:N-N--------------+ +------------------------------COMP_with:N-N-----------------------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_of:N-N (hypothesis,SPXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) OBJ:V-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +---------------MOD_ATT:N-N--------------+ | +------------OBJ:V-N------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +MOD_POST:N-+ | +----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) OBJ:V-N (assays,performing) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_in:N-N (performing,vitro) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ +----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | +---------------MOD_ATT:N-N--------------+ +-----------------COMP_by:N-N-----------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +-----MOD_ATT:N-N-----+ | +----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (transcription,performing) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | +-------------------OBJ:V-N-------------------+ | +-----------------COMP_by:N-N-----------------+ | | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +-----MOD_ATT:N-N-----+ | | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_of:N-N (hypothesis,SPXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (transcription,performing) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-------------COMP_with:V-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:V-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) COMP_by:N-N (hypothesis,performing) SUBJ:V-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX) OBJ:V-N (assays,performing)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | +---------------MOD_ATT:N-N--------------+ | +----------MOD_ATT:N-N----------+-------------COMP_with:N-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ | | | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ +-------------------OBJ:V-N-------------------+ | | +-------------COMP_with:V-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:V-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX) OBJ:V-N (assays,performing)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | +------------------------------------COMP_with:N-N-----------------------------------+ | +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | +------------------------------------COMP_with:N-N-----------------------------------+ | | +------------------------------COMP_with:N-N-----------------------------+ | | +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | | | +---------------MOD_ATT:N-N--------------+ | +----------MOD_ATT:N-N----------+ | | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ | | | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_of:N-N (hypothesis,SPXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:N-N (hypothesis,set) MOD_ATT:N-N (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) COMP_in:ADJ-N (assays,vitro)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | +------------------------------------COMP_with:N-N-----------------------------------+ | +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | +-------------------OBJ:V-N-------------------+ | +-----------------COMP_by:N-N-----------------+ | | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +-----MOD_ATT:N-N-----+ | | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_of:N-N (hypothesis,SPXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) COMP_with:N-N (hypothesis,set) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (transcription,performing) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------OBJ:V-N-----------------------+ +-------------COMP_with:V-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (GENEXXX,SPXXX) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------COMP_with:V-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:V-N------+----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) OBJ:V-N (assays,performing) SUBJ:V-N (assays,transcription) COMP_of:N-N (GENEXXX,SPXXX) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+-------------COMP_with:N-N------------+ +-----------------COMP_by:N-N-----------------+ +----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ | +----------MOD_ATT:N-N----------+ +----COMP_of:N-N----+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +MOD_POST:N-+ | +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_with:V-N (tested,set) SUBJ:V-N (containing,SPXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_in:N-N (performing,vitro) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------COMP_of:N-N---------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-------------COMP_with:V-N------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-N--------+------------OBJ:V-N------------+-------COMP_with:V-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_of:N-N (performing,SPXXX) COMP_with:V-N (assays,GENEXXX) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (assays,performing) MOD_ATT:N-N (promoter,GENEXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+-------------COMP_with:V-N------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ +-------COMP_with:V-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) COMP_with:V-N (assays,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (regions,GENEXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (tested,set) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------SUBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+------------------COMP_of:N-N-----------------+ +------------------------OBJ:V-N-----------------------+ | +----------MOD_ATT:N-N----------+-------------COMP_with:N-N------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) SUBJ:V-N (containing,assays) COMP_of:N-N (assays,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +COMP_in:N-N+ | | | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+MOD_POST:N-+ +-SUBJ:V-N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_of:N-N (hypothesis,SPXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) OBJ:V-N (assays,performing) COMP_in:N-N (performing,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +-------------------OBJ:V-N-------------------+ +----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ | +------MOD_POST:N-ADJ-----+ | +----COMP_of:N-N----+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ | | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) SUBJ:V-N (containing,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,set) MOD_POST:N-ADJ (hypothesis,vitro) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) COMP_in:N-N (hypothesis,vitro)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (assays,performing) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | +------------------------------------COMP_with:N-N-----------------------------------+ | +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_of:N-N (hypothesis,SPXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) OBJ:V-N (assays,performing) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX)
+---------------------------------------SUBJ:V-N---------------------------------------+------------------------OBJ:V-N-----------------------+ | +-------------COMP_with:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-N--------+------------OBJ:V-N------------+-------COMP_with:V-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) SUBJ:V-N (assays,transcription) SUBJ:V-N (containing,performing) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) COMP_by:V-N (tested,performing) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ | +---------------MOD_ATT:N-N--------------+ +------MOD_POST:N-ADJ-----+ +-------------COMP_with:V-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ +-------COMP_with:V-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (hypothesis,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,set) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_by:N-N (hypothesis,performing) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------SUBJ:V-N----------------------------------------------+ +---------------MOD_ATT:N-N--------------+ | +-------------COMP_with:V-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:V-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) OBJ:V-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,hypothesis) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (tested,set) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (assays,performing) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+-----------------------SUBJ:V-N-----------------------+-------------------OBJ:V-N-------------------+ | | +----------MOD_ATT:N-N----------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,assays) MOD:V-ADV (tested,directly) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | +---------------MOD_ATT:N-N--------------+ | +----------MOD_ATT:N-N----------+-------------COMP_with:N-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,performing) COMP_in:ADJ-N (assays,vitro) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------SUBJ:V-N----------------------------------------------+-------------------OBJ:V-N-------------------+ | | +------------OBJ:V-N------------+-------------COMP_with:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +MOD_POST:N-+ +-------COMP_with:V-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) OBJ:V-N (containing,promoter) COMP_with:V-N (assays,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,performing)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +MOD_POST:N-+ +-------COMP_with:V-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (assays,performing) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +-----------------COMP_by:N-N-----------------+ | | +------------------------OBJ:V-N-----------------------+ | +----------MOD_ATT:N-N----------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_by:N-N (hypothesis,performing) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ | +-------------------OBJ:V-N-------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ +-------COMP_with:V-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (tested,set) MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-----------------COMP_by:N-N-----------------+ | | +---------------MOD_ATT:N-N--------------+ | | +----------MOD_ATT:N-N----------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ +-------------------OBJ:V-N-------------------+ | | +------------OBJ:V-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +MOD_POST:N-+ +-------COMP_with:V-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +---------------MOD_ATT:N-N--------------+ | +-----------------COMP_by:N-N-----------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +-----MOD_ATT:N-N-----+ | | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (transcription,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ | +----------------------------------------------OBJ:V-N---------------------------------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | +-------------------OBJ:V-N-------------------+ | | +----------MOD_ATT:N-N----------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) MOD:V-ADV (tested,directly) COMP_with:N-N (hypothesis,set) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-----------------COMP_by:N-N-----------------+ | +-------------------OBJ:V-N-------------------+ | | | +----------MOD_ATT:N-N----------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ | +-----------------COMP_by:N-N-----------------+ | | | +---------------MOD_ATT:N-N--------------+ | | +----------MOD_ATT:N-N----------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-------------------OBJ:V-N-------------------+ | +-------------------OBJ:V-N-------------------+ | | +------MOD_POST:N-ADJ-----+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ +-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (hypothesis,vitro) OBJ:V-N (tested,set) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (hypothesis,vitro) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+---------------------------------------SUBJ:V-N---------------------------------------+------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+-------------COMP_with:V-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-N--------+MOD_POST:N-+ +-------COMP_with:V-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ +COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) SUBJ:V-N (containing,performing) COMP_with:V-N (assays,set) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,performing)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (assays,performing) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +MOD_POST:N-+ +-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (assays,performing) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------SUBJ:V-N----------------------------------------------+-------------------OBJ:V-N-------------------+ | +-------------------------------------COMP_by:N-N------------------------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:V-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) COMP_by:N-N (hypothesis,set) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,performing)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ +-------------------OBJ:V-N-------------------+ | | +------------OBJ:V-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +MOD_POST:N-+ +-------COMP_with:V-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------COMP_by:N-N------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | +---------------MOD_ATT:N-N--------------+ | +----------MOD_ATT:N-N----------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +-------------------------------------COMP_by:N-N------------------------------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:V-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_by:N-N (hypothesis,performing) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,performing)
+------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,performing)
+------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ +-------------------OBJ:V-N-------------------+ | | +------------OBJ:V-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +MOD_POST:N-+ +-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +-----MOD_ATT:N-N-----+ +-------COMP_with:N-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (transcription,performing) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+-------------------------------------COMP_by:N-N------------------------------------+ +-----------------COMP_by:N-N-----------------+ | +------------------------OBJ:V-N-----------------------+ | +----------MOD_ATT:N-N----------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ | +-----------------COMP_by:N-N-----------------+ | | +------------------------OBJ:V-N-----------------------+ | +----------MOD_ATT:N-N----------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (assays,transcription) COMP_of:N-N (hypothesis,SPXXX)
+--------------------------------------------COMP_by:V-N-------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +---------------------------------------SUBJ:V-N---------------------------------------+ +---------------MOD_ATT:N-N--------------+ | +----------------------------------COMP_of:N-N---------------------------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-N--------+------------OBJ:V-N------------+-------COMP_with:V-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_of:N-N (performing,SPXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:ADJ-N (transcription,vitro) SUBJ:V-N (containing,performing) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (assays,performing) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ | +-------------------OBJ:V-N-------------------+ | | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +MOD_POST:N-+ +-------COMP_with:V-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_with:V-N (assays,GENEXXX) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:N-N (performing,vitro) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (hypothesis,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:V-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (hypothesis,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | +-------------------------------------COMP_by:N-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | +-------------------OBJ:V-N-------------------+ | | +----------MOD_ATT:N-N----------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) COMP_by:N-N (hypothesis,set) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (hypothesis,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ | | +---------------MOD_ATT:N-N--------------+ | +------------OBJ:V-N------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ +-------COMP_with:V-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) OBJ:V-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_in:N-N (performing,vitro) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (regions,GENEXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ +-------COMP_with:V-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (assays,performing) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_in:N-N (performing,vitro) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (regions,GENEXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | +-------------------------------------COMP_by:N-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ +-------COMP_with:V-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (assays,performing) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_in:N-N (performing,vitro) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (regions,GENEXXX)
+------------------------------------------------OBJ:V-N------------------------------------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+ | | | +-----------------COMP_by:N-N-----------------+ | | | +-------------------OBJ:V-N-------------------+ | | | +----------MOD_ATT:N-N----------+ | | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) OBJ:V-N (with,regions) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +-------------COMP_with:V-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:V-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) OBJ:V-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ | +---------------MOD_ATT:N-N--------------+ +------------OBJ:V-N------------+-------------COMP_with:V-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +MOD_POST:N-+ +-------COMP_with:V-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) COMP_with:V-N (assays,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,performing)
+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ | +-----------------COMP_by:N-N-----------------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +-----MOD_ATT:N-N-----+ +-------COMP_with:N-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (transcription,performing) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ | +---------------MOD_ATT:N-N--------------+ +------MOD_POST:N-ADJ-----+ +-------------COMP_with:V-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ +-------COMP_with:V-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (hypothesis,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_with:V-N (assays,set) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ | +-----------------COMP_by:N-N-----------------+-------------COMP_with:N-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +-----MOD_ATT:N-N-----+ +-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (transcription,performing) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ | +---------------MOD_ATT:N-N--------------+ +------MOD_POST:N-ADJ-----+ +-------------COMP_with:V-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ +-------COMP_with:V-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (hypothesis,vitro) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_with:V-N (assays,set) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ | +-------------COMP_with:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (set,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+ | | +-------------------OBJ:V-N-------------------+ | | +----------MOD_ATT:N-N----------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) MOD:V-ADV (tested,directly) COMP_with:N-N (hypothesis,set) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +-------------------OBJ:V-N-------------------+ | | | +---------------MOD_ATT:N-N--------------+ | +------MOD_POST:N-ADJ-----+ | | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ | | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_POST:N-ADJ (hypothesis,vitro) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) COMP_in:N-N (hypothesis,vitro)
+------------------------OBJ:V-N-----------------------+ +-----------------COMP_by:N-N-----------------+-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +-----MOD_ATT:N-N-----+ +-------COMP_with:N-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (transcription,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+-------------COMP_with:V-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ +-------COMP_with:V-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) COMP_with:V-N (assays,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:N-N (hypothesis,performing) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+-----------------COMP_by:N-N-----------------+ +------------------------OBJ:V-N-----------------------+ | +----------MOD_ATT:N-N----------+-------------COMP_with:N-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+-------COMP_with:N-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (assays,set) COMP_with:N-N (assays,GENEXXX) COMP_by:N-N (hypothesis,assays) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (assays,transcription) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +MOD_POST:N-+ | | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (assays,performing) COMP_with:V-N (tested,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_in:N-N (performing,vitro) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | | +-------------------OBJ:V-N-------------------+ | | +------------------------OBJ:V-N-----------------------+ | +------MOD_POST:N-ADJ-----+ | | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ | | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (tested,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_POST:N-ADJ (hypothesis,vitro) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) COMP_in:N-N (hypothesis,vitro)
+-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------------------------COMP_with:V-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +-------------------OBJ:V-N-------------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ | | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (tested,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_in:N-N (performing,vitro) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ | +----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------COMP_of:N-N---------------------------------+ | +---------------MOD_ATT:N-N--------------+ +------------OBJ:V-N------------+-------------COMP_with:V-N------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-N--------+MOD_POST:N-+ +-------COMP_with:V-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ +COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) COMP_of:N-N (performing,SPXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) COMP_with:V-N (assays,set) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (assays,performing) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX)
+---------------------------------------SUBJ:V-N---------------------------------------+------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+-------------COMP_with:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-N--------+MOD_POST:N-+ +-------COMP_with:V-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ +COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) COMP_of:N-N (GENEXXX,SPXXX) COMP_with:V-N (assays,set) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,performing)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +COMP_in:N-N+ | | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+MOD_POST:N-+ +-SUBJ:V-N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_in:N-N (performing,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | +---------------MOD_ATT:N-N--------------+ | +------------OBJ:V-N------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ | +----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) OBJ:V-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,hypothesis) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_in:N-N (performing,vitro) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+---------------------------------------SUBJ:V-N---------------------------------------+ +----------------------------------COMP_of:N-N---------------------------------+ | +-----------------------------COMP_with:N-N----------------------------+ | +------------------------OBJ:V-N-----------------------+ +-----------------------COMP_with:N-N----------------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-N--------+------------OBJ:V-N------------+ | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (performing,set) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (performing,SPXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_with:N-N (performing,GENEXXX) SUBJ:V-N (containing,performing) COMP_in:ADJ-N (transcription,vitro) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription)
+------------------------------------------------OBJ:V-N------------------------------------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------OBJ:V-N-------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) COMP_with:V-N (tested,set) COMP_in:ADJ-N (transcription,vitro) SUBJ:V-N (containing,SPXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (with,regions) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+---------------------------------------SUBJ:V-N---------------------------------------+ +----------------------------------COMP_of:N-N---------------------------------+ | +-----------------------------COMP_with:N-N----------------------------+ | | +-----------------------COMP_with:N-N----------------------+ | | +------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+ | | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-N--------+MOD_POST:N-+ | | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ +COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_of:N-N (performing,SPXXX) COMP_with:N-N (performing,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_in:N-N (performing,vitro) COMP_with:N-N (performing,set) SUBJ:V-N (containing,performing) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX)
+---------------------------------------SUBJ:V-N---------------------------------------+------------------------OBJ:V-N-----------------------+ +----------------------------------COMP_of:N-N---------------------------------+ +-------------------OBJ:V-N-------------------+ | | +-------------COMP_with:V-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-N--------+------------OBJ:V-N------------+-------COMP_with:V-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_of:N-N (performing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) SUBJ:V-N (containing,performing) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) OBJ:V-N (assays,performing)
+----------------------------------COMP_of:N-N---------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-------------COMP_with:V-N------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:V-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_of:N-N (performing,SPXXX) COMP_with:V-N (assays,GENEXXX) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (assays,performing) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------------COMP_with:N-N-----------------------------+----------SUBJ:V-N---------+------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ +----COMP_of:N-N----+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ | | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) SUBJ:V-N (containing,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,set) COMP_in:N-N (performing,vitro) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+---------------------------------------SUBJ:V-N---------------------------------------+------------------------OBJ:V-N-----------------------+ | +-------------COMP_with:V-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:V-N------+----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (assays,performing) SUBJ:V-N (assays,transcription) SUBJ:V-N (containing,performing) COMP_of:N-N (GENEXXX,SPXXX) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+---------------------------------------SUBJ:V-N---------------------------------------+------------------------OBJ:V-N-----------------------+ | +-------------COMP_with:V-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-N--------+------------OBJ:V-N------------+-------COMP_with:V-N------+----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (assays,performing) SUBJ:V-N (assays,transcription) SUBJ:V-N (containing,performing) COMP_of:N-N (GENEXXX,SPXXX) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) COMP_by:V-N (tested,performing) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+-------------COMP_with:V-N------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ +-------COMP_with:V-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) COMP_with:V-N (assays,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (regions,GENEXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+-------------COMP_with:V-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ +-------COMP_with:V-N------+----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) SUBJ:V-N (containing,hypothesis) COMP_of:N-N (GENEXXX,SPXXX) COMP_with:V-N (assays,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+---------------------------------------SUBJ:V-N---------------------------------------+ +----------------------------------COMP_of:N-N---------------------------------+ | +-----------------------------COMP_with:N-N----------------------------+ | +------------------------OBJ:V-N-----------------------+ +-----------------------COMP_with:N-N----------------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-N--------+------------OBJ:V-N------------+ | | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (performing,set) COMP_of:N-N (performing,SPXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) OBJ:V-N (assays,performing) COMP_with:N-N (performing,GENEXXX) SUBJ:V-N (containing,performing) COMP_in:ADJ-N (transcription,vitro) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX)
+---------------------------------------SUBJ:V-N---------------------------------------+ +----------------------------------COMP_of:N-N---------------------------------+ | +-----------------------------COMP_with:N-N----------------------------+ | | +-----------------------COMP_with:N-N----------------------+ | | +------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+ | | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-N--------+MOD_POST:N-+ | | | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ +COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_of:N-N (performing,SPXXX) COMP_with:N-N (performing,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (assays,performing) COMP_in:N-N (performing,vitro) COMP_with:N-N (performing,set) SUBJ:V-N (containing,performing) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+-------------COMP_with:V-N------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ +-------COMP_with:V-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) COMP_with:V-N (assays,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (regions,GENEXXX)
+---------------------------------------SUBJ:V-N---------------------------------------+------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+-------------COMP_with:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +MOD_POST:N-+ +-------COMP_with:V-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) SUBJ:V-N (containing,performing) COMP_with:V-N (assays,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,performing)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------SUBJ:V-N----------------------------------------------+ +---------------MOD_ATT:N-N--------------+ +-------------------OBJ:V-N-------------------+-------------COMP_with:V-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ +-------COMP_with:V-N------+ | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) COMP_with:V-N (assays,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+-------------COMP_with:V-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ +-------COMP_with:V-N------+ | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) COMP_with:V-N (assays,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,hypothesis) COMP_by:N-N (hypothesis,performing) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ | | +------------OBJ:V-N------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ | | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) OBJ:V-N (assays,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_in:N-N (performing,vitro) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+--------------------------------------------COMP_by:V-N-------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-----------------------COMP_with:N-N----------------------+ | | +---------------MOD_ATT:N-N--------------+ | +------------OBJ:V-N------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-N--------+MOD_POST:N-+ | | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ +COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) OBJ:V-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_in:N-N (performing,vitro) COMP_with:N-N (performing,GENEXXX) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_by:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+--------------------------------------------COMP_by:V-N-------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-----------------------COMP_with:N-N----------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-N--------+------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (performing,GENEXXX) COMP_in:ADJ-N (transcription,vitro) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:V-N (tested,set) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +--------------------------------------------COMP_by:V-N-------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ | +----------------------------------COMP_of:N-N---------------------------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-N--------+------------OBJ:V-N------------+-------COMP_with:V-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_of:N-N (performing,SPXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:ADJ-N (transcription,vitro) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (assays,performing) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_by:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+--------------------------------------------COMP_by:V-N-------------------------------------------+ | +---------------------------------------SUBJ:V-N---------------------------------------+ | +----------------------------------COMP_of:N-N---------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-N--------+MOD_POST:N-+ +-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ +COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) COMP_of:N-N (performing,SPXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,performing) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V-N (tested,set) COMP_of:N-N (set,SPXXX)
+--------------------------------------------COMP_by:V-N-------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +----------------------------------COMP_of:N-N---------------------------------+ +-------------------OBJ:V-N-------------------+ | | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-N--------+MOD_POST:N-+ +-------COMP_with:V-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ +COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) COMP_of:N-N (performing,SPXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (assays,performing) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) SUBJ:V-N (containing,SPXXX) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V-N (tested,set) COMP_of:N-N (set,SPXXX)
+--------------------------------------------COMP_by:V-N-------------------------------------------+ | +----------------------------------COMP_of:N-N---------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-N--------+MOD_POST:N-+ +-------COMP_with:V-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ +COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) COMP_of:N-N (performing,SPXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) SUBJ:V-N (containing,SPXXX) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+--------------------------------------------COMP_by:V-N-------------------------------------------+ | +---------------------------------------SUBJ:V-N---------------------------------------+ | +----------------------------------COMP_of:N-N---------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-N--------+MOD_POST:N-+ +-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ +COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) COMP_of:N-N (performing,SPXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,performing) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ | +-----------------------------------------COMP_of:N-N----------------------------------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (tested,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | | +-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-------------------OBJ:V-N-------------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +MOD_POST:N-+ +-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (tested,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) SUBJ:V-N (containing,hypothesis) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,set) COMP_in:N-N (performing,vitro) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (hypothesis,SPXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ | +-----------------------------------------COMP_of:N-N----------------------------------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (tested,set) OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | | +-----------------------------------------COMP_of:N-N----------------------------------------+ | | +-------------------OBJ:V-N-------------------+ | | +------------------------OBJ:V-N-----------------------+ | +------MOD_POST:N-ADJ-----+ | | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ +-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (hypothesis,vitro) OBJ:V-N (tested,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (hypothesis,vitro) SUBJ:V-N (containing,hypothesis) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,set) COMP_of:N-N (hypothesis,SPXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | | +-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-------------------OBJ:V-N-------------------+ | | | +---------------MOD_ATT:N-N--------------+ | +------MOD_POST:N-ADJ-----+ | | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ +-------COMP_with:V-N------+ +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (hypothesis,vitro) OBJ:V-N (tested,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (hypothesis,vitro) SUBJ:V-N (containing,hypothesis) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,set) COMP_of:N-N (hypothesis,SPXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------------------------------OBJ:V-N------------------------------------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+ | | | +-----------------COMP_by:N-N-----------------+ | | | +-------------------OBJ:V-N-------------------+ | | | +----------MOD_ATT:N-N----------+ | | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | | +---COMP_in:ADJ-N---+ | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | | +MOD_ATT:N+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_by:N-N (hypothesis,assays) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_in:ADJ-N (assays,vitro) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) OBJ:V-N (with,regions) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (assays,performing) MOD_ATT:N-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +MOD_POST:N-+ | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_in:N-N (performing,vitro) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-----------------------------COMP_with:N-N----------------------------+ | +---------------MOD_ATT:N-N--------------+ +-----------------------COMP_with:N-N----------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-N--------+------------OBJ:V-N------------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (performing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (performing,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +---------------MOD_ATT:N-N--------------+ +------------------------------COMP_with:N-N-----------------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (assays,performing) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (set,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ | | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) OBJ:V-N (assays,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_in:N-N (performing,vitro) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------------COMP_with:N-N----------------------------+ +-----------------------COMP_with:N-N----------------------+ | +------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-N--------+MOD_POST:N-+ | | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ +COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (performing,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (assays,performing) COMP_in:N-N (performing,vitro) COMP_with:N-N (performing,set) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------------COMP_with:N-N----------------------------+ +------------------------OBJ:V-N-----------------------+ +-----------------------COMP_with:N-N----------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-N--------+------------OBJ:V-N------------+ +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (performing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (performing,GENEXXX) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (assays,performing) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------COMP_of:N-N---------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+-------------COMP_with:V-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +MOD_POST:N-+ +-------COMP_with:V-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) COMP_of:N-N (performing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) COMP_with:V-N (assays,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (assays,performing) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------OBJ:V-N-----------------------+ +-----------------------------COMP_with:N-N----------------------------+ +-------------------OBJ:V-N-------------------+ | +-----------------------COMP_with:N-N----------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-N--------+------------OBJ:V-N------------+ +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) COMP_with:N-N (performing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (performing,GENEXXX) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) OBJ:V-N (containing,promoter) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------COMP_of:N-N---------------------------------+ +-----------------------------COMP_with:N-N----------------------------+ | +------------------------OBJ:V-N-----------------------+ +-----------------------COMP_with:N-N----------------------+ | | | +---------------MOD_ATT:N-N--------------+ +------------OBJ:V-N------------+ | | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +MOD_POST:N-+ | | | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_of:N-N (performing,SPXXX) COMP_with:N-N (performing,GENEXXX) OBJ:V-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_in:N-N (performing,vitro) COMP_with:N-N (performing,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX)
+---------------------------------------SUBJ:V-N---------------------------------------+ +-----------------------------COMP_with:N-N----------------------------+ | +-----------------------COMP_with:N-N----------------------+ | +------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +MOD_POST:N-+ | +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (performing,GENEXXX) SUBJ:V-N (containing,performing) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_in:N-N (performing,vitro) COMP_with:N-N (performing,set) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------------COMP_with:N-N----------------------------+ +------------------------OBJ:V-N-----------------------+ +-----------------------COMP_with:N-N----------------------+----------SUBJ:V-N---------+-------------------OBJ:V-N-------------------+ | +------------OBJ:V-N------------+ +----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-N--------+MOD_POST:N-+ | | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ +COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (performing,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_in:N-N (performing,vitro) SUBJ:V-N (containing,GENEXXX) COMP_with:N-N (performing,set) COMP_of:N-N (GENEXXX,SPXXX) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,set) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------SUBJ:V-N----------------------------------------------+ +---------------MOD_ATT:N-N--------------+ | +-------------COMP_with:V-N------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (GENEXXX,SPXXX) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +---------------------------------------SUBJ:V-N---------------------------------------+-------------------OBJ:V-N-------------------+ | +------------OBJ:V-N------------+-------------COMP_with:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +MOD_POST:N-+ +-------COMP_with:V-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,performing) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) COMP_of:N-N (GENEXXX,SPXXX) COMP_with:V-N (assays,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,performing)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-------------------OBJ:V-N-------------------+ +------------------------OBJ:V-N-----------------------+ +------MOD_POST:N-ADJ-----+ +-------------COMP_with:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ +-------COMP_with:V-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (hypothesis,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) SUBJ:V-N (containing,hypothesis) COMP_of:N-N (GENEXXX,SPXXX) COMP_with:V-N (assays,set) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+---------------------------------------SUBJ:V-N---------------------------------------+ +----------------------------------COMP_of:N-N---------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+-------------COMP_with:V-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +MOD_POST:N-+ +-------COMP_with:V-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) COMP_of:N-N (performing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) SUBJ:V-N (containing,performing) COMP_with:V-N (assays,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (assays,performing) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------COMP_of:N-N---------------------------------+ +-----------------------------COMP_with:N-N----------------------------+ | +------------------------OBJ:V-N-----------------------+ +-----------------------COMP_with:N-N----------------------+ | | +-------------------OBJ:V-N-------------------+ | +------------OBJ:V-N------------+ | | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-N--------+MOD_POST:N-+ | | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ +COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_of:N-N (performing,SPXXX) COMP_with:N-N (performing,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_in:N-N (performing,vitro) COMP_with:N-N (performing,set) OBJ:V-N (containing,promoter) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ | +----------------------------------COMP_of:N-N---------------------------------+ +------------------------OBJ:V-N-----------------------+ | | +-------------COMP_with:V-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:V-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_of:N-N (performing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) COMP_by:N-N (hypothesis,performing) SUBJ:V-N (assays,transcription) OBJ:V-N (assays,performing)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------SUBJ:V-N----------------------------------------------+-------------------OBJ:V-N-------------------+ | | +-------------COMP_with:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (GENEXXX,SPXXX) OBJ:V-N (containing,promoter) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ | +----------------------------------COMP_of:N-N---------------------------------+ | | +-----------------------------COMP_with:N-N----------------------------+ | +------------------------OBJ:V-N-----------------------+ | +-----------------------COMP_with:N-N----------------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (performing,set) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (performing,SPXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_with:N-N (performing,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ +-------------------OBJ:V-N-------------------+ | +------MOD_POST:N-ADJ-----+ +-------------COMP_with:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ +-------COMP_with:V-N------+----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (hypothesis,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) COMP_with:V-N (assays,GENEXXX) SUBJ:V-N (containing,hypothesis) COMP_of:N-N (GENEXXX,SPXXX) COMP_with:V-N (assays,set) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+------------------------------------------------OBJ:V-N------------------------------------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+----------SUBJ:V-N---------+-------------------OBJ:V-N-------------------+ | | +------------OBJ:V-N------------+ | +----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +MOD_POST:N-+ | | | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_with:V-N (tested,set) SUBJ:V-N (containing,GENEXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (with,regions) COMP_in:N-N (performing,vitro) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+-------------COMP_with:V-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +MOD_POST:N-+ +-------COMP_with:V-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (performing,vitro) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) COMP_with:V-N (assays,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (hypothesis,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ | +-------------------OBJ:V-N-------------------+ | +------MOD_POST:N-ADJ-----+ +-------------COMP_with:V-N------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ +-------COMP_with:V-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (hypothesis,vitro) COMP_of:N-N (hypothesis,SPXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) OBJ:V-N (containing,promoter) COMP_with:V-N (assays,set) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+---------------------------------------SUBJ:V-N---------------------------------------+ +-----------------------------COMP_with:N-N----------------------------+ +------------------------OBJ:V-N-----------------------+ +-----------------------COMP_with:N-N----------------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+ +----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (performing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (performing,GENEXXX) COMP_in:ADJ-N (transcription,vitro) SUBJ:V-N (containing,performing) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ | +-------------COMP_with:V-N------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+----COMP_of:N-N----+ | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (GENEXXX,SPXXX) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,hypothesis) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) COMP_of:N-N (hypothesis,SPXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX)
+---------------------------------------SUBJ:V-N---------------------------------------+------------------------OBJ:V-N-----------------------+ +-----------------------------COMP_with:N-N----------------------------+ | +---------------MOD_ATT:N-N--------------+ +-----------------------COMP_with:N-N----------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (performing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (performing,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +---------------------------------------SUBJ:V-N---------------------------------------+-------------------OBJ:V-N-------------------+ | | +-------------COMP_with:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+-------COMP_with:V-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) SUBJ:V-N (assays,transcription) SUBJ:V-N (containing,performing) COMP_with:V-N (assays,set) COMP_in:ADJ-N (transcription,vitro) COMP_with:V-N (assays,GENEXXX) MOD:V-ADV (tested,directly) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+---------------------------------------SUBJ:V-N---------------------------------------+ +-----------------------------COMP_with:N-N----------------------------+ +------------------------OBJ:V-N-----------------------+ +-----------------------COMP_with:N-N----------------------+ | | +---------------MOD_ATT:N-N--------------+ +------------OBJ:V-N------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+--------COMP_by:V-N--------+MOD_POST:N-+ | | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+ +COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (performing,GENEXXX) OBJ:V-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_in:N-N (performing,vitro) COMP_with:N-N (performing,set) SUBJ:V-N (containing,performing) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +-----------------------COMP_with:N-N----------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +MOD_POST:N-+ | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) MOD_POST:N-ADJ (performing,vitro) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_in:N-N (performing,vitro) COMP_with:N-N (performing,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +---------------MOD_ATT:N-N--------------+ +------------------------------COMP_with:N-N-----------------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +MOD_POST:N-+ | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_in:N-N (performing,vitro) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | +---------------MOD_ATT:N-N--------------+ | +-----------------------COMP_with:N-N----------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (performing,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ +-------------------OBJ:V-N-------------------+ | +------MOD_POST:N-ADJ-----+ +-------------COMP_with:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ +-------COMP_with:V-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (hypothesis,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) OBJ:V-N (containing,promoter) COMP_with:V-N (assays,set) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (tested,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (tested,set) SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +-------------------OBJ:V-N-------------------+ | | +------------------------OBJ:V-N-----------------------+ | +------MOD_POST:N-ADJ-----+ | | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (hypothesis,vitro) OBJ:V-N (tested,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ | +-----------------------------COMP_with:N-N----------------------------+ | | +-----------------------COMP_with:N-N----------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ | | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (performing,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (assays,performing) COMP_in:N-N (performing,vitro) COMP_with:N-N (performing,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +-----------------------COMP_with:N-N----------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +MOD_POST:N-+ | | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (assays,performing) COMP_in:N-N (performing,vitro) COMP_with:N-N (performing,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ | +-------------------OBJ:V-N-------------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ | | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (tested,set) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_in:N-N (performing,vitro) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ | +---------------MOD_ATT:N-N--------------+ | +-----------------------COMP_with:N-N----------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (performing,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (assays,performing) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (set,SPXXX)
+-------------------------------------COMP_by:N-N------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-----------------------COMP_with:N-N----------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (performing,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (set,SPXXX)
+-------------------------------------COMP_by:N-N------------------------------------+ | +-----------------------COMP_with:N-N----------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +MOD_POST:N-+ | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_in:N-N (performing,vitro) COMP_with:N-N (performing,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+--------------------------------------------COMP_by:V-N-------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-----------------------COMP_with:N-N----------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-N--------+------------OBJ:V-N------------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (performing,GENEXXX) COMP_in:ADJ-N (transcription,vitro) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:V-N (tested,set) COMP_of:N-N (set,SPXXX)
+-------------------------------------COMP_by:N-N------------------------------------+ | +-----------------------COMP_with:N-N----------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +MOD_POST:N-+ | | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) MOD_POST:N-ADJ (performing,vitro) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_in:N-N (performing,vitro) COMP_with:N-N (performing,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+--------------------------------------------COMP_by:V-N-------------------------------------------+ | +-----------------------COMP_with:N-N----------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-N--------+MOD_POST:N-+ | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ +COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_in:N-N (performing,vitro) COMP_with:N-N (performing,GENEXXX) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V-N (tested,set) COMP_of:N-N (set,SPXXX)
+-------------------------------------COMP_by:N-N------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-----------------------COMP_with:N-N----------------------+ | | +---------------MOD_ATT:N-N--------------+ | +------------OBJ:V-N------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ | | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) OBJ:V-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_in:N-N (performing,vitro) COMP_with:N-N (performing,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ | | +-----------------------COMP_with:N-N----------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ | | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (assays,performing) COMP_in:N-N (performing,vitro) COMP_with:N-N (performing,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ | +---------------MOD_ATT:N-N--------------+ | +----------------------------------COMP_of:N-N---------------------------------+ | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:V-N------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_of:N-N (performing,SPXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (assays,performing) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-------------------------------------COMP_by:N-N------------------------------------+ | +----------------------------------COMP_of:N-N---------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +MOD_POST:N-+ +-------COMP_with:V-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) COMP_of:N-N (performing,SPXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) SUBJ:V-N (containing,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+--------------------------------------------COMP_by:V-N-------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-----------------------COMP_with:N-N----------------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-N--------+------------OBJ:V-N------------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (performing,GENEXXX) COMP_in:ADJ-N (transcription,vitro) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (assays,performing) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_by:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+-------------------------------------COMP_by:N-N------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +----------------------------------COMP_of:N-N---------------------------------+ +-------------------OBJ:V-N-------------------+ | | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +MOD_POST:N-+ +-------COMP_with:V-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) COMP_of:N-N (performing,SPXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) OBJ:V-N (assays,performing) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) SUBJ:V-N (containing,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+--------------------------------------------COMP_by:V-N-------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-----------------------COMP_with:N-N----------------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+--------COMP_by:V-N--------+------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (performing,GENEXXX) COMP_in:ADJ-N (transcription,vitro) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (assays,performing) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) MOD_ATT:N-N (regions,GENEXXX) COMP_by:V-N (tested,set) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+---------------------------------------SUBJ:V-N---------------------------------------+------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ +-------------------OBJ:V-N-------------------+ | | +----------------------------------COMP_of:N-N---------------------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_of:N-N (performing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) COMP_with:V-N (assays,GENEXXX) COMP_in:ADJ-N (transcription,vitro) SUBJ:V-N (containing,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+---------------------------------------SUBJ:V-N---------------------------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +----------------------------------COMP_of:N-N---------------------------------+ +-------------------OBJ:V-N-------------------+ | | +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +MOD_POST:N-+ +-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) COMP_of:N-N (performing,SPXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,performing) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,set) COMP_by:N-N (hypothesis,set) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +----------------------------------COMP_of:N-N---------------------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:V-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_of:N-N (performing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (assays,performing) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ | | +---------------MOD_ATT:N-N--------------+ | +-----------------------COMP_with:N-N----------------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (performing,GENEXXX) OBJ:V-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (hypothesis,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | +-------------------------------------COMP_by:N-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +-----------------------COMP_with:N-N----------------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (performing,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (hypothesis,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | +-------------------------------------COMP_by:N-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +-----------------------COMP_with:N-N----------------------+ | | | +---------------MOD_ATT:N-N--------------+ | +------------OBJ:V-N------------+ | | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ | | | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) OBJ:V-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (performing,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_in:N-N (performing,vitro) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (regions,GENEXXX)
+-------------------------------------COMP_by:N-N------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +----------------------------------COMP_of:N-N---------------------------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:V-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_of:N-N (performing,SPXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (assays,performing) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +----------------------------------COMP_of:N-N---------------------------------+ | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+-------COMP_with:V-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_of:N-N (performing,SPXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (assays,performing) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-----------------------------------------COMP_of:N-N----------------------------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (tested,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (hypothesis,SPXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +-----------------------------------------COMP_of:N-N----------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-------------------OBJ:V-N-------------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +MOD_POST:N-+ +-------COMP_with:V-N------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (tested,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) SUBJ:V-N (containing,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:N-N (performing,vitro) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (hypothesis,SPXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-----------------------------------------COMP_of:N-N----------------------------------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (tested,set) OBJ:V-N (containing,regions) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (hypothesis,SPXXX) COMP_of:N-N (set,SPXXX)
+------------------------------------------------OBJ:V-N------------------------------------------------+ | +-------------------OBJ:V-N-------------------+ | +------------OBJ:V-N------------+-------------COMP_with:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +MOD_POST:N-+ +-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (containing,set) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) COMP_with:V-N (assays,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (with,regions) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,performing)
+------------------------------------------------OBJ:V-N------------------------------------------------+ | +-------------------OBJ:V-N-------------------+ | +-------------------OBJ:V-N-------------------+-------------COMP_with:V-N------------+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +MOD_POST:N-+ +-------COMP_with:V-N------+ | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ | +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (performing,vitro) SUBJ:V-N (containing,SPXXX) COMP_with:V-N (assays,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (with,regions) OBJ:V-N (tested,hypothesis) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX) OBJ:V-N (assays,hypothesis)
+------------------------------------------------OBJ:V-N------------------------------------------------+ +-------------------------------------------COMP_with:V-N------------------------------------------+ +-------------------OBJ:V-N-------------------+ | +-------------------------------------COMP_with:V-N------------------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ | +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (tested,set) COMP_in:ADJ-N (transcription,vitro) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) OBJ:V-N (with,regions) COMP_with:V-N (tested,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +-----------------------------------------COMP_of:N-N----------------------------------------+ | +-------------------OBJ:V-N-------------------+ | | +------------------------OBJ:V-N-----------------------+ | +------MOD_POST:N-ADJ-----+ | | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ +-------COMP_with:V-N------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (hypothesis,vitro) OBJ:V-N (tested,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) SUBJ:V-N (containing,SPXXX) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_of:N-N (hypothesis,SPXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ | | +-----------------------------------------COMP_of:N-N----------------------------------------+ | | +-------------------OBJ:V-N-------------------+ | | +------------------------OBJ:V-N-----------------------+ | +------MOD_POST:N-ADJ-----+ | | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ +-------COMP_with:V-N------+ +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (hypothesis,vitro) OBJ:V-N (tested,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (assays,GENEXXX) COMP_in:N-N (hypothesis,vitro) SUBJ:V-N (containing,hypothesis) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,set) COMP_of:N-N (hypothesis,SPXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------------COMP_with:N-N----------------------------+ +------------------------OBJ:V-N-----------------------+ +-----------------------COMP_with:N-N----------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+ | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . COMP_with:N-N (performing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (performing,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +-----------------------------COMP_with:N-N----------------------------+ | +---------------MOD_ATT:N-N--------------+ +-----------------------COMP_with:N-N----------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (performing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (performing,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (assays,performing) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (set,SPXXX)
+-----------------------------COMP_with:N-N----------------------------+ +------------------------OBJ:V-N-----------------------+ +-----------------------COMP_with:N-N----------------------+ | | +---------------MOD_ATT:N-N--------------+ +------------OBJ:V-N------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +MOD_POST:N-+ | | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (performing,GENEXXX) OBJ:V-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_in:N-N (performing,vitro) COMP_with:N-N (performing,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------------COMP_with:N-N----------------------------+ +------------------------OBJ:V-N-----------------------+ +-----------------------COMP_with:N-N----------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+--------COMP_by:V-N--------+------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+ | +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (performing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (performing,GENEXXX) COMP_in:ADJ-N (transcription,vitro) COMP_by:V-N (tested,performing) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ | +---------------MOD_ATT:N-N--------------+ +------------------------------COMP_with:N-N-----------------------------+ | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (set,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------------COMP_with:N-N-----------------------------+ | +-------------------OBJ:V-N-------------------+ | | +------------------------OBJ:V-N-----------------------+ +------MOD_POST:N-ADJ-----+ | | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ | | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (hypothesis,vitro) SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,set) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------------COMP_with:N-N----------------------------+ +-----------------------COMP_with:N-N----------------------+ | +------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +MOD_POST:N-+ | | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (performing,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (assays,performing) COMP_in:N-N (performing,vitro) COMP_with:N-N (performing,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------------COMP_with:N-N-----------------------------+ | +-------------------OBJ:V-N-------------------+ | | +------------------------OBJ:V-N-----------------------+ +------MOD_POST:N-ADJ-----+ | | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ | | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (hypothesis,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,set) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------------COMP_with:N-N-----------------------------+ | +-------------------OBJ:V-N-------------------+ | | +------------------------OBJ:V-N-----------------------+ +------MOD_POST:N-ADJ-----+ | | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ | | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (hypothesis,vitro) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,set) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------------COMP_with:N-N----------------------------+ +-----------------------COMP_with:N-N----------------------+ | +------------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +MOD_POST:N-+ | +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (performing,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_in:N-N (performing,vitro) SUBJ:V-N (containing,SPXXX) COMP_with:N-N (performing,set) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------------COMP_with:N-N----------------------------+ +------------------------OBJ:V-N-----------------------+ | +----------SUBJ:V-N---------+-------------------OBJ:V-N-------------------+ | +-----------------------COMP_with:N-N----------------------+----COMP_of:N-N----+ | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) COMP_with:N-N (performing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) SUBJ:V-N (containing,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,promoter) COMP_with:N-N (performing,GENEXXX) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | +-------------------OBJ:V-N-------------------+ | +-------------------OBJ:V-N-------------------+ | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +MOD_POST:N-+ | +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) OBJ:V-N (containing,promoter) SUBJ:V-N (containing,SPXXX) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:N-N (performing,vitro) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | +---------------MOD_ATT:N-N--------------+ +-------------------OBJ:V-N-------------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ | +----COMP_of:N-N----+ | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) SUBJ:V-N (containing,hypothesis) COMP_of:N-N (GENEXXX,SPXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_in:N-N (performing,vitro) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ | +----------------------------------COMP_of:N-N---------------------------------+ | | +-----------------------------COMP_with:N-N----------------------------+ | | | +-----------------------COMP_with:N-N----------------------+ | | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +MOD_POST:N-+ | | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_of:N-N (performing,SPXXX) COMP_with:N-N (performing,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_in:N-N (performing,vitro) COMP_with:N-N (performing,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+------------------------OBJ:V-N-----------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ +-------------------OBJ:V-N-------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------------------OBJ:V-N-------------------+ +----COMP_of:N-N----+ | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) COMP_in:ADJ-N (transcription,vitro) COMP_of:N-N (GENEXXX,SPXXX) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | +------------------------------------COMP_with:N-N-----------------------------------+ | | +------------------------------COMP_with:N-N-----------------------------+ | | +------------------------OBJ:V-N-----------------------+ +-------------------OBJ:V-N-------------------+ | | | | +---------------MOD_ATT:N-N--------------+ +------MOD_POST:N-ADJ-----+ | | | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ | | | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (hypothesis,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,set) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (regions,GENEXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ | +----------------------------------COMP_of:N-N---------------------------------+ | | +-----------------------------COMP_with:N-N----------------------------+ | | | +-----------------------COMP_with:N-N----------------------+ | | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ | | | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_of:N-N (performing,SPXXX) COMP_with:N-N (performing,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (assays,performing) COMP_in:N-N (performing,vitro) COMP_with:N-N (performing,set) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | | +-----------------------------COMP_with:N-N----------------------------+ | | | +-----------------------COMP_with:N-N----------------------+ | | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ | | | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . MOD_POST:N-ADJ (performing,vitro) COMP_with:N-N (performing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (assays,performing) COMP_in:N-N (performing,vitro) COMP_with:N-N (performing,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (regions,GENEXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-----------------------COMP_with:N-N----------------------+ | | +---------------MOD_ATT:N-N--------------+ | +------------OBJ:V-N------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ +MOD_POST:N-+ | | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) OBJ:V-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_in:N-N (performing,vitro) COMP_with:N-N (performing,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-----------------------COMP_with:N-N----------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (performing,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) COMP_of:N-N (set,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +------------------------------------COMP_with:N-N-----------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | +---------------MOD_ATT:N-N--------------+ +-------------------OBJ:V-N-------------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ | | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_in:N-N (performing,vitro) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +---------------MOD_ATT:N-N--------------+ | +-------------------OBJ:V-N-------------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ | | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) OBJ:V-N (tested,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_in:N-N (performing,vitro) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+------------------------OBJ:V-N-----------------------+ +----------------------------------------------OBJ:V-N---------------------------------------------+ +-------------------OBJ:V-N-------------------+ | | +-----------------------COMP_with:N-N----------------------+ | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (performing,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) OBJ:V-N (assays,performing) OBJ:V-N (containing,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | | +-------------------OBJ:V-N-------------------+ | | +------------------------OBJ:V-N-----------------------+ | +------MOD_POST:N-ADJ-----+ | | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ | | +----SUBJ:V-N---+ | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (hypothesis,vitro) OBJ:V-N (tested,set) SUBJ:V-N (containing,set) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) COMP_in:N-N (hypothesis,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ | +------------------------------COMP_with:N-N-----------------------------+ | +------------------------OBJ:V-N-----------------------+ | +-------------------OBJ:V-N-------------------+ | | +-------------------OBJ:V-N-------------------+ | | +------MOD_POST:N-ADJ-----+ | | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ +-------COMP_in:N-N-------+ | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ | +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) MOD_POST:N-ADJ (hypothesis,vitro) OBJ:V-N (tested,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:N-N (hypothesis,GENEXXX) COMP_in:N-N (hypothesis,vitro) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (set,SPXXX)
+----------------------------------------------OBJ:V-N---------------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-----------------------COMP_with:N-N----------------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ +------------OBJ:V-N------------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (tested,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (performing,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (assays,performing) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+-------------------------------------COMP_by:N-N------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-----------------------COMP_with:N-N----------------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+SUBJ:V-+ | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (performing,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) OBJ:V-N (assays,performing) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+-------------------------------------COMP_by:N-N------------------------------------+ +------------------------OBJ:V-N-----------------------+ | +-----------------------COMP_with:N-N----------------------+ | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (performing,GENEXXX) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) OBJ:V-N (assays,performing) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX) MOD_ATT:N-N (promoter,GENEXXX)
+-------------------------------------COMP_by:N-N------------------------------------+ | +-----------------------COMP_with:N-N----------------------+ | +------------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ | | +----SUBJ:V-N---+ | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . SUBJ:V-N (containing,set) MOD_POST:N-ADJ (performing,vitro) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) MOD_ATT:N-N (regions,GENEXXX) OBJ:V-N (assays,performing) COMP_in:N-N (performing,vitro) COMP_with:N-N (performing,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +-----------------------COMP_with:N-N----------------------+ | | | +---------------MOD_ATT:N-N--------------+ | +------------OBJ:V-N------------+ | | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ | | | | | | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) OBJ:V-N (assays,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_with:N-N (performing,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) SUBJ:V-N (containing,SPXXX) COMP_in:N-N (performing,vitro) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (regions,GENEXXX)
+-----------------------------------------COMP_of:N-N----------------------------------------+ +-------------------------------------COMP_by:N-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +-----------------------COMP_with:N-N----------------------+ | | +-------------------OBJ:V-N-------------------+ | | +------------OBJ:V-N------------+ | | | | +----------MOD_ATT:N-N----------+ | +---SUBJ:V-N--+ | +MOD_POST:N-+ | | | | | | +-----MOD_ATT:N-N-----+ | | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ | +SUBJ:V-+ | | +MOD_ATT+ | | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (assays,performing) COMP_with:N-N (performing,GENEXXX) OBJ:V-N (containing,promoter) MOD:V-ADV (tested,directly) SUBJ:V-N (containing,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_in:N-N (performing,vitro) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (promoter,GENEXXX) COMP_of:N-N (hypothesis,SPXXX)
+----------------------------------------------SUBJ:V-N----------------------------------------------+ +-----------------------------------------COMP_of:N-N----------------------------------------+ | +-------------------------------------COMP_by:N-N------------------------------------+ | +------------------------OBJ:V-N-----------------------+ | +-----------------------COMP_with:N-N----------------------+ | | | +---------------MOD_ATT:N-N--------------+ +---SUBJ:V-N--+ | +------------OBJ:V-N------------+ | | | | | +----------MOD_ATT:N-N---------+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+ +COMP_in:A+-SUBJ:V-N+ +MOD_ATT:N-+ | | | | | +MOD_ATT+MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) SUBJ:V-N (tested,We) COMP_with:N-N (performing,GENEXXX) OBJ:V-N (assays,performing) COMP_in:ADJ-N (transcription,vitro) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_by:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (containing,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (hypothesis,SPXXX) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX)
+------------------------------------COMP_with:N-N-----------------------------------+ +------------------------OBJ:V-N-----------------------+ +------------------------------COMP_with:N-N-----------------------------+ | | +---------------MOD_ATT:N-N--------------+ +-------------------OBJ:V-N-------------------+ | | | | +----------MOD_ATT:N-N---------+ +---SUBJ:V-N--+ | +MOD_POST:N-+ | | +----SUBJ:V-N---+ | | +---MOD_ATT:N-N--+ | +MOD:V-A+---OBJ:V-N---+-COMP_by:N-N-+COMP_in:N-N+ +-SUBJ:V-N+ +MOD_ATT:N-+ +COMP_of+ | | | | +MOD_ATT:+ | | | | | | | | | | | | | | | | | | We directly tested this hypothesis by performing in vitro transcription assays with reconstituted GENEXXX and a set of SPXXX containing the GENEXXX , GENEXXX , and GENEXXX promoter regions . OBJ:V-N (assays,hypothesis) SUBJ:V-N (containing,set) OBJ:V-N (containing,regions) MOD_ATT:N-ADJ (GENEXXX,reconstituted) MOD_POST:N-ADJ (performing,vitro) SUBJ:V-N (tested,We) COMP_with:N-N (hypothesis,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) MOD:V-ADV (tested,directly) MOD_ATT:N-N (regions,promoter) COMP_in:N-N (performing,vitro) COMP_with:N-N (hypothesis,set) OBJ:V-N (tested,hypothesis) SUBJ:V-N (assays,transcription) COMP_by:N-N (hypothesis,performing) MOD_ATT:N-N (regions,GENEXXX) MOD_ATT:N-N (regions,GENEXXX) COMP_of:N-N (set,SPXXX)