PMID: 9287022-1 Sentence 0 SPXXX GENEXXX activates transcription from both GENEXXX and GENEXXX dependent promoters . Parse 0 +-------------------------COMP_from:V-N-------------------------+ +----SUBJ:V-N---+ +------MOD:ADJ-N-----+ | +MOD_AT+ +--OBJ:V-N--+ | +MOD:ADJ-+MOD_ATT:N+ | | | | | | | | SPXXX GENEXXX activates transcription from both GENEXXX and GENEXXX dependent promoters . MOD:ADJ-N (dependent,GENEXXX) COMP_from:V-N (activates,promoters) OBJ:V-N (activates,transcription) MOD_ATT:N-ADJ (promoters,dependent) MOD:ADJ-N (dependent,GENEXXX) MOD_ATT:N-N (GENEXXX,SPXXX) SUBJ:V-N (activates,SPXXX) Parse 1 +-------------------------COMP_from:V-N-------------------------+ | +------MOD:ADJ-N-----+ | +MOD_AT+SUBJ:V-N+--OBJ:V-N--+ | +MOD:ADJ-+MOD_ATT:N+ | | | | | | | | SPXXX GENEXXX activates transcription from both GENEXXX and GENEXXX dependent promoters . MOD:ADJ-N (dependent,GENEXXX) COMP_from:V-N (activates,promoters) OBJ:V-N (activates,transcription) SUBJ:V-N (activates,GENEXXX) MOD_ATT:N-ADJ (promoters,dependent) MOD:ADJ-N (dependent,GENEXXX) MOD_ATT:N-N (GENEXXX,SPXXX) Parse 2 +-------------------------COMP_from:V-N-------------------------+ +----SUBJ:V-N---+----------COMP_from:V-N---------+ | +MOD_AT+ +--OBJ:V-N--+ | +MOD:ADJ-+MOD_ATT:N+ | | | | | | | | SPXXX GENEXXX activates transcription from both GENEXXX and GENEXXX dependent promoters . COMP_from:V-N (activates,promoters) OBJ:V-N (activates,transcription) MOD_ATT:N-ADJ (promoters,dependent) MOD:ADJ-N (dependent,GENEXXX) MOD_ATT:N-N (GENEXXX,SPXXX) SUBJ:V-N (activates,SPXXX) COMP_from:V-N (activates,GENEXXX) Parse 3 +-------------------------COMP_from:V-N-------------------------+ +----------COMP_from:V-N---------+ | +MOD_AT+SUBJ:V-N+--OBJ:V-N--+ | +MOD:ADJ-+MOD_ATT:N+ | | | | | | | | SPXXX GENEXXX activates transcription from both GENEXXX and GENEXXX dependent promoters . COMP_from:V-N (activates,promoters) OBJ:V-N (activates,transcription) SUBJ:V-N (activates,GENEXXX) MOD_ATT:N-ADJ (promoters,dependent) MOD:ADJ-N (dependent,GENEXXX) MOD_ATT:N-N (GENEXXX,SPXXX) COMP_from:V-N (activates,GENEXXX) Parse 4 +-------------------COMP_from:N-N-------------------+ +----SUBJ:V-N---+ | +------MOD:ADJ-N-----+ | +MOD_AT+ +--OBJ:V-N--+ | +MOD:ADJ-+MOD_ATT:N+ | | | | | | | | SPXXX GENEXXX activates transcription from both GENEXXX and GENEXXX dependent promoters . MOD:ADJ-N (dependent,GENEXXX) COMP_from:N-N (transcription,promoters) OBJ:V-N (activates,transcription) MOD_ATT:N-ADJ (promoters,dependent) MOD:ADJ-N (dependent,GENEXXX) MOD_ATT:N-N (GENEXXX,SPXXX) SUBJ:V-N (activates,SPXXX) Parse 5 +-------------------COMP_from:N-N-------------------+ | +------MOD:ADJ-N-----+ | +MOD_AT+SUBJ:V-N+--OBJ:V-N--+ | +MOD:ADJ-+MOD_ATT:N+ | | | | | | | | SPXXX GENEXXX activates transcription from both GENEXXX and GENEXXX dependent promoters . MOD:ADJ-N (dependent,GENEXXX) COMP_from:N-N (transcription,promoters) OBJ:V-N (activates,transcription) SUBJ:V-N (activates,GENEXXX) MOD_ATT:N-ADJ (promoters,dependent) MOD:ADJ-N (dependent,GENEXXX) MOD_ATT:N-N (GENEXXX,SPXXX) Parse 6 +----SUBJ:V-N---+ +-------------------COMP_from:N-N-------------------+ +MOD_AT+ +--OBJ:V-N--+----COMP_from:N-N---+ +MOD:ADJ-+MOD_ATT:N+ | | | | | | | | SPXXX GENEXXX activates transcription from both GENEXXX and GENEXXX dependent promoters . COMP_from:N-N (transcription,promoters) COMP_from:N-N (transcription,GENEXXX) OBJ:V-N (activates,transcription) MOD_ATT:N-ADJ (promoters,dependent) MOD:ADJ-N (dependent,GENEXXX) MOD_ATT:N-N (GENEXXX,SPXXX) SUBJ:V-N (activates,SPXXX) Parse 7 +-------------------COMP_from:N-N-------------------+ +MOD_AT+SUBJ:V-N+--OBJ:V-N--+----COMP_from:N-N---+ +MOD:ADJ-+MOD_ATT:N+ | | | | | | | | SPXXX GENEXXX activates transcription from both GENEXXX and GENEXXX dependent promoters . COMP_from:N-N (transcription,promoters) COMP_from:N-N (transcription,GENEXXX) OBJ:V-N (activates,transcription) SUBJ:V-N (activates,GENEXXX) MOD_ATT:N-ADJ (promoters,dependent) MOD:ADJ-N (dependent,GENEXXX) MOD_ATT:N-N (GENEXXX,SPXXX) Parse 8 +-------------------------COMP_from:V-N-------------------------+ | +----------MOD_ATT:N-N---------+ +----SUBJ:V-N---+ | +----MOD_ATT:N-N---+ +MOD_AT+ +--OBJ:V-N--+ | | +MOD_ATT:N+ | | | | | | | | SPXXX GENEXXX activates transcription from both GENEXXX and GENEXXX dependent promoters . MOD_ATT:N-N (promoters,GENEXXX) COMP_from:V-N (activates,promoters) OBJ:V-N (activates,transcription) MOD_ATT:N-ADJ (promoters,dependent) MOD_ATT:N-N (GENEXXX,SPXXX) SUBJ:V-N (activates,SPXXX) MOD_ATT:N-N (promoters,GENEXXX) Parse 9 +-------------------------COMP_from:V-N-------------------------+ | +----------MOD_ATT:N-N---------+ | | +----MOD_ATT:N-N---+ +MOD_AT+SUBJ:V-N+--OBJ:V-N--+ | | +MOD_ATT:N+ | | | | | | | | SPXXX GENEXXX activates transcription from both GENEXXX and GENEXXX dependent promoters . MOD_ATT:N-N (promoters,GENEXXX) COMP_from:V-N (activates,promoters) OBJ:V-N (activates,transcription) SUBJ:V-N (activates,GENEXXX) MOD_ATT:N-ADJ (promoters,dependent) MOD_ATT:N-N (GENEXXX,SPXXX) MOD_ATT:N-N (promoters,GENEXXX) Parse 10 +-------------------------COMP_from:V-N-------------------------+ +----SUBJ:V-N---+----------COMP_from:V-N---------+ +----MOD_ATT:N-N---+ +MOD_AT+ +--OBJ:V-N--+ | | +MOD_ATT:N+ | | | | | | | | SPXXX GENEXXX activates transcription from both GENEXXX and GENEXXX dependent promoters . COMP_from:V-N (activates,promoters) OBJ:V-N (activates,transcription) MOD_ATT:N-ADJ (promoters,dependent) MOD_ATT:N-N (GENEXXX,SPXXX) SUBJ:V-N (activates,SPXXX) MOD_ATT:N-N (promoters,GENEXXX) COMP_from:V-N (activates,GENEXXX) Parse 11 +-------------------------COMP_from:V-N-------------------------+ +----------COMP_from:V-N---------+ +----MOD_ATT:N-N---+ +MOD_AT+SUBJ:V-N+--OBJ:V-N--+ | | +MOD_ATT:N+ | | | | | | | | SPXXX GENEXXX activates transcription from both GENEXXX and GENEXXX dependent promoters . COMP_from:V-N (activates,promoters) OBJ:V-N (activates,transcription) SUBJ:V-N (activates,GENEXXX) MOD_ATT:N-ADJ (promoters,dependent) MOD_ATT:N-N (GENEXXX,SPXXX) MOD_ATT:N-N (promoters,GENEXXX) COMP_from:V-N (activates,GENEXXX) Parse 12 +-------------------COMP_from:N-N-------------------+ | +----------MOD_ATT:N-N---------+ +----SUBJ:V-N---+ | | +----MOD_ATT:N-N---+ +MOD_AT+ +--OBJ:V-N--+ | | +MOD_ATT:N+ | | | | | | | | SPXXX GENEXXX activates transcription from both GENEXXX and GENEXXX dependent promoters . COMP_from:N-N (transcription,promoters) MOD_ATT:N-N (promoters,GENEXXX) OBJ:V-N (activates,transcription) MOD_ATT:N-ADJ (promoters,dependent) MOD_ATT:N-N (GENEXXX,SPXXX) SUBJ:V-N (activates,SPXXX) MOD_ATT:N-N (promoters,GENEXXX) Parse 13 +-------------------COMP_from:N-N-------------------+ | +----------MOD_ATT:N-N---------+ | | +----MOD_ATT:N-N---+ +MOD_AT+SUBJ:V-N+--OBJ:V-N--+ | | +MOD_ATT:N+ | | | | | | | | SPXXX GENEXXX activates transcription from both GENEXXX and GENEXXX dependent promoters . COMP_from:N-N (transcription,promoters) MOD_ATT:N-N (promoters,GENEXXX) OBJ:V-N (activates,transcription) SUBJ:V-N (activates,GENEXXX) MOD_ATT:N-ADJ (promoters,dependent) MOD_ATT:N-N (GENEXXX,SPXXX) MOD_ATT:N-N (promoters,GENEXXX) Parse 14 +-------------------COMP_from:N-N-------------------+ +----SUBJ:V-N---+ | +----MOD_ATT:N-N---+ +MOD_AT+ +--OBJ:V-N--+----COMP_from:N-N---+ | +MOD_ATT:N+ | | | | | | | | SPXXX GENEXXX activates transcription from both GENEXXX and GENEXXX dependent promoters . COMP_from:N-N (transcription,promoters) COMP_from:N-N (transcription,GENEXXX) OBJ:V-N (activates,transcription) MOD_ATT:N-ADJ (promoters,dependent) MOD_ATT:N-N (GENEXXX,SPXXX) SUBJ:V-N (activates,SPXXX) MOD_ATT:N-N (promoters,GENEXXX) Parse 15 +-------------------COMP_from:N-N-------------------+ | +----MOD_ATT:N-N---+ +MOD_AT+SUBJ:V-N+--OBJ:V-N--+----COMP_from:N-N---+ | +MOD_ATT:N+ | | | | | | | | SPXXX GENEXXX activates transcription from both GENEXXX and GENEXXX dependent promoters . COMP_from:N-N (transcription,promoters) COMP_from:N-N (transcription,GENEXXX) OBJ:V-N (activates,transcription) SUBJ:V-N (activates,GENEXXX) MOD_ATT:N-ADJ (promoters,dependent) MOD_ATT:N-N (GENEXXX,SPXXX) MOD_ATT:N-N (promoters,GENEXXX) PMID: 9733708-7 Sentence 1 SPXXX result and others indicate that different surfaces of GENEXXX probably interact with GENEXXX and GENEXXX RNA polymerases . Parse 0 +-------------COMP_with:V-N-------------+ +-----SUBJ:V-N-----+ +----------SUBJ:V-N----------+ +---MOD_ATT:N-N---+ | +MOD_A+ +SUBJ:V-+ +COMP_of:N-N+ +MOD:V-AD+ | +MOD_A+MOD_ATT+ | | | | | | | | | | | | SPXXX result and others indicate that different surfaces of GENEXXX probably interact with GENEXXX and GENEXXX RNA polymerases . SUBJ:V-N (interact,surfaces) MOD:V-ADV (interact,probably) MOD_ATT:N-N (result,SPXXX) COMP_with:V-N (interact,polymerases) SUBJ:V-N (indicate,result) SUBJ:V-N (indicate,others) COMP_of:N-N (surfaces,GENEXXX) MOD_ATT:N-N (RNA,GENEXXX) MOD_ATT:N-N (polymerases,RNA) MOD_ATT:N-N (RNA,GENEXXX) Parse 1 +-------------COMP_with:V-N-------------+ +-----SUBJ:V-N-----+ +----------SUBJ:V-N----------+ +---MOD_ATT:N-N---+ | +MOD_A+ +SUBJ:V-+ +MOD:ADJ+ +COMP_of:N-N+ +MOD:V-AD+ | +MOD_A+MOD_ATT+ | | | | | | | | | | | | | | SPXXX result and others indicate that different surfaces of GENEXXX probably interact with GENEXXX and GENEXXX RNA polymerases . SUBJ:V-N (interact,surfaces) MOD_ATT:N-N (result,SPXXX) MOD:ADJ-ADV (different,that) SUBJ:V-N (indicate,result) COMP_of:N-N (surfaces,GENEXXX) SUBJ:V-N (indicate,others) MOD_ATT:N-N (RNA,GENEXXX) MOD_ATT:N-N (RNA,GENEXXX) MOD_ATT:N-N (polymerases,RNA) MOD:V-ADV (interact,probably) COMP_with:V-N (interact,polymerases) Parse 2 +-------------COMP_with:V-N-------------+ | +-------MOD_ATT:N-N-------+ +-----SUBJ:V-N-----+ +----------SUBJ:V-N----------+ | +-MOD_ATT:N-N-+ +MOD_A+ +SUBJ:V-+ +COMP_of:N-N+ +MOD:V-AD+ | | +MOD_ATT+ | | | | | | | | | | | | SPXXX result and others indicate that different surfaces of GENEXXX probably interact with GENEXXX and GENEXXX RNA polymerases . SUBJ:V-N (interact,surfaces) MOD:V-ADV (interact,probably) MOD_ATT:N-N (result,SPXXX) COMP_with:V-N (interact,polymerases) SUBJ:V-N (indicate,result) COMP_of:N-N (surfaces,GENEXXX) SUBJ:V-N (indicate,others) MOD_ATT:N-N (polymerases,GENEXXX) MOD_ATT:N-N (polymerases,RNA) MOD_ATT:N-N (polymerases,GENEXXX) Parse 3 +-------------COMP_with:V-N-------------+ | +-------MOD_ATT:N-N-------+ +-----SUBJ:V-N-----+ +----------SUBJ:V-N----------+ | +-MOD_ATT:N-N-+ +MOD_A+ +SUBJ:V-+ +MOD:ADJ+ +COMP_of:N-N+ +MOD:V-AD+ | | +MOD_ATT+ | | | | | | | | | | | | | | SPXXX result and others indicate that different surfaces of GENEXXX probably interact with GENEXXX and GENEXXX RNA polymerases . SUBJ:V-N (interact,surfaces) MOD_ATT:N-N (polymerases,GENEXXX) MOD_ATT:N-N (result,SPXXX) MOD:ADJ-ADV (different,that) SUBJ:V-N (indicate,result) COMP_of:N-N (surfaces,GENEXXX) SUBJ:V-N (indicate,others) MOD_ATT:N-N (polymerases,RNA) MOD_ATT:N-N (polymerases,GENEXXX) MOD:V-ADV (interact,probably) COMP_with:V-N (interact,polymerases) Parse 4 +-------------COMP_with:V-N-------------+ +-----SUBJ:V-N-----+ +----------SUBJ:V-N----------+ +-------MOD_ATT:N-N-------+ +MOD_A+ +SUBJ:V-+ +COMP_of:N-N+ +MOD:V-AD+ | +MOD_A+MOD_ATT+ | | | | | | | | | | | | SPXXX result and others indicate that different surfaces of GENEXXX probably interact with GENEXXX and GENEXXX RNA polymerases . SUBJ:V-N (interact,surfaces) MOD:V-ADV (interact,probably) MOD_ATT:N-N (polymerases,GENEXXX) MOD_ATT:N-N (result,SPXXX) COMP_with:V-N (interact,polymerases) SUBJ:V-N (indicate,result) COMP_of:N-N (surfaces,GENEXXX) SUBJ:V-N (indicate,others) MOD_ATT:N-N (RNA,GENEXXX) MOD_ATT:N-N (polymerases,RNA) Parse 5 +-------------COMP_with:V-N-------------+ +-----SUBJ:V-N-----+ +----------SUBJ:V-N----------+ +-------MOD_ATT:N-N-------+ +MOD_A+ +SUBJ:V-+ +MOD:ADJ+ +COMP_of:N-N+ +MOD:V-AD+ | +MOD_A+MOD_ATT+ | | | | | | | | | | | | | | SPXXX result and others indicate that different surfaces of GENEXXX probably interact with GENEXXX and GENEXXX RNA polymerases . SUBJ:V-N (interact,surfaces) MOD_ATT:N-N (polymerases,GENEXXX) MOD_ATT:N-N (result,SPXXX) MOD:ADJ-ADV (different,that) SUBJ:V-N (indicate,result) COMP_of:N-N (surfaces,GENEXXX) SUBJ:V-N (indicate,others) MOD_ATT:N-N (RNA,GENEXXX) MOD_ATT:N-N (polymerases,RNA) MOD:V-ADV (interact,probably) COMP_with:V-N (interact,polymerases) Parse 6 +-----SUBJ:V-N-----+ +----------SUBJ:V-N----------+-------------COMP_with:V-N-------------+ +MOD_A+ +SUBJ:V-+ +COMP_of:N-N+ +MOD:V-AD+COMP_with:V-N+ +MOD_A+MOD_ATT+ | | | | | | | | | | | | SPXXX result and others indicate that different surfaces of GENEXXX probably interact with GENEXXX and GENEXXX RNA polymerases . SUBJ:V-N (interact,surfaces) COMP_with:V-N (interact,GENEXXX) MOD:V-ADV (interact,probably) MOD_ATT:N-N (result,SPXXX) SUBJ:V-N (indicate,result) COMP_of:N-N (surfaces,GENEXXX) SUBJ:V-N (indicate,others) MOD_ATT:N-N (RNA,GENEXXX) MOD_ATT:N-N (polymerases,RNA) COMP_with:V-N (interact,polymerases) Parse 7 +-----SUBJ:V-N-----+ +----------SUBJ:V-N----------+-------------COMP_with:V-N-------------+ +MOD_A+ +SUBJ:V-+ +MOD:ADJ+ +COMP_of:N-N+ +MOD:V-AD+COMP_with:V-N+ +MOD_A+MOD_ATT+ | | | | | | | | | | | | | | SPXXX result and others indicate that different surfaces of GENEXXX probably interact with GENEXXX and GENEXXX RNA polymerases . SUBJ:V-N (interact,surfaces) COMP_with:V-N (interact,GENEXXX) MOD_ATT:N-N (result,SPXXX) MOD:ADJ-ADV (different,that) SUBJ:V-N (indicate,result) COMP_of:N-N (surfaces,GENEXXX) SUBJ:V-N (indicate,others) MOD_ATT:N-N (RNA,GENEXXX) MOD_ATT:N-N (polymerases,RNA) MOD:V-ADV (interact,probably) COMP_with:V-N (interact,polymerases) Parse 8 +-------------COMP_with:V-N-------------+ +-----SUBJ:V-N-----+ +----------SUBJ:V-N----------+ +-MOD_ATT:N-N-+ +MOD_A+ +SUBJ:V-+ +COMP_of:N-N+ +MOD:V-AD+COMP_with:V-N+ | +MOD_ATT+ | | | | | | | | | | | | SPXXX result and others indicate that different surfaces of GENEXXX probably interact with GENEXXX and GENEXXX RNA polymerases . SUBJ:V-N (interact,surfaces) COMP_with:V-N (interact,GENEXXX) MOD:V-ADV (interact,probably) MOD_ATT:N-N (result,SPXXX) SUBJ:V-N (indicate,result) COMP_of:N-N (surfaces,GENEXXX) SUBJ:V-N (indicate,others) MOD_ATT:N-N (polymerases,RNA) MOD_ATT:N-N (polymerases,GENEXXX) COMP_with:V-N (interact,polymerases) Parse 9 +-------------COMP_with:V-N-------------+ +-----SUBJ:V-N-----+ +----------SUBJ:V-N----------+ +-MOD_ATT:N-N-+ +MOD_A+ +SUBJ:V-+ +MOD:ADJ+ +COMP_of:N-N+ +MOD:V-AD+COMP_with:V-N+ | +MOD_ATT+ | | | | | | | | | | | | | | SPXXX result and others indicate that different surfaces of GENEXXX probably interact with GENEXXX and GENEXXX RNA polymerases . SUBJ:V-N (interact,surfaces) COMP_with:V-N (interact,GENEXXX) MOD_ATT:N-N (result,SPXXX) MOD:ADJ-ADV (different,that) SUBJ:V-N (indicate,result) COMP_of:N-N (surfaces,GENEXXX) SUBJ:V-N (indicate,others) MOD_ATT:N-N (polymerases,RNA) MOD_ATT:N-N (polymerases,GENEXXX) MOD:V-ADV (interact,probably) COMP_with:V-N (interact,polymerases) Parse 10 +-------------OBJ:V-N------------+ +-----SUBJ:V-N-----+ +----------SUBJ:V-N----------+------COMP_with:V-N------+ | +MOD_A+ +SUBJ:V-+ +COMP_of:N-N+ +MOD:V-AD+COMP_with:V-N+ | +MOD_ATT+ | | | | | | | | | | | | | SPXXX result and others indicate that different surfaces of GENEXXX probably interact with GENEXXX and GENEXXX RNA polymerases . SUBJ:V-N (interact,surfaces) OBJ:V-N (with,polymerases) COMP_with:V-N (interact,GENEXXX) MOD:V-ADV (interact,probably) MOD_ATT:N-N (result,SPXXX) COMP_with:V-N (interact,GENEXXX) SUBJ:V-N (indicate,result) COMP_of:N-N (surfaces,GENEXXX) SUBJ:V-N (indicate,others) MOD_ATT:N-N (polymerases,RNA) Parse 11 +-------------OBJ:V-N------------+ +-----SUBJ:V-N-----+ +----------SUBJ:V-N----------+------COMP_with:V-N------+ | +MOD_A+ +SUBJ:V-+ +MOD:ADJ+ +COMP_of:N-N+ +MOD:V-AD+COMP_with:V-N+ | +MOD_ATT+ | | | | | | | | | | | | | | | SPXXX result and others indicate that different surfaces of GENEXXX probably interact with GENEXXX and GENEXXX RNA polymerases . COMP_with:V-N (interact,GENEXXX) SUBJ:V-N (interact,surfaces) OBJ:V-N (with,polymerases) COMP_with:V-N (interact,GENEXXX) MOD_ATT:N-N (result,SPXXX) MOD:ADJ-ADV (different,that) SUBJ:V-N (indicate,result) COMP_of:N-N (surfaces,GENEXXX) SUBJ:V-N (indicate,others) MOD_ATT:N-N (polymerases,RNA) MOD:V-ADV (interact,probably) Parse 12 +-------------OBJ:V-N------------+ +---------COMP_with:V-N---------+ | +-----SUBJ:V-N-----+ +----------SUBJ:V-N----------+ | +---MOD_ATT:N-N---+ | +MOD_A+ +SUBJ:V-+ +COMP_of:N-N+ +MOD:V-AD+ | | +MOD_A+ | | | | | | | | | | | | | | SPXXX result and others indicate that different surfaces of GENEXXX probably interact with GENEXXX and GENEXXX RNA polymerases . SUBJ:V-N (interact,surfaces) MOD:V-ADV (interact,probably) MOD_ATT:N-N (result,SPXXX) SUBJ:V-N (indicate,result) COMP_of:N-N (surfaces,GENEXXX) SUBJ:V-N (indicate,others) MOD_ATT:N-N (RNA,GENEXXX) COMP_with:V-N (interact,RNA) OBJ:V-N (with,polymerases) MOD_ATT:N-N (RNA,GENEXXX) Parse 13 +-------------OBJ:V-N------------+ +---------COMP_with:V-N---------+ | +-----SUBJ:V-N-----+ +----------SUBJ:V-N----------+ | +---MOD_ATT:N-N---+ | +MOD_A+ +SUBJ:V-+ +MOD:ADJ+ +COMP_of:N-N+ +MOD:V-AD+ | | +MOD_A+ | | | | | | | | | | | | | | | | SPXXX result and others indicate that different surfaces of GENEXXX probably interact with GENEXXX and GENEXXX RNA polymerases . SUBJ:V-N (interact,surfaces) OBJ:V-N (with,polymerases) MOD_ATT:N-N (result,SPXXX) MOD:ADJ-ADV (different,that) SUBJ:V-N (indicate,result) COMP_of:N-N (surfaces,GENEXXX) SUBJ:V-N (indicate,others) MOD_ATT:N-N (RNA,GENEXXX) COMP_with:V-N (interact,RNA) MOD_ATT:N-N (RNA,GENEXXX) MOD:V-ADV (interact,probably) Parse 14 +-------------OBJ:V-N------------+ +-----SUBJ:V-N-----+ +----------SUBJ:V-N----------+---------COMP_with:V-N---------+ | +MOD_A+ +SUBJ:V-+ +COMP_of:N-N+ +MOD:V-AD+COMP_with:V-N+ +MOD_A+ | | | | | | | | | | | | | | SPXXX result and others indicate that different surfaces of GENEXXX probably interact with GENEXXX and GENEXXX RNA polymerases . SUBJ:V-N (interact,surfaces) OBJ:V-N (with,polymerases) COMP_with:V-N (interact,GENEXXX) MOD:V-ADV (interact,probably) MOD_ATT:N-N (result,SPXXX) SUBJ:V-N (indicate,result) COMP_of:N-N (surfaces,GENEXXX) SUBJ:V-N (indicate,others) COMP_with:V-N (interact,RNA) MOD_ATT:N-N (RNA,GENEXXX) Parse 15 +-------------OBJ:V-N------------+ +-----SUBJ:V-N-----+ +----------SUBJ:V-N----------+---------COMP_with:V-N---------+ | +MOD_A+ +SUBJ:V-+ +MOD:ADJ+ +COMP_of:N-N+ +MOD:V-AD+COMP_with:V-N+ +MOD_A+ | | | | | | | | | | | | | | | | SPXXX result and others indicate that different surfaces of GENEXXX probably interact with GENEXXX and GENEXXX RNA polymerases . SUBJ:V-N (interact,surfaces) OBJ:V-N (with,polymerases) COMP_with:V-N (interact,RNA) COMP_with:V-N (interact,GENEXXX) MOD_ATT:N-N (result,SPXXX) MOD:ADJ-ADV (different,that) SUBJ:V-N (indicate,result) COMP_of:N-N (surfaces,GENEXXX) SUBJ:V-N (indicate,others) MOD_ATT:N-N (RNA,GENEXXX) MOD:V-ADV (interact,probably) PMID: 9748255-5 Sentence 2 Both GENEXXX and GENEXXX stimulated transcription from the GENEXXX promoter 10-fold more efficiently than GENEXXX . Parse 0 +--------------------------------MOD:V-ADV-------------------------------+ +----------------------------MOD:V-ADV---------------------------+ | +------SUBJ:V-N------+--------------COMP_from:V-N-------------+ | | | +SUBJ:V-N+---OBJ:V-N--+ +MOD_ATT+ | +OBJ:V-+ | | | | | | | | | Both GENEXXX and GENEXXX stimulated transcription from the GENEXXX promoter 10-fold more efficiently than GENEXXX . MOD:V-ADV (stimulated,than) OBJ:V-N (stimulated,transcription) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (stimulated,GENEXXX) MOD:V-ADV (stimulated,efficiently) SUBJ:V-N (stimulated,GENEXXX) OBJ:V-N (than,GENEXXX) COMP_from:V-N (stimulated,promoter) Parse 1 +--------------------------------MOD:V-ADV-------------------------------+ +----------------------------MOD:V-ADV---------------------------+ | +--------------------MOD:V-ADV--------------------+ | | +------SUBJ:V-N------+--------------COMP_from:V-N-------------+ | | | | +SUBJ:V-N+---OBJ:V-N--+ +MOD_ATT+ | | +OBJ:V-+ | | | | | | | | | | Both GENEXXX and GENEXXX stimulated transcription from the GENEXXX promoter 10-fold more efficiently than GENEXXX . OBJ:V-N (stimulated,transcription) MOD:V-ADV (stimulated,than) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (stimulated,10-fold) SUBJ:V-N (stimulated,GENEXXX) MOD:V-ADV (stimulated,efficiently) SUBJ:V-N (stimulated,GENEXXX) OBJ:V-N (than,GENEXXX) COMP_from:V-N (stimulated,promoter) Parse 2 +--------------------------------MOD:V-ADV-------------------------------+ +----------------------------MOD:V-ADV---------------------------+ | +------SUBJ:V-N------+ +-------COMP_from:N-N-------+ | | | +SUBJ:V-N+---OBJ:V-N--+ +MOD_ATT+ | +OBJ:V-+ | | | | | | | | | Both GENEXXX and GENEXXX stimulated transcription from the GENEXXX promoter 10-fold more efficiently than GENEXXX . MOD:V-ADV (stimulated,than) OBJ:V-N (stimulated,transcription) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (stimulated,GENEXXX) MOD:V-ADV (stimulated,efficiently) SUBJ:V-N (stimulated,GENEXXX) OBJ:V-N (than,GENEXXX) COMP_from:N-N (transcription,promoter) Parse 3 +--------------------------------MOD:V-ADV-------------------------------+ +----------------------------MOD:V-ADV---------------------------+ | +--------------------MOD:V-ADV--------------------+ | | +------SUBJ:V-N------+ +-------COMP_from:N-N-------+ | | | | +SUBJ:V-N+---OBJ:V-N--+ +MOD_ATT+ | | +OBJ:V-+ | | | | | | | | | | Both GENEXXX and GENEXXX stimulated transcription from the GENEXXX promoter 10-fold more efficiently than GENEXXX . MOD:V-ADV (stimulated,than) OBJ:V-N (stimulated,transcription) COMP_from:N-N (transcription,promoter) MOD_ATT:N-N (promoter,GENEXXX) MOD:V-ADV (stimulated,10-fold) SUBJ:V-N (stimulated,GENEXXX) MOD:V-ADV (stimulated,efficiently) SUBJ:V-N (stimulated,GENEXXX) OBJ:V-N (than,GENEXXX) Parse 4 +--------------------------------MOD:V-ADV-------------------------------+ +----------------------------MOD:V-ADV---------------------------+ | +-----------------------MOD:V-ADV-----------------------+ | | +------SUBJ:V-N------+--------------COMP_from:V-N-------------+ | | | | +SUBJ:V-N+---OBJ:V-N--+ +MOD_ATT+ | | +OBJ:V-+ | | | | | | | | | | Both GENEXXX and GENEXXX stimulated transcription from the GENEXXX promoter 10-fold more efficiently than GENEXXX . MOD:V-ADV (stimulated,more) OBJ:V-N (stimulated,transcription) MOD:V-ADV (stimulated,than) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (stimulated,GENEXXX) MOD:V-ADV (stimulated,efficiently) SUBJ:V-N (stimulated,GENEXXX) OBJ:V-N (than,GENEXXX) COMP_from:V-N (stimulated,promoter) Parse 5 +--------------------------------MOD:V-ADV-------------------------------+ +----------------------------MOD:V-ADV---------------------------+ | +-----------------------MOD:V-ADV-----------------------+ | | +--------------------MOD:V-ADV--------------------+ | | | +------SUBJ:V-N------+--------------COMP_from:V-N-------------+ | | | | | +SUBJ:V-N+---OBJ:V-N--+ +MOD_ATT+ | | | +OBJ:V-+ | | | | | | | | | | | Both GENEXXX and GENEXXX stimulated transcription from the GENEXXX promoter 10-fold more efficiently than GENEXXX . MOD:V-ADV (stimulated,more) OBJ:V-N (stimulated,transcription) MOD:V-ADV (stimulated,10-fold) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (stimulated,GENEXXX) MOD:V-ADV (stimulated,efficiently) SUBJ:V-N (stimulated,GENEXXX) OBJ:V-N (than,GENEXXX) MOD:V-ADV (stimulated,than) COMP_from:V-N (stimulated,promoter) Parse 6 +--------------------------------MOD:V-ADV-------------------------------+ +----------------------------MOD:V-ADV---------------------------+ | +-----------------------MOD:V-ADV-----------------------+ | | +------SUBJ:V-N------+ +-------COMP_from:N-N-------+ | | | | +SUBJ:V-N+---OBJ:V-N--+ +MOD_ATT+ | | +OBJ:V-+ | | | | | | | | | | Both GENEXXX and GENEXXX stimulated transcription from the GENEXXX promoter 10-fold more efficiently than GENEXXX . MOD:V-ADV (stimulated,than) MOD:V-ADV (stimulated,more) OBJ:V-N (stimulated,transcription) COMP_from:N-N (transcription,promoter) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (stimulated,GENEXXX) MOD:V-ADV (stimulated,efficiently) SUBJ:V-N (stimulated,GENEXXX) OBJ:V-N (than,GENEXXX) Parse 7 +--------------------------------MOD:V-ADV-------------------------------+ +----------------------------MOD:V-ADV---------------------------+ | +-----------------------MOD:V-ADV-----------------------+ | | +--------------------MOD:V-ADV--------------------+ | | | +------SUBJ:V-N------+ +-------COMP_from:N-N-------+ | | | | | +SUBJ:V-N+---OBJ:V-N--+ +MOD_ATT+ | | | +OBJ:V-+ | | | | | | | | | | | Both GENEXXX and GENEXXX stimulated transcription from the GENEXXX promoter 10-fold more efficiently than GENEXXX . MOD:V-ADV (stimulated,more) OBJ:V-N (stimulated,transcription) MOD:V-ADV (stimulated,than) MOD:V-ADV (stimulated,10-fold) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (stimulated,GENEXXX) MOD:V-ADV (stimulated,efficiently) SUBJ:V-N (stimulated,GENEXXX) OBJ:V-N (than,GENEXXX) COMP_from:N-N (transcription,promoter) PMID: 9658001-2 Sentence 3 One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . Parse 0 +---------------------------SUBJ:V_PASS-N---------------------------+ +-------COMP_with:V_PASS-N------+ +-----------COMP_with:V_PASS-N-----------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,factor) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 1 +---------------------------SUBJ:V_PASS-N---------------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 2 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +-------COMP_with:V_PASS-N------+ +--------------------------COMP_with:V_PASS-N-------------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 3 +----------------------------APPOS----------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ | +-----------COMP_with:V_PASS-N-----------+ | | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 4 +---------------------------SUBJ:V_PASS-N---------------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 5 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 6 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 7 +---------------------------SUBJ:V_PASS-N---------------------------+ +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ +---------------------COMP_with:V_PASS-N---------------------+ | +-----------COMP_with:V_PASS-N-----------+ | +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) Parse 8 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 9 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +-------COMP_with:V_PASS-N------+ +--------------COMP_with:V-N-------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V-N (associated,factor) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 10 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +-------COMP_with:V_PASS-N------+ +-----------COMP_with:V_PASS-N-----------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,factor) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 11 +------------------------APPOS-----------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +-------COMP_with:V_PASS-N------+ | | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V-N (associated,factor) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) Parse 12 +---------------------------SUBJ:V_PASS-N---------------------------+ +-------COMP_with:V_PASS-N------+ +--------------------------COMP_with:V_PASS-N-------------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 13 +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ +-----------COMP_with:V_PASS-N-----------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,factor) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) Parse 14 +---------------------------SUBJ:V_PASS-N---------------------------+ +----------------------------APPOS----------------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 15 +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,factor) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 16 +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ +-------------------COMP_with:N-N-------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) Parse 17 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,factor) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) Parse 18 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +---------------------COMP_with:V_PASS-N---------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,factor) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 19 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +-----------COMP_with:V_PASS-N-----------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 20 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +------------------------APPOS-----------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,factor) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 21 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) MOD_ATT:N-N (sigma,early-sporulation) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 22 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +---------COMP_with:V-N---------+ +----------------------------APPOS----------------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V-N (includes,class) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 23 +----------------------------APPOS----------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +-------COMP_with:V_PASS-N------+ +-------------------COMP_with:N-N-------------------+ | +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 24 +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,class) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 25 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------------COMP_with:V_PASS-N---------------------+ +-----------COMP_with:V_PASS-N-----------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) COMP_with:V_PASS-N (recognized,factor) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 26 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +---------------------COMP_with:V_PASS-N---------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,class) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) Parse 27 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +------------------------APPOS-----------------------+ +--------OBJ:V-N--------+ | | | +-------COMP_with:V_PASS-N------+ | | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 28 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +------------------SUBJ:V-N------------------+ | | +-------COMP_with:V_PASS-N------+ | +--------------------------COMP_with:V_PASS-N-------------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) Parse 29 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------------COMP_with:V_PASS-N---------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 30 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +------------------------APPOS-----------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) Parse 31 +---------------------------SUBJ:V_PASS-N---------------------------+ +--------------------------------APPOS-------------------------------+ +------------------SUBJ:V-N------------------+ +---------------------COMP_with:V_PASS-N---------------------+ | +--------------COMP_with:V-N-------------+ | +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) COMP_with:V-N (associated,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) COMP_with:V_PASS-N (recognized,factor) Parse 32 +---------------------------SUBJ:V_PASS-N---------------------------+ +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ | +---------------------------APPOS---------------------------+ | +-----------COMP_with:V_PASS-N-----------+ | +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 33 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ | +---------------COMP_with:N-N--------------+ | | +-----------COMP_with:V_PASS-N-----------+ | +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) Parse 34 +---------------------------SUBJ:V_PASS-N---------------------------+ +-------COMP_with:V_PASS-N------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V-N (associated,factor) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 35 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) Parse 36 +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,factor) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) Parse 37 +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V-N (associated,factor) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) Parse 38 +---------------------------SUBJ:V_PASS-N---------------------------+ +-------COMP_with:V_PASS-N------+ +-------------------COMP_with:N-N-------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 39 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------COMP_with:V-N---------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 40 +---------------------------SUBJ:V_PASS-N---------------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 41 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------COMP_with:N-N--------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) Parse 42 +------------------------APPOS-----------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +-------COMP_with:V_PASS-N------+ | +-----------COMP_with:V_PASS-N-----------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,factor) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 43 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +--------------------------COMP_with:V_PASS-N-------------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) Parse 44 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 45 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +----------------------------APPOS----------------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 46 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +--------------------------------APPOS-------------------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) COMP_with:V-N (associated,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 47 +------------------------APPOS-----------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +-------COMP_with:V_PASS-N------+ | +--------------------------COMP_with:V_PASS-N-------------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) Parse 48 +---------------------------SUBJ:V_PASS-N---------------------------+ +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ | +-------COMP_with:V_PASS-N------+ | +-----------COMP_with:V_PASS-N-----------+ | +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 49 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 50 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +------------------SUBJ:V-N------------------+ | | +-------COMP_with:V_PASS-N------+ | +-------------------COMP_with:N-N-------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 51 +---------------------------SUBJ:V_PASS-N---------------------------+ +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ +---------------------COMP_with:V_PASS-N---------------------+ +-------------------COMP_with:N-N-------------------+ | +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) Parse 52 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------------COMP_with:V_PASS-N---------------------+ +----------------------------APPOS----------------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,factor) APPOS (polymerase,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 53 +---------------------------SUBJ:V_PASS-N---------------------------+ +--------------COMP_with:V-N-------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V-N (associated,factor) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (polymerase,factor) Parse 54 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------COMP_with:V-N---------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V-N (associated,factor) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 55 +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,factor) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 56 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------COMP_with:V-N---------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 57 +---------------------------SUBJ:V_PASS-N---------------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (polymerase,factor) Parse 58 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------COMP_with:N-N--------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (polymerase,factor) Parse 59 +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ +-------------------COMP_with:N-N-------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) Parse 60 +--------MOD_ATT:N-N--------+ +-------COMP_with:V_PASS-N------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 61 +---------------------------SUBJ:V_PASS-N---------------------------+ +----------------------------APPOS----------------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) Parse 62 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +---------------------COMP_with:V_PASS-N---------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) Parse 63 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) COMP_with:V-N (associated,factor) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 64 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------COMP_with:V-N---------+ +--------------------------COMP_with:V_PASS-N-------------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,class) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 65 +---------------------------SUBJ:V_PASS-N---------------------------+ +----COMP_with:V_PASS-N---+ +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 66 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +---------------------COMP_with:V_PASS-N---------------------+ +--------COMP_with:V_PASS-N--------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) Parse 67 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +---------COMP_with:V-N---------+ +--------------------------COMP_with:V_PASS-N-------------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,class) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 68 +---------------------------SUBJ:V_PASS-N---------------------------+ +--------------------------------APPOS-------------------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) COMP_with:V-N (associated,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 69 +---------------------------SUBJ:V_PASS-N---------------------------+ +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 70 +---------------------------SUBJ:V_PASS-N---------------------------+ +--------------------------------APPOS-------------------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) COMP_with:V-N (associated,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) APPOS (RNA,GENEXXX) Parse 71 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +-------COMP_with:V_PASS-N------+ +--------------COMP_with:V-N-------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V-N (associated,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V_PASS-N (recognized,One) Parse 72 +---------------------------SUBJ:V_PASS-N---------------------------+ +-------COMP_with:V_PASS-N------+ +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 73 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +---------------------COMP_with:V_PASS-N---------------------+ +--------COMP_with:V_PASS-N--------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V-N (includes,class) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) Parse 74 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +--------------------------------APPOS-------------------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) COMP_with:V-N (associated,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) APPOS (RNA,GENEXXX) Parse 75 +---------------------------SUBJ:V_PASS-N---------------------------+ +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ | | +-----------COMP_with:V_PASS-N-----------+ | +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 76 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +---------------------------APPOS---------------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) MOD_ATT:N-N (sigma,early-sporulation) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,factor) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 77 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) Parse 78 +----------------------------APPOS----------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ +-------------------COMP_with:N-N-------------------+ | | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) Parse 79 +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ +--------------------------------APPOS-------------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) COMP_with:V-N (associated,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (associated,polymerase) Parse 80 +------------------------APPOS-----------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +-------COMP_with:V_PASS-N------+ | +-----------------COMP_with:V_PASS-N----------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (factor,sigma) COMP_with:V_PASS-N (recognized,early-sporulation) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 81 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +-------COMP_with:V_PASS-N------+ +----------------------------APPOS----------------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 82 +---------------------------SUBJ:V_PASS-N---------------------------+ +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ | +-------------------COMP_with:N-N-------------------+ | +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) Parse 83 +------------------------APPOS-----------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +-------COMP_with:V_PASS-N------+ | +--------------------------COMP_with:V_PASS-N-------------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) Parse 84 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +---------------COMP_with:N-N--------------+ +----------------------------APPOS----------------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) Parse 85 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) Parse 86 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ | +--------------COMP_with:V-N-------------+ | +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) COMP_with:V-N (associated,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) COMP_with:V_PASS-N (recognized,factor) Parse 87 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +----------------------------APPOS----------------------------+ +--------OBJ:V-N--------+ | | | +-----------COMP_with:V_PASS-N-----------+ | | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) APPOS (GENEXXX,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,factor) APPOS (polymerase,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 88 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +---------------------------APPOS---------------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,class) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 89 +---------------------------SUBJ:V_PASS-N---------------------------+ +--------------------------------APPOS-------------------------------+ +------------------SUBJ:V-N------------------+ | +------------------------APPOS-----------------------+ | +--------------COMP_with:V-N-------------+ | +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) COMP_with:V-N (associated,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) Parse 90 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +------------------SUBJ:V-N------------------+ | +---------------COMP_with:N-N--------------+ | +----------------------------APPOS----------------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) Parse 91 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +------------------------APPOS-----------------------+ +--------OBJ:V-N--------+ | | +---------------COMP_with:N-N--------------+ | +----------------------------APPOS----------------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) COMP_with:N-N (polymerase,factor) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,factor) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 92 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------COMP_with:V-N---------+ +--------------COMP_with:V-N-------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V-N (associated,factor) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 93 +---------------------------SUBJ:V_PASS-N---------------------------+ +--------------COMP_with:V-N-------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V-N (associated,factor) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 94 +---------------------------SUBJ:V_PASS-N---------------------------+---------------COMP_with:V_PASS-N--------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 95 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------COMP_with:N-N--------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) Parse 96 +---------------------------SUBJ:V_PASS-N---------------------------+---------------COMP_with:V_PASS-N--------------+ +-----------COMP_with:V_PASS-N-----------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,factor) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 97 +---------------------------SUBJ:V_PASS-N---------------------------+ +----------------------------APPOS----------------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_with:V_PASS-N (associated,primary) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 98 +---------------------------SUBJ:V_PASS-N---------------------------+ +-----------------COMP_with:V_PASS-N----------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) MOD_ATT:N-N (factor,sigma) COMP_with:V_PASS-N (recognized,early-sporulation) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 99 +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,factor) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 100 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +-----------COMP_with:V_PASS-N-----------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,factor) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) Parse 101 +---------------------------SUBJ:V_PASS-N---------------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (polymerase,factor) Parse 102 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,factor) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 103 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +---------------COMP_with:N-N--------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) Parse 104 +---------------------------SUBJ:V_PASS-N---------------------------+ +-----------------------COMP_with:V_PASS-N----------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V_PASS-N (associated,polymerase) Parse 105 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +---------------------COMP_with:V_PASS-N---------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,factor) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (associated,polymerase) Parse 106 +---------------------------APPOS---------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +---------COMP_with:V-N---------+ | | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) MOD_ATT:N-N (sigma,early-sporulation) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,factor) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 107 +---------------------------SUBJ:V_PASS-N---------------------------+ +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 108 +----------------------------APPOS----------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +--------COMP_with:V_PASS-N--------+ | +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 109 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +--------------------------COMP_with:V_PASS-N-------------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 110 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,primary) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 111 +---------------------------APPOS---------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +---------COMP_with:V-N---------+ | +-----------COMP_with:V_PASS-N-----------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,factor) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 112 +------------------------APPOS-----------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +-------COMP_with:V_PASS-N------+ | +-----------------COMP_with:V_PASS-N----------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V_PASS-N (recognized,early-sporulation) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 113 +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (associated,polymerase) Parse 114 +------------------------APPOS-----------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +-------COMP_with:V_PASS-N------+ | +--------------COMP_with:V-N-------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V-N (associated,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) Parse 115 +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,class) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 116 +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 117 +----------------------------APPOS----------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +---------COMP_with:V-N---------+ +-------------------COMP_with:N-N-------------------+ | +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 118 +----------------------------APPOS----------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +-------COMP_with:V_PASS-N------+ +-------------------COMP_with:N-N-------------------+ | +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 119 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------COMP_with:N-N--------------+ | +--------------COMP_with:V-N-------------+ | +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) COMP_with:V-N (associated,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) COMP_with:N-N (polymerase,factor) Parse 120 +----------------------------APPOS----------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------COMP_with:N-N--------------+ +-------------------COMP_with:N-N-------------------+ | +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) Parse 121 +----------------------------APPOS----------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ +-------------------COMP_with:N-N-------------------+ | | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 122 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +----------------------------APPOS----------------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 123 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +--------------------------COMP_with:V_PASS-N-------------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_with:N-N (polymerase,factor) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (sigma,primary) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 124 +---------------------------APPOS---------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +---------COMP_with:V-N---------+ | +----------------------------APPOS----------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 125 +--------MOD_ATT:N-N--------+ +---------------------COMP_with:V_PASS-N---------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 126 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +----------------------------APPOS----------------------------+ +--------OBJ:V-N--------+ | | | +-----------COMP_with:V_PASS-N-----------+ | | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) APPOS (GENEXXX,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,factor) APPOS (polymerase,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 127 +---------------------------APPOS---------------------------+ +----------------------------APPOS----------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +---------COMP_with:V-N---------+ | | +-----------COMP_with:V_PASS-N-----------+ | | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 128 +------------------------APPOS-----------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------COMP_with:N-N--------------+ | +--------------------------COMP_with:V_PASS-N-------------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) Parse 129 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +----------------------------APPOS----------------------------+ +--------OBJ:V-N--------+ | | | +-----------COMP_with:V_PASS-N-----------+ | | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) APPOS (GENEXXX,GENEXXX) COMP_with:N-N (polymerase,factor) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,factor) APPOS (polymerase,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 130 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +------------------------APPOS-----------------------+ +--------OBJ:V-N--------+ | | | +-------COMP_with:V_PASS-N------+ | | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 131 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +------------------------APPOS-----------------------+ +----------------------------APPOS----------------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) Parse 132 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +------------------------APPOS-----------------------+ +--------------------------------APPOS-------------------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) COMP_with:V-N (associated,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) COMP_with:N-N (polymerase,factor) Parse 133 +---------------------------SUBJ:V_PASS-N---------------------------+ +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ | +------------------------APPOS-----------------------+ +-------------------COMP_with:N-N-------------------+ | +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) Parse 134 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +------------------------APPOS-----------------------+ +--------OBJ:V-N--------+ | | | +-------COMP_with:V_PASS-N------+ | +----------------------------APPOS----------------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 135 +---------------------------SUBJ:V_PASS-N---------------------------+ +-------COMP_with:V_PASS-N------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 136 +---------------------------SUBJ:V_PASS-N---------------------------+ +----COMP_with:V_PASS-N---+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V-N (associated,factor) APPOS (factor,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (associated,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 137 +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,factor) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (associated,polymerase) Parse 138 +---------------------------SUBJ:V_PASS-N---------------------------+ +----COMP_with:V_PASS-N---+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 139 +---------------------------SUBJ:V_PASS-N---------------------------+ +----COMP_with:V_PASS-N---+ +-------------------COMP_with:N-N-------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 140 +---------------------------SUBJ:V_PASS-N---------------------------+---------------COMP_with:V_PASS-N--------------+ +-------------------COMP_with:N-N-------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 141 +---------------------------SUBJ:V_PASS-N---------------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) COMP_with:V-N (associated,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 142 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +--------------COMP_with:V-N-------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V-N (associated,factor) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 143 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 144 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +-----------------COMP_with:V_PASS-N----------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) MOD_ATT:N-N (factor,sigma) COMP_with:V_PASS-N (recognized,early-sporulation) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 145 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------COMP_with:V-N---------+ +--------------------------COMP_with:V_PASS-N-------------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,class) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 146 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +-----------------COMP_with:V_PASS-N----------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (factor,sigma) COMP_with:V_PASS-N (recognized,early-sporulation) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) Parse 147 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +---------------------COMP_with:V_PASS-N---------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) Parse 148 +---------------------------SUBJ:V_PASS-N---------------------------+ +-------COMP_with:V_PASS-N------+ +-----------------------COMP_with:V_PASS-N----------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V_PASS-N (associated,polymerase) Parse 149 +---------------------------SUBJ:V_PASS-N---------------------------+ +-------COMP_with:V_PASS-N------+ +-----------------------COMP_with:V_PASS-N----------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V_PASS-N (associated,polymerase) Parse 150 +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ +-----------------COMP_with:V_PASS-N----------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V_PASS-N (recognized,early-sporulation) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) Parse 151 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +------------------COMP_with:V_PASS-N------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V-N (associated,factor) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) COMP_with:V_PASS-N (recognized,sigma) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) Parse 152 +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ +----------------------------APPOS----------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) COMP_with:V_PASS-N (associated,early-sporulation) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (includes,GENEXXX) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 153 +---------------------------APPOS---------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +------COMP_with:V-N------+ | +-----------COMP_with:V_PASS-N-----------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,sigma) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,factor) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 154 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +---------------------COMP_with:V_PASS-N---------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,factor) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (associated,polymerase) Parse 155 +---------------------------SUBJ:V_PASS-N---------------------------+------------------COMP_with:V_PASS-N------------------+ +-------------------COMP_with:N-N-------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) COMP_with:V_PASS-N (recognized,sigma) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 156 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +-----------------------COMP_with:V_PASS-N----------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V_PASS-N (associated,polymerase) Parse 157 +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ +--------------------------------APPOS-------------------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_with:V-N (associated,early-sporulation) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) COMP_with:V_PASS-N (recognized,factor) Parse 158 +--------MOD_ATT:N-N--------+ +---------------------COMP_with:V_PASS-N---------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) COMP_with:V-N (associated,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V_PASS-N (recognized,factor) Parse 159 +--------MOD_ATT:N-N--------+ +---------------------COMP_with:V_PASS-N---------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 160 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_with:N-N (polymerase,factor) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 161 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +---------COMP_with:V-N---------+ +-----------------------COMP_with:V_PASS-N----------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V-N (includes,class) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:V_PASS-N (recognized,sigma) Parse 162 +----------------------------APPOS----------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +----COMP_with:V_PASS-N---+ | +-----------COMP_with:V_PASS-N-----------+ | +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 163 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +------------------COMP_with:V_PASS-N------------------+ +-----------COMP_with:V_PASS-N-----------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,factor) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) COMP_with:V_PASS-N (recognized,sigma) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 164 +---------------------------SUBJ:V_PASS-N---------------------------+ +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ | | +--------COMP_with:V_PASS-N--------+ | +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 165 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +---------------------COMP_with:V_PASS-N---------------------+ +-------------------COMP_with:N-N-------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 166 +---------------------------SUBJ:V_PASS-N---------------------------+------------------COMP_with:V_PASS-N------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,class) COMP_with:V_PASS-N (recognized,sigma) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) Parse 167 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------------COMP_with:V_PASS-N---------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) COMP_with:V_PASS-N (recognized,factor) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 168 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +-----------------------COMP_with:V_PASS-N----------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:V_PASS-N (recognized,sigma) COMP_with:N-N (polymerase,factor) Parse 169 +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ +----------------------------APPOS----------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 170 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ | +-----------COMP_with:V-N----------+ | | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) OBJ:V-N (with,factor) COMP_with:V-N (associated,sigma) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) COMP_with:V_PASS-N (recognized,factor) Parse 171 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +---------------------COMP_with:V_PASS-N---------------------+ +----------------------------APPOS----------------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (associated,early-sporulation) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,primary) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) Parse 172 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +--------------------------COMP_with:V_PASS-N-------------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 173 +---------------------------SUBJ:V_PASS-N---------------------------+------------------COMP_with:V_PASS-N------------------+ +--------------------------------APPOS-------------------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) COMP_with:V_PASS-N (recognized,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) Parse 174 +---------------------------SUBJ:V_PASS-N---------------------------+ +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ +---------------COMP_with:V_PASS-N--------------+ | +-----------COMP_with:V_PASS-N-----------+ | +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 175 +--------MOD_ATT:N-N--------+ +---------------COMP_with:N-N--------------+ +----------------------------APPOS----------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) COMP_with:N-N (polymerase,factor) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,factor) MOD_ATT:N-N (promoter,GENEXXX) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 176 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ | +--------------COMP_with:V-N-------------+ | +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) COMP_with:V-N (associated,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (associated,polymerase) Parse 177 +----------------------------APPOS----------------------------+ +--------MOD_ATT:N-N--------+ +-------COMP_with:V_PASS-N------+ | +-----------COMP_with:V_PASS-N-----------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,factor) MOD_ATT:N-N (promoter,GENEXXX) APPOS (polymerase,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 178 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ | +-----------COMP_with:V-N----------+ | +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) COMP_with:V-N (associated,sigma) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) COMP_with:V_PASS-N (recognized,factor) Parse 179 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +------------------SUBJ:V-N------------------+ | | +----COMP_with:V_PASS-N---+ | +--------------------------COMP_with:V_PASS-N-------------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (sigma,early-sporulation) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_with:V_PASS-N (recognized,factor) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 180 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +------------------------APPOS-----------------------+ +-----------------------COMP_with:V_PASS-N----------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:V_PASS-N (recognized,sigma) COMP_with:N-N (polymerase,factor) Parse 181 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +------------------SUBJ:V-N------------------+ | | +----COMP_with:V_PASS-N---+ | +--------------------------COMP_with:V_PASS-N-------------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (associated,RNA) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (recognized,factor) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) Parse 182 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +------------------SUBJ:V-N------------------+ | | +-------COMP_with:V_PASS-N------+ | +----------------------------APPOS----------------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (associated,early-sporulation) MOD_ATT:N-N (factor,sigma) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (polymerase,RNA) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 183 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +-------COMP_with:V_PASS-N------+ +--------------------------------APPOS-------------------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V-N (associated,factor) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (recognized,One) Parse 184 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +------------------------APPOS-----------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (polymerase,factor) Parse 185 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------------COMP_with:V_PASS-N---------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (sigma,primary) COMP_with:V_PASS-N (recognized,factor) SUBJ:V_PASS-N (recognized,One) Parse 186 +---------------------------SUBJ:V_PASS-N---------------------------+ +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ +---------------------COMP_with:V_PASS-N---------------------+ +-------------------COMP_with:N-N-------------------+ | +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 187 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +------------------------APPOS-----------------------+ +--------OBJ:V-N--------+ | | +---------------COMP_with:N-N--------------+ | +-----------COMP_with:V_PASS-N-----------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_with:N-N (polymerase,factor) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 188 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +------------------SUBJ:V-N------------------+ | +---------------COMP_with:N-N--------------+ | +--------------------------COMP_with:V_PASS-N-------------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (polymerase,factor) Parse 189 +----------------------------APPOS----------------------------+ +--------MOD_ATT:N-N--------+ +---------------------COMP_with:V_PASS-N---------------------+ | +-----------COMP_with:V_PASS-N-----------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,early-sporulation) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,factor) MOD_ATT:N-N (promoter,GENEXXX) APPOS (polymerase,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 190 +--------------------------------APPOS-------------------------------+ +--------MOD_ATT:N-N--------+ +---------------------COMP_with:V_PASS-N---------------------+ | +--------------COMP_with:V-N-------------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (associated,factor) COMP_with:V_PASS-N (recognized,factor) APPOS (RNA,GENEXXX) Parse 191 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------------COMP_with:V_PASS-N---------------------+ +-----------------------COMP_with:V_PASS-N----------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,primary) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V_PASS-N (recognized,One) Parse 192 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +------------------------APPOS-----------------------+ +--------OBJ:V-N--------+ | | | +-------COMP_with:V_PASS-N------+ | +-----------------COMP_with:V_PASS-N----------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) COMP_with:V_PASS-N (recognized,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 193 +----------------------------APPOS----------------------------+ +--------MOD_ATT:N-N--------+ +------------------------APPOS-----------------------+ | +-----------COMP_with:V_PASS-N-----------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,factor) MOD_ATT:N-N (sigma,primary) MOD_ATT:N-N (promoter,GENEXXX) APPOS (polymerase,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 194 +------------------------APPOS-----------------------+ +--------MOD_ATT:N-N--------+ | +-------COMP_with:V_PASS-N------+ | +--------------------------------APPOS-------------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (associated,factor) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) Parse 195 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +------------------------APPOS-----------------------+ +--------OBJ:V-N--------+ | | | +-------COMP_with:V_PASS-N------+ | +----------------------------APPOS----------------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) APPOS (polymerase,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 196 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +----------------------------APPOS----------------------------+ +--------OBJ:V-N--------+ | +---------------------COMP_with:V_PASS-N---------------------+ +-------------------COMP_with:N-N-------------------+ | | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 197 +---------------------------APPOS---------------------------+ +----------------------------APPOS----------------------------+ +--------MOD_ATT:N-N--------+ | +---------COMP_with:V-N---------+ | | +-----------COMP_with:V_PASS-N-----------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,early-sporulation) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,factor) APPOS (RNA,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) APPOS (polymerase,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 198 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +---------------------------APPOS---------------------------+ +--------OBJ:V-N--------+ | | | +---------COMP_with:V-N---------+ | +--------------------------COMP_with:V_PASS-N-------------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 199 +---------------------------SUBJ:V_PASS-N---------------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) Parse 200 +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 201 +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) Parse 202 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------COMP_with:N-N--------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) Parse 203 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------COMP_with:V-N---------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_with:V-N (associated,factor) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 204 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------COMP_with:V-N---------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 205 +---------------------------SUBJ:V_PASS-N---------------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 206 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------COMP_with:V-N---------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 207 +---------------------------SUBJ:V_PASS-N---------------------------+ +--------------------------------APPOS-------------------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,early-sporulation) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 208 +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ +--------COMP_with:V_PASS-N--------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 209 +---------------------------SUBJ:V_PASS-N---------------------------+ +-----------------------COMP_with:V_PASS-N----------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:V_PASS-N (recognized,sigma) COMP_with:N-N (polymerase,factor) Parse 210 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +---------------COMP_with:N-N--------------+ +--------COMP_with:V_PASS-N--------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) Parse 211 +---------------------------SUBJ:V_PASS-N---------------------------+ +------COMP_with:V-N------+ +--------------------------COMP_with:V_PASS-N-------------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_with:V-N (associated,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 212 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +-----------COMP_with:V-N----------+ | | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (polymerase,RNA) COMP_with:V-N (associated,sigma) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 213 +----------------------------APPOS----------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +---------COMP_with:V-N---------+ | +--------COMP_with:V_PASS-N--------+ | | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) SUBJ:V_PASS-N (activated,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (includes,GENEXXX) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 214 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------COMP_with:V-N---------+ +--------------------------------APPOS-------------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) COMP_with:V-N (associated,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) APPOS (RNA,GENEXXX) Parse 215 +--------MOD_ATT:N-N--------+ +-------COMP_with:V_PASS-N------+ +--------------COMP_with:V-N-------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V-N (associated,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) Parse 216 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) APPOS (GENEXXX,GENEXXX) COMP_with:V-N (associated,primary) COMP_with:V_PASS-N (associated,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 217 +--------MOD_ATT:N-N--------+ +-------COMP_with:V_PASS-N------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 218 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------COMP_with:V-N---------+ +----------------------------APPOS----------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 219 +------------------------APPOS-----------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +-------COMP_with:V_PASS-N------+ | +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 220 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 221 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +---------COMP_with:V-N---------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V-N (associated,factor) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 222 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +----------------------------APPOS----------------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,primary) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 223 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +----COMP_with:V_PASS-N---+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) OBJ:V-N (with,factor) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 224 +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ +-----------------COMP_with:V_PASS-N----------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (factor,sigma) COMP_with:V_PASS-N (recognized,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 225 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------COMP_with:N-N--------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (polymerase,factor) Parse 226 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------COMP_with:N-N--------------+ +--------------------------------APPOS-------------------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) COMP_with:V-N (associated,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) COMP_with:N-N (polymerase,factor) Parse 227 +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ +----------------------------APPOS----------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) OBJ:V-N (associated,RNA) COMP_with:V_PASS-N (associated,early-sporulation) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (includes,GENEXXX) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 228 +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ +-----------------------COMP_with:V_PASS-N----------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (associated,polymerase) Parse 229 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +------------------SUBJ:V-N------------------+ | | +-------COMP_with:V_PASS-N------+ | +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 230 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +---------------------COMP_with:V_PASS-N---------------------+ +-----------COMP_with:V-N----------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_with:V-N (associated,sigma) Parse 231 +---------------------------SUBJ:V_PASS-N---------------------------+------------------COMP_with:V_PASS-N------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (sigma,primary) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) Parse 232 +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ +-----------------COMP_with:V_PASS-N----------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (factor,sigma) COMP_with:V_PASS-N (recognized,early-sporulation) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) Parse 233 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +-------------------COMP_with:N-N-------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_with:N-N (polymerase,factor) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 234 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +------------------------APPOS-----------------------+ +-------------------COMP_with:N-N-------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_with:V_PASS-N (associated,primary) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 235 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +------------------SUBJ:V-N------------------+ | | +------COMP_with:V-N------+ | +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) MOD_ATT:N-N (sigma,early-sporulation) COMP_with:V-N (associated,sigma) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 236 +---------------------------SUBJ:V_PASS-N---------------------------+ +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ | +-------COMP_with:V_PASS-N------+ | +--------COMP_with:V_PASS-N--------+ | +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (polymerase,RNA) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 237 +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ +-----------------------COMP_with:V_PASS-N----------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) COMP_with:V_PASS-N (recognized,sigma) Parse 238 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +----------------------------APPOS----------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) COMP_with:V-N (associated,primary) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 239 +--------MOD_ATT:N-N--------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_with:N-N (polymerase,factor) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (sigma,primary) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 240 +--------MOD_ATT:N-N--------+ +---------------------COMP_with:V_PASS-N---------------------+ +-------------------COMP_with:N-N-------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 241 +----------------------------APPOS----------------------------+ +--------MOD_ATT:N-N--------+ | +-----------COMP_with:V_PASS-N-----------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,factor) MOD_ATT:N-N (promoter,GENEXXX) APPOS (polymerase,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 242 +--------MOD_ATT:N-N--------+ +------------------------APPOS-----------------------+ +-----------COMP_with:V_PASS-N-----------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 243 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +------------------SUBJ:V-N------------------+ | +---------------COMP_with:N-N--------------+ | +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) Parse 244 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +------------------SUBJ:V-N------------------+ | | +---------COMP_with:V-N---------+ | +-------------------COMP_with:N-N-------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 245 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +---------COMP_with:V-N---------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 246 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +----COMP_with:V_PASS-N---+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_with:V_PASS-N (associated,sigma) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 247 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,class) SUBJ:V-N (associated,polymerase) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 248 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +------------------SUBJ:V-N------------------+ | | +----COMP_with:V_PASS-N---+ | +--------------------------COMP_with:V_PASS-N-------------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (recognized,factor) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) Parse 249 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +----------------------------APPOS----------------------------+ +--------OBJ:V-N--------+ | | +-------------------COMP_with:N-N-------------------+ | | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 250 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +------------------------APPOS-----------------------+ +--------OBJ:V-N--------+ | | | +----COMP_with:V_PASS-N---+ | +-----------COMP_with:V_PASS-N-----------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 251 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +------------------SUBJ:V-N------------------+ | | +-------COMP_with:V_PASS-N------+ | +-----------------------COMP_with:V_PASS-N----------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,sigma) Parse 252 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +--------------------------------APPOS-------------------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) COMP_with:V-N (associated,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) COMP_with:N-N (polymerase,factor) Parse 253 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) APPOS (RNA,GENEXXX) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 254 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------------COMP_with:V_PASS-N---------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_with:V_PASS-N (recognized,factor) SUBJ:V_PASS-N (recognized,One) Parse 255 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------------COMP_with:V_PASS-N---------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (factor,early-sporulation) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 256 +------------------------APPOS-----------------------+ +--------MOD_ATT:N-N--------+ | +-------COMP_with:V_PASS-N------+ | +--------------------------COMP_with:V_PASS-N-------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 257 +--------MOD_ATT:N-N--------+ +---------------------COMP_with:V_PASS-N---------------------+ +--------------------------------APPOS-------------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (associated,factor) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) Parse 258 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------------COMP_with:V_PASS-N---------------------+ +----------------------------APPOS----------------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) APPOS (polymerase,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 259 +----------------------------APPOS----------------------------+ +--------MOD_ATT:N-N--------+ +---------------------COMP_with:V_PASS-N---------------------+ +-------------------COMP_with:N-N-------------------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 260 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +------------------SUBJ:V-N------------------+ | | +----COMP_with:V_PASS-N---+ | +----------------------------APPOS----------------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (with,factor) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 261 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +------------------------APPOS-----------------------+ +----------------------------APPOS----------------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) Parse 262 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +------------------SUBJ:V-N------------------+ | +---------------COMP_with:N-N--------------+ | +--------------------------------APPOS-------------------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) COMP_with:V-N (associated,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) COMP_with:N-N (polymerase,factor) Parse 263 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ | | +---------COMP_with:V-N---------+ | +-------------------COMP_with:N-N-------------------+ | +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 264 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +------------------------APPOS-----------------------+ +--------OBJ:V-N--------+ | | +---------------COMP_with:N-N--------------+ | +--------------------------COMP_with:V_PASS-N-------------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_with:N-N (polymerase,factor) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 265 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +------------------------APPOS-----------------------+ +--------------------------------APPOS-------------------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) COMP_with:N-N (polymerase,factor) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) COMP_with:V-N (associated,factor) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (recognized,One) Parse 266 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +------------------------APPOS-----------------------+ +--------OBJ:V-N--------+ | | +---------------COMP_with:N-N--------------+ | +----------------------------APPOS----------------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) APPOS (GENEXXX,GENEXXX) COMP_with:N-N (polymerase,factor) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,factor) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 267 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------COMP_with:V-N---------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 268 +---------------------------SUBJ:V_PASS-N---------------------------+ +----COMP_with:V_PASS-N---+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (associated,sigma) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 269 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------COMP_with:N-N--------------+ +--------COMP_with:V_PASS-N--------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) Parse 270 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) COMP_with:V-N (associated,primary) COMP_with:V_PASS-N (associated,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 271 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +----COMP_with:V_PASS-N---+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) SUBJ:V_PASS-N (activated,class) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 272 +---------------------------SUBJ:V_PASS-N---------------------------+ +-------COMP_with:V_PASS-N------+ +-----------COMP_with:V-N----------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_with:V-N (associated,sigma) SUBJ:V_PASS-N (associated,polymerase) Parse 273 +---------------------------SUBJ:V_PASS-N---------------------------+ +----------------------------APPOS----------------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (associated,early-sporulation) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,primary) SUBJ:V_PASS-N (activated,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 274 +---------------------------SUBJ:V_PASS-N---------------------------+ +-------COMP_with:V_PASS-N------+ +-----------COMP_with:V-N----------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_with:V-N (associated,sigma) SUBJ:V_PASS-N (associated,polymerase) Parse 275 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------COMP_with:N-N--------------+ +-----------------COMP_with:V_PASS-N----------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) COMP_with:V_PASS-N (recognized,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (polymerase,factor) Parse 276 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ +-----------COMP_with:V_PASS-N-----------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,factor) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 277 +---------------------------SUBJ:V_PASS-N---------------------------+------------------COMP_with:V_PASS-N------------------+ +--------COMP_with:V_PASS-N--------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 278 +---------------------------SUBJ:V_PASS-N---------------------------+ +----------------------------APPOS----------------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (associated,early-sporulation) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) Parse 279 +---------------------------SUBJ:V_PASS-N---------------------------+ +-----------------------COMP_with:V_PASS-N----------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:V_PASS-N (recognized,sigma) COMP_with:N-N (polymerase,factor) Parse 280 +--------MOD_ATT:N-N--------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+---------COMP_with:V-N---------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 281 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) COMP_with:V_PASS-N (associated,early-sporulation) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,primary) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 282 +---------------------------SUBJ:V_PASS-N---------------------------+ +-----------------------COMP_with:V_PASS-N----------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V_PASS-N (associated,polymerase) Parse 283 +----------------------------APPOS----------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +--------COMP_with:V_PASS-N--------+ | | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) SUBJ:V_PASS-N (activated,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) Parse 284 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +------------------COMP_with:V_PASS-N------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) COMP_with:V_PASS-N (recognized,sigma) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 285 +---------------------------SUBJ:V_PASS-N---------------------------+------------------COMP_with:V_PASS-N------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) COMP_with:V_PASS-N (recognized,sigma) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 286 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) APPOS (GENEXXX,GENEXXX) COMP_with:V-N (associated,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 287 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +-------------------COMP_with:N-N-------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,primary) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 288 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +---------------------COMP_with:V_PASS-N---------------------+ +-----------------------COMP_with:N-N----------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) Parse 289 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +-----------COMP_with:V-N----------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_with:V-N (associated,sigma) COMP_with:N-N (polymerase,factor) Parse 290 +--------MOD_ATT:N-N--------+ +---------------COMP_with:V_PASS-N--------------+ +-----------COMP_with:V_PASS-N-----------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 291 +---------------------------SUBJ:V_PASS-N---------------------------+------------------COMP_with:V_PASS-N------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 292 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,primary) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 293 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +---------------COMP_with:N-N--------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_with:N-N (polymerase,factor) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V-N (associated,factor) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 294 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +---------------------COMP_with:V_PASS-N---------------------+ +--------COMP_with:V_PASS-N--------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V-N (includes,class) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 295 +------------------------APPOS-----------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +-------COMP_with:V_PASS-N------+ | +-----------------------COMP_with:N-N----------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) Parse 296 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +----COMP_with:V_PASS-N---+ +--------------COMP_with:V-N-------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) MOD_ATT:N-N (sigma,primary) COMP_with:V-N (associated,factor) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V_PASS-N (recognized,One) Parse 297 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +--------------COMP_with:V-N-------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_with:N-N (polymerase,factor) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V-N (associated,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V_PASS-N (recognized,One) Parse 298 +----------------------------APPOS----------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +--------COMP_with:V_PASS-N--------+ | +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) Parse 299 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +-------COMP_with:V_PASS-N------+ | +-----------COMP_with:V-N----------+ | +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (polymerase,RNA) COMP_with:V-N (associated,sigma) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 300 +---------------------------APPOS---------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ | +-----------COMP_with:V_PASS-N-----------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,factor) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 301 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +------------------COMP_with:N-N------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_with:N-N (RNA,factor) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,class) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 302 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +-------COMP_with:V_PASS-N------+ | +-----------COMP_with:V-N----------+ | +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (polymerase,RNA) COMP_with:V-N (associated,sigma) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 303 +--------MOD_ATT:N-N--------+ +---------------------COMP_with:V_PASS-N---------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 304 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +-----------------------COMP_with:V_PASS-N----------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,sigma) Parse 305 +--------MOD_ATT:N-N--------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+---------COMP_with:V-N---------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (sigma,primary) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 306 +---------------------------SUBJ:V_PASS-N---------------------------+ +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ | +----COMP_with:V_PASS-N---+ | +--------COMP_with:V_PASS-N--------+ | +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_with:V_PASS-N (associated,sigma) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 307 +------------------------APPOS-----------------------+ +--------MOD_ATT:N-N--------+ | +-------COMP_with:V_PASS-N------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) SUBJ:V-N (includes,promoter) COMP_with:V_PASS-N (associated,early-sporulation) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 308 +----------------------------APPOS----------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ | +--------COMP_with:V_PASS-N--------+ | | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,primary) COMP_with:V_PASS-N (associated,sigma) SUBJ:V_PASS-N (activated,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 309 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +------COMP_with:V-N------+ +----------------------------APPOS----------------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) COMP_with:V-N (associated,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 310 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +-----------------COMP_with:V_PASS-N----------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_with:N-N (polymerase,factor) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,primary) COMP_with:V_PASS-N (recognized,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 311 +---------------------------SUBJ:V_PASS-N---------------------------+---------------COMP_with:V_PASS-N--------------+ +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 312 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +--------------------------------APPOS-------------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,early-sporulation) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) APPOS (RNA,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 313 +---------------------------SUBJ:V_PASS-N---------------------------+ +--------------------------------APPOS-------------------------------+ +------------------SUBJ:V-N------------------+ | | +-----------COMP_with:V-N----------+ | +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (polymerase,RNA) COMP_with:V-N (associated,sigma) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) COMP_with:N-N (polymerase,factor) Parse 314 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------------COMP_with:V_PASS-N---------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 315 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------------COMP_with:V_PASS-N---------------------+ +--------COMP_with:V_PASS-N--------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,primary) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_with:V_PASS-N (associated,sigma) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 316 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +------------------------APPOS-----------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) MOD_ATT:N-N (sigma,early-sporulation) COMP_with:V_PASS-N (associated,primary) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 317 +--------MOD_ATT:N-N--------+ +------------------------APPOS-----------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_with:N-N (polymerase,factor) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 318 +---------------------------APPOS---------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ | +----------------------------APPOS----------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 319 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------------COMP_with:V_PASS-N---------------------+ +-----------------COMP_with:V_PASS-N----------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,primary) COMP_with:V_PASS-N (recognized,early-sporulation) COMP_with:V_PASS-N (recognized,factor) SUBJ:V_PASS-N (recognized,One) Parse 320 +---------------------------APPOS---------------------------+ +----------------------------APPOS----------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +------COMP_with:V-N------+ | | +-----------COMP_with:V_PASS-N-----------+ | | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 321 +--------MOD_ATT:N-N--------+ +---------------------COMP_with:V_PASS-N---------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V_PASS-N (recognized,factor) Parse 322 +------------------------APPOS-----------------------+ +----------------------------APPOS----------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +----COMP_with:V_PASS-N---+ | | +--------COMP_with:V_PASS-N--------+ | +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (with,factor) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 323 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +----------------------------APPOS----------------------------+ +--------OBJ:V-N--------+ | | +-------COMP_with:V_PASS-N------+ | +--------COMP_with:V_PASS-N--------+ | | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . COMP_with:V_PASS-N (associated,sigma) SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 324 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------------------------------APPOS-------------------------------+ +--------OBJ:V-N--------+ | | +----COMP_with:V_PASS-N---+ | +--------------COMP_with:V-N-------------+ | | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) APPOS (GENEXXX,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) OBJ:V-N (with,factor) COMP_with:V-N (associated,factor) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (recognized,One) Parse 325 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------------------------------APPOS-------------------------------+ +--------OBJ:V-N--------+ | | +----COMP_with:V_PASS-N---+ | +--------------COMP_with:V-N-------------+ | | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) COMP_with:V-N (associated,factor) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (recognized,One) Parse 326 +--------------------------------APPOS-------------------------------+ +--------MOD_ATT:N-N--------+ +---------------------COMP_with:V_PASS-N---------------------+ | +--------------COMP_with:V-N-------------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (associated,factor) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 327 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +------------------COMP_with:V_PASS-N------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) COMP_with:V_PASS-N (recognized,sigma) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 328 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +------------------------APPOS-----------------------+ +--------OBJ:V-N--------+ | | | +-------COMP_with:V_PASS-N------+ | +-----------------COMP_with:V_PASS-N----------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) COMP_with:V_PASS-N (recognized,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 329 +----------------------------APPOS----------------------------+ +--------MOD_ATT:N-N--------+ +---------------------COMP_with:V_PASS-N---------------------+ +-------------------COMP_with:N-N-------------------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 330 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +------------------SUBJ:V-N------------------+ | | +----COMP_with:V_PASS-N---+ | +--------------------------------APPOS-------------------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (associated,RNA) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) COMP_with:V-N (associated,factor) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) Parse 331 +----------------------------APPOS----------------------------+ +--------MOD_ATT:N-N--------+ +---------------------COMP_with:V_PASS-N---------------------+ +-------------------COMP_with:N-N-------------------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 332 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------------COMP_with:V_PASS-N---------------------+ +--------------------------------APPOS-------------------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,early-sporulation) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (recognized,One) Parse 333 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------------COMP_with:V_PASS-N---------------------+ +--------------------------------APPOS-------------------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) APPOS (GENEXXX,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V-N (associated,factor) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 334 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +------------------------APPOS-----------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_with:N-N (polymerase,factor) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V_PASS-N (recognized,One) Parse 335 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +----------------------------APPOS----------------------------+ +--------OBJ:V-N--------+ | +---------------------COMP_with:V_PASS-N---------------------+ +-------------------COMP_with:N-N-------------------+ | | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 336 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------------COMP_with:V_PASS-N---------------------+ +----------------------------APPOS----------------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 337 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +------------------------APPOS-----------------------+ +--------OBJ:V-N--------+ | | | +----COMP_with:V_PASS-N---+ | +--------------------------COMP_with:V_PASS-N-------------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_with:V_PASS-N (associated,sigma) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 338 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +------------------------APPOS-----------------------+ +--------OBJ:V-N--------+ | | +---------------COMP_with:N-N--------------+ | +--------------------------COMP_with:V_PASS-N-------------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_with:N-N (polymerase,factor) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V_PASS-N (recognized,One) Parse 339 +------------------------APPOS-----------------------+ +----------------------------APPOS----------------------------+ +--------MOD_ATT:N-N--------+ +---------------COMP_with:N-N--------------+ | +-------------------COMP_with:N-N-------------------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_with:N-N (polymerase,factor) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 340 +---------------------------SUBJ:V_PASS-N---------------------------+ +-----------COMP_with:V-N----------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_with:V-N (associated,sigma) SUBJ:V_PASS-N (associated,polymerase) Parse 341 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------COMP_with:N-N--------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) Parse 342 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 343 +---------------------------SUBJ:V_PASS-N---------------------------+ +------COMP_with:V-N------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_with:V-N (associated,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,factor) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 344 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +-----------COMP_with:V_PASS-N-----------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,factor) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_with:V_PASS-N (associated,primary) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 345 +---------------------------SUBJ:V_PASS-N---------------------------+---------------COMP_with:V_PASS-N--------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 346 +---------------------------SUBJ:V_PASS-N---------------------------+ +-------COMP_with:V_PASS-N------+ +-----------------------COMP_with:N-N----------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 347 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +----COMP_with:V_PASS-N---+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V-N (associated,factor) APPOS (factor,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 348 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ +-----------COMP_with:V_PASS-N-----------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,factor) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 349 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +-------COMP_with:V_PASS-N------+ +-----------COMP_with:V-N----------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_with:V-N (associated,sigma) SUBJ:V_PASS-N (associated,polymerase) Parse 350 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +----COMP_with:V_PASS-N---+ +--------------COMP_with:V-N-------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V-N (associated,factor) APPOS (factor,GENEXXX) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 351 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +---------COMP_with:V-N---------+ +--------COMP_with:V_PASS-N--------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V-N (includes,class) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 352 +---------------------------SUBJ:V_PASS-N---------------------------+ +-----------------------COMP_with:V_PASS-N----------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) COMP_with:V_PASS-N (recognized,sigma) Parse 353 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +----COMP_with:V_PASS-N---+ +-------------------COMP_with:N-N-------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 354 +--------MOD_ATT:N-N--------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 355 +------------------------APPOS-----------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +----COMP_with:V_PASS-N---+ | +--------COMP_with:V_PASS-N--------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (associated,sigma) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 356 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +-----------------------COMP_with:V_PASS-N----------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) COMP_with:V_PASS-N (associated,primary) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (with,factor) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V_PASS-N (associated,polymerase) Parse 357 +------------------------APPOS-----------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +-------COMP_with:V_PASS-N------+ | +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) COMP_with:V-N (associated,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) Parse 358 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +---------------COMP_with:V_PASS-N--------------+ +--------------COMP_with:V-N-------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,factor) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 359 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +---------COMP_with:V-N---------+ +-----------------COMP_with:V_PASS-N----------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) COMP_with:V_PASS-N (recognized,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 360 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) COMP_with:V-N (associated,factor) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 361 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +-------COMP_with:V_PASS-N------+ +-----------------COMP_with:V_PASS-N----------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) COMP_with:V_PASS-N (recognized,early-sporulation) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 362 +---------------------------SUBJ:V_PASS-N---------------------------+ +----COMP_with:V_PASS-N---+ +--------------------------COMP_with:V_PASS-N-------------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 363 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +------------------COMP_with:V_PASS-N------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,factor) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) COMP_with:V_PASS-N (recognized,sigma) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 364 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +---------------COMP_with:N-N--------------+ +-----------------COMP_with:V_PASS-N----------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (factor,sigma) COMP_with:V_PASS-N (recognized,early-sporulation) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) Parse 365 +---------------------------SUBJ:V_PASS-N---------------------------+---------------COMP_with:V_PASS-N--------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) Parse 366 +---------------------------SUBJ:V_PASS-N---------------------------+------------------COMP_with:V_PASS-N------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (sigma,primary) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 367 +------------------------APPOS-----------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------COMP_with:N-N--------------+ | +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) COMP_with:V-N (associated,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (polymerase,factor) Parse 368 +---------------------------SUBJ:V_PASS-N---------------------------+------------------COMP_with:V_PASS-N------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) Parse 369 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +-----------------COMP_with:V_PASS-N----------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V_PASS-N (recognized,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 370 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +-------------------COMP_with:N-N-------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 371 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +-----------------------COMP_with:V_PASS-N----------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:V_PASS-N (recognized,sigma) COMP_with:N-N (polymerase,factor) Parse 372 +---------------------------SUBJ:V_PASS-N---------------------------+------------------COMP_with:V_PASS-N------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 373 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +---------------COMP_with:N-N--------------+ +--------------COMP_with:V-N-------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_with:N-N (polymerase,factor) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V-N (associated,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V_PASS-N (recognized,One) Parse 374 +----------------------------APPOS----------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+---------------COMP_with:V_PASS-N--------------+ +-------------------COMP_with:N-N-------------------+ | | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 375 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +---------------------------APPOS---------------------------+ +-----------COMP_with:V_PASS-N-----------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) COMP_with:V-N (associated,primary) COMP_with:V_PASS-N (associated,factor) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 376 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +-------COMP_with:V_PASS-N------+ +-----------------------COMP_with:N-N----------------------+ | +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 377 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +---------------COMP_with:V_PASS-N--------------+ +----------------------------APPOS----------------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (associated,early-sporulation) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) OBJ:V-N (with,factor) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 378 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------COMP_with:V_PASS-N--------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (recognized,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 379 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +-----------------COMP_with:V_PASS-N----------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_with:N-N (polymerase,factor) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) COMP_with:V_PASS-N (recognized,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 380 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +----------------------------APPOS----------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) COMP_with:V_PASS-N (associated,early-sporulation) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 381 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +---------------COMP_with:V_PASS-N--------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (recognized,factor) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) Parse 382 +------------------------APPOS-----------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------COMP_with:N-N--------------+ | +-----------------COMP_with:V_PASS-N----------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) COMP_with:V_PASS-N (recognized,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (polymerase,factor) Parse 383 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +------------------------APPOS-----------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,primary) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 384 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_with:V_PASS-N (associated,primary) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (with,factor) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 385 +---------------------------SUBJ:V_PASS-N---------------------------+------------------COMP_with:V_PASS-N------------------+ +--------------------------------APPOS-------------------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) COMP_with:V_PASS-N (recognized,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 386 +----------------------------APPOS----------------------------+ +--------MOD_ATT:N-N--------+ +----COMP_with:V_PASS-N---+ | +-----------COMP_with:V_PASS-N-----------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,factor) COMP_with:V_PASS-N (associated,sigma) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) APPOS (polymerase,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 387 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +--------------------------------APPOS-------------------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) COMP_with:V-N (associated,early-sporulation) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (recognized,One) Parse 388 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +---------------COMP_with:V_PASS-N--------------+ +--------------------------------APPOS-------------------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,class) COMP_with:V-N (associated,factor) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 389 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------------COMP_with:V_PASS-N---------------------+ +-------------------COMP_with:N-N-------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 390 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +---------------------COMP_with:V_PASS-N---------------------+ +-----------------------COMP_with:V_PASS-N----------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_with:V_PASS-N (recognized,sigma) Parse 391 +----------------------------APPOS----------------------------+ +--------MOD_ATT:N-N--------+ +-------COMP_with:V_PASS-N------+ +-------------------COMP_with:N-N-------------------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 392 +--------MOD_ATT:N-N--------+ +---------------COMP_with:N-N--------------+ +--------------------------------APPOS-------------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) COMP_with:N-N (polymerase,factor) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (associated,factor) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) Parse 393 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +---------------------------APPOS---------------------------+ +--------OBJ:V-N--------+ | | | +---------COMP_with:V-N---------+ | | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_with:V_PASS-N (associated,early-sporulation) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 394 +------------------------APPOS-----------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +-------COMP_with:V_PASS-N------+ | +--------------------------------APPOS-------------------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_with:V-N (associated,early-sporulation) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) Parse 395 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------------COMP_with:V_PASS-N---------------------+ +-----------------------COMP_with:V_PASS-N----------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,primary) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 396 +------------------------APPOS-----------------------+ +--------MOD_ATT:N-N--------+ | +-------COMP_with:V_PASS-N------+ | +--------------------------COMP_with:V_PASS-N-------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (promoter,GENEXXX) Parse 397 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +------------------------APPOS-----------------------+ +--------OBJ:V-N--------+ | | | +----COMP_with:V_PASS-N---+ | +-------------------COMP_with:N-N-------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 398 +--------MOD_ATT:N-N--------+ +------------------------APPOS-----------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_with:N-N (polymerase,factor) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (promoter,GENEXXX) Parse 399 +--------MOD_ATT:N-N--------+ +---------------------COMP_with:V_PASS-N---------------------+ +----------------------------APPOS----------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,factor) MOD_ATT:N-N (promoter,GENEXXX) APPOS (polymerase,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 400 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +------------------------APPOS-----------------------+ +--------OBJ:V-N--------+ | | | +-------COMP_with:V_PASS-N------+ | +-----------------COMP_with:V_PASS-N----------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) COMP_with:V_PASS-N (recognized,early-sporulation) SUBJ:V_PASS-N (recognized,One) Parse 401 +------------------------APPOS-----------------------+ +--------MOD_ATT:N-N--------+ +---------------COMP_with:N-N--------------+ | +--------------------------COMP_with:V_PASS-N-------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_with:N-N (polymerase,factor) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (promoter,GENEXXX) Parse 402 +---------------------------SUBJ:V_PASS-N---------------------------+ +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ | +---------------------------APPOS---------------------------+ | +--------COMP_with:V_PASS-N--------+ | +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 403 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ | | +----COMP_with:V_PASS-N---+ | +-------------------COMP_with:N-N-------------------+ | +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 404 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ | +---------------COMP_with:N-N--------------+ | | +--------COMP_with:V_PASS-N--------+ | +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (polymerase,RNA) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) Parse 405 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +----------------------------APPOS----------------------------+ +--------OBJ:V-N--------+ | +------------------COMP_with:V_PASS-N------------------+ | +-----------COMP_with:V_PASS-N-----------+ | | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,factor) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) COMP_with:V_PASS-N (recognized,sigma) APPOS (polymerase,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 406 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +------------------------APPOS-----------------------+ +--------OBJ:V-N--------+ | | | +-------COMP_with:V_PASS-N------+ | +--------------------------------APPOS-------------------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) COMP_with:V-N (associated,early-sporulation) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (recognized,One) Parse 407 +--------------------------------APPOS-------------------------------+ +--------MOD_ATT:N-N--------+ +------------------------APPOS-----------------------+ | +--------------COMP_with:V-N-------------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) COMP_with:N-N (polymerase,factor) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (associated,factor) APPOS (RNA,GENEXXX) Parse 408 +------------------------APPOS-----------------------+ +----------------------------APPOS----------------------------+ +--------MOD_ATT:N-N--------+ | +-------COMP_with:V_PASS-N------+ | +-------------------COMP_with:N-N-------------------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 409 +------------------------APPOS-----------------------+ +----------------------------APPOS----------------------------+ +--------MOD_ATT:N-N--------+ | +-------COMP_with:V_PASS-N------+ | +-------------------COMP_with:N-N-------------------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 410 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------------------------------APPOS-------------------------------+ +--------OBJ:V-N--------+ | | +------------------------APPOS-----------------------+ | +-----------COMP_with:V-N----------+ | | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_with:V-N (associated,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (recognized,One) Parse 411 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +---------------------------APPOS---------------------------+ +----------------------------APPOS----------------------------+ +--------OBJ:V-N--------+ | | | +------COMP_with:V-N------+ | | +-----------COMP_with:V_PASS-N-----------+ | | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,early-sporulation) COMP_with:V-N (associated,sigma) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) APPOS (GENEXXX,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,factor) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) APPOS (polymerase,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 412 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ +--------------COMP_with:V-N-------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,factor) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 413 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +--------------COMP_with:V-N-------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V-N (associated,factor) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) COMP_with:V-N (associated,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 414 +---------------------------SUBJ:V_PASS-N---------------------------+ +------COMP_with:V-N------+ +--------COMP_with:V_PASS-N--------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) COMP_with:V-N (associated,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 415 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) COMP_with:V-N (associated,early-sporulation) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (polymerase,factor) Parse 416 +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ +-----------COMP_with:V-N----------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (recognized,factor) COMP_with:V-N (associated,sigma) SUBJ:V-N (associated,polymerase) Parse 417 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +---------------COMP_with:N-N--------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) COMP_with:V-N (associated,early-sporulation) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (polymerase,factor) Parse 418 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,primary) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 419 +---------------------------SUBJ:V_PASS-N---------------------------+------------------COMP_with:V_PASS-N------------------+ +-----------COMP_with:V-N----------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_with:V-N (associated,sigma) Parse 420 +--------MOD_ATT:N-N--------+ +-------COMP_with:V_PASS-N------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_with:V-N (associated,early-sporulation) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (promoter,GENEXXX) Parse 421 +---------------------------SUBJ:V_PASS-N---------------------------+---------------COMP_with:V_PASS-N--------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 422 +---------------------------SUBJ:V_PASS-N---------------------------+ +----COMP_with:V_PASS-N---+ +-----------------COMP_with:V_PASS-N----------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) COMP_with:V_PASS-N (recognized,early-sporulation) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 423 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +-----------------------COMP_with:N-N----------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (polymerase,factor) Parse 424 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +----COMP_with:V_PASS-N---+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) OBJ:V-N (with,factor) OBJ:V-N (with,factor) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 425 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ +----------------------------APPOS----------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 426 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +---------COMP_with:V-N---------+ +-----------------COMP_with:V_PASS-N----------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) COMP_with:V_PASS-N (recognized,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 427 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +-------COMP_with:V_PASS-N------+ +-----------------------COMP_with:N-N----------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 428 +---------------------------SUBJ:V_PASS-N---------------------------+ +----COMP_with:V_PASS-N---+ +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (associated,early-sporulation) APPOS (factor,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 429 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +---------------COMP_with:V_PASS-N--------------+ +-----------COMP_with:V_PASS-N-----------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,factor) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 430 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +---------------COMP_with:N-N--------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) COMP_with:V-N (associated,early-sporulation) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_with:N-N (polymerase,factor) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 431 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +------COMP_with:V-N------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,sigma) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) COMP_with:V-N (associated,factor) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 432 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +-----------------------COMP_with:N-N----------------------+ | | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) APPOS (RNA,GENEXXX) Parse 433 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +------------------COMP_with:V_PASS-N------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,factor) APPOS (factor,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) COMP_with:V_PASS-N (recognized,sigma) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 434 +--------MOD_ATT:N-N--------+ +---------COMP_with:V-N---------+ +-----------------COMP_with:V_PASS-N----------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V_PASS-N (recognized,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 435 +--------MOD_ATT:N-N--------+ +---------------------COMP_with:V_PASS-N---------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) COMP_with:V-N (associated,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 436 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +-----------------------COMP_with:N-N----------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) Parse 437 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+---------------COMP_with:V_PASS-N--------------+ | +--------------COMP_with:V-N-------------+ | | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,GENEXXX) COMP_with:V-N (associated,factor) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 438 +--------MOD_ATT:N-N--------+ +-----------------------COMP_with:V_PASS-N----------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:V_PASS-N (recognized,sigma) Parse 439 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) COMP_with:V-N (associated,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 440 +------------------------APPOS-----------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +----COMP_with:V_PASS-N---+ | +-----------------------COMP_with:V_PASS-N----------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (associated,RNA) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (associated,sigma) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,sigma) Parse 441 +--------MOD_ATT:N-N--------+ +-------COMP_with:V_PASS-N------+ +-----------------------COMP_with:V_PASS-N----------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:V_PASS-N (recognized,sigma) Parse 442 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +-----------------------COMP_with:N-N----------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (associated,polymerase) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 443 +--------MOD_ATT:N-N--------+ +------------------------APPOS-----------------------+ +--------------COMP_with:V-N-------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (associated,primary) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V-N (associated,factor) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) Parse 444 +---------------------------SUBJ:V_PASS-N---------------------------+------------------COMP_with:V_PASS-N------------------+ +-----------------------COMP_with:V_PASS-N----------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) COMP_with:V_PASS-N (recognized,sigma) OBJ:V-N (with,factor) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (associated,polymerase) Parse 445 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +------------------COMP_with:N-N------------------+ +----------------------------APPOS----------------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) COMP_with:N-N (RNA,factor) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 446 +--------MOD_ATT:N-N--------+ +------------------COMP_with:V_PASS-N------------------+ +-----------COMP_with:V_PASS-N-----------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) COMP_with:V_PASS-N (recognized,sigma) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 447 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------------COMP_with:V_PASS-N---------------------+ +-----------COMP_with:V-N----------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-ADJ (sigma,primary) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) COMP_with:V-N (associated,sigma) SUBJ:V-N (associated,polymerase) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 448 +---------------------------APPOS---------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ | +-------------------COMP_with:N-N-------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 449 +--------MOD_ATT:N-N--------+ +------------------------APPOS-----------------------+ +--------------COMP_with:V-N-------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_with:N-N (polymerase,factor) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V-N (associated,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) Parse 450 +--------MOD_ATT:N-N--------+ +---------COMP_with:V-N---------+ +----------------------------APPOS----------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) OBJ:V-N (associated,RNA) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 451 +---------------------------SUBJ:V_PASS-N---------------------------+ +--------------------------------APPOS-------------------------------+ +------------------SUBJ:V-N------------------+ | +---------COMP_with:V-N---------+ +-----------------------COMP_with:N-N----------------------+ | +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) APPOS (RNA,GENEXXX) Parse 452 +---------------------------APPOS---------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ | +--------------------------COMP_with:V_PASS-N-------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 453 +---------------------------SUBJ:V_PASS-N---------------------------+ +--------------------------------APPOS-------------------------------+ +------------------SUBJ:V-N------------------+ +---------------COMP_with:V_PASS-N--------------+ | +--------------COMP_with:V-N-------------+ | +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,class) COMP_with:V-N (associated,factor) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) Parse 454 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ +-----------------------COMP_with:N-N----------------------+ | | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (associated,polymerase) Parse 455 +--------MOD_ATT:N-N--------+ +---------------------COMP_with:V_PASS-N---------------------+ +-----------------------COMP_with:V_PASS-N----------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (associated,polymerase) Parse 456 +---------------------------APPOS---------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ | +--------------------------COMP_with:V_PASS-N-------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 457 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +------------------SUBJ:V-N------------------+ | +------------------COMP_with:N-N------------------+ | +-----------COMP_with:V_PASS-N-----------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,factor) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_with:N-N (RNA,factor) SUBJ:V-N (includes,class) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 458 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +---------------COMP_with:N-N--------------+ +-----------------------COMP_with:V_PASS-N----------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_with:N-N (polymerase,factor) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V_PASS-N (recognized,One) Parse 459 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +------------------COMP_with:V_PASS-N------------------+ +-----------------COMP_with:V_PASS-N----------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) COMP_with:V_PASS-N (recognized,sigma) COMP_with:V_PASS-N (recognized,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 460 +----------------------------APPOS----------------------------+ +--------MOD_ATT:N-N--------+ +---------------COMP_with:V_PASS-N--------------+ | +-----------COMP_with:V_PASS-N-----------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,factor) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) APPOS (polymerase,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 461 +--------MOD_ATT:N-N--------+ +------------------------APPOS-----------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,primary) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 462 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ +-----------------------COMP_with:N-N----------------------+ | +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (associated,polymerase) Parse 463 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +------------------SUBJ:V-N------------------+ | +---------------COMP_with:N-N--------------+ | +-----------------------COMP_with:V_PASS-N----------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,sigma) COMP_with:N-N (polymerase,factor) Parse 464 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +----------------------------APPOS----------------------------+ +--------OBJ:V-N--------+ | | +------COMP_with:V-N------+ +-------------------COMP_with:N-N-------------------+ | | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) COMP_with:V-N (associated,sigma) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 465 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------------------------------APPOS-------------------------------+ +--------OBJ:V-N--------+ | | +-------COMP_with:V_PASS-N------+ | +-----------COMP_with:V-N----------+ | | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) COMP_with:V-N (associated,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (recognized,One) Parse 466 +---------------------------SUBJ:V_PASS-N---------------------------+ +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ +------------------COMP_with:V_PASS-N------------------+ +-------------------COMP_with:N-N-------------------+ | +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) COMP_with:V_PASS-N (recognized,sigma) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 467 +--------MOD_ATT:N-N--------+ +------------------------APPOS-----------------------+ +----------------------------APPOS----------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,primary) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 468 +--------MOD_ATT:N-N--------+ +---------------------------APPOS---------------------------+ +-----------------------COMP_with:V_PASS-N----------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+---------COMP_with:V-N---------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,primary) APPOS (RNA,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (associated,polymerase) Parse 469 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +------------------SUBJ:V-N------------------+ | +---------------COMP_with:N-N--------------+ | +--------------------------------APPOS-------------------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) COMP_with:V-N (associated,early-sporulation) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) COMP_with:N-N (polymerase,factor) Parse 470 +---------------------------APPOS---------------------------+ +----------------------------APPOS----------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ | +-------------------COMP_with:N-N-------------------+ | | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 471 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +---------------------------APPOS---------------------------+ +-----------------COMP_with:V_PASS-N----------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) COMP_with:V_PASS-N (recognized,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 472 +----------------------------APPOS----------------------------+ +--------MOD_ATT:N-N--------+ +------------------COMP_with:V_PASS-N------------------+ +-------------------COMP_with:N-N-------------------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) COMP_with:V_PASS-N (recognized,sigma) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 473 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +------------------SUBJ:V-N------------------+ | +------------------COMP_with:N-N------------------+ | +----------------------------APPOS----------------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) COMP_with:N-N (RNA,factor) SUBJ:V-N (includes,class) APPOS (RNA,GENEXXX) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 474 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +---------------------------APPOS---------------------------+ +--------------------------------APPOS-------------------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) COMP_with:V-N (associated,early-sporulation) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) APPOS (RNA,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 475 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ | +------------------COMP_with:N-N------------------+ | +-------------------COMP_with:N-N-------------------+ | +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_with:N-N (RNA,factor) SUBJ:V-N (includes,class) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 476 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +---------------------------APPOS---------------------------+ +--------OBJ:V-N--------+ | | +------------------COMP_with:N-N------------------+ | +----------------------------APPOS----------------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) APPOS (GENEXXX,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,factor) COMP_with:N-N (RNA,factor) APPOS (polymerase,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 477 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +------------------------APPOS-----------------------+ +--------------------------------APPOS-------------------------------+ +--------OBJ:V-N--------+ | | | +-------COMP_with:V_PASS-N------+ | +-----------------------COMP_with:N-N----------------------+ | | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (associated,RNA) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (recognized,One) Parse 478 +---------------------------SUBJ:V_PASS-N---------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) COMP_with:V-N (associated,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 479 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (associated,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,primary) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 480 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ +-------------------COMP_with:N-N-------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 481 +---------------------------SUBJ:V_PASS-N---------------------------+---------------COMP_with:V_PASS-N--------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,factor) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 482 +---------------------------SUBJ:V_PASS-N---------------------------+ +------COMP_with:V-N------+ +-------------------COMP_with:N-N-------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) COMP_with:V-N (associated,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 483 +------------------------APPOS-----------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +----COMP_with:V_PASS-N---+ | | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (associated,RNA) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) COMP_with:V-N (associated,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (associated,sigma) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) Parse 484 +---------------------------SUBJ:V_PASS-N---------------------------+------------------COMP_with:V_PASS-N------------------+ +--------------COMP_with:V-N-------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,factor) APPOS (factor,GENEXXX) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 485 +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ +-----------------------COMP_with:N-N----------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (associated,polymerase) Parse 486 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +-------------------COMP_with:N-N-------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,primary) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 487 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +------------------COMP_with:N-N------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_with:N-N (RNA,factor) SUBJ:V-N (includes,class) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 488 +------------------------APPOS-----------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------COMP_with:N-N--------------+ | | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) COMP_with:V-N (associated,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (polymerase,factor) Parse 489 +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ +-----------COMP_with:V-N----------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (recognized,factor) COMP_with:V-N (associated,sigma) SUBJ:V-N (associated,polymerase) Parse 490 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +------------------COMP_with:V_PASS-N------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) COMP_with:V_PASS-N (recognized,sigma) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 491 +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ +-----------------------COMP_with:N-N----------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (associated,polymerase) Parse 492 +--------MOD_ATT:N-N--------+ +-------COMP_with:V_PASS-N------+ +-----------COMP_with:V-N----------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) COMP_with:V-N (associated,sigma) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) Parse 493 +---------------------------SUBJ:V_PASS-N---------------------------+ +----COMP_with:V_PASS-N---+ +--------------------------------APPOS-------------------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,early-sporulation) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 494 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +---------COMP_with:V-N---------+ | +-----------COMP_with:V-N----------+ | | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) OBJ:V-N (with,factor) COMP_with:V-N (associated,sigma) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V-N (associated,polymerase) APPOS (RNA,GENEXXX) Parse 495 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (associated,primary) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) Parse 496 +---------------------------APPOS---------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +---------COMP_with:V-N---------+ | +-----------------------COMP_with:N-N----------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 497 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +------------------SUBJ:V-N------------------+ | | +----COMP_with:V_PASS-N---+ | +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (associated,RNA) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) COMP_with:V-N (associated,early-sporulation) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) Parse 498 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +------------------------APPOS-----------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) COMP_with:V-N (associated,early-sporulation) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (polymerase,factor) Parse 499 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +-----------------------COMP_with:N-N----------------------+ | | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) COMP_with:N-N (polymerase,factor) Parse 500 +---------------------------APPOS---------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ | +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V-N (associated,factor) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 501 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +------------------COMP_with:N-N------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_with:N-N (RNA,factor) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,class) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 502 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +-------COMP_with:V_PASS-N------+ +-----------------------COMP_with:N-N----------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (recognized,One) Parse 503 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +---------COMP_with:V-N---------+ | +-----------COMP_with:V-N----------+ | +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) COMP_with:V-N (associated,sigma) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V-N (associated,polymerase) APPOS (RNA,GENEXXX) Parse 504 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +---------------------COMP_with:V_PASS-N---------------------+ +-----------------------COMP_with:N-N----------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (associated,polymerase) Parse 505 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------COMP_with:V_PASS-N--------------+ +--------COMP_with:V_PASS-N--------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (recognized,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_with:V_PASS-N (associated,sigma) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 506 +--------MOD_ATT:N-N--------+ +-------COMP_with:V_PASS-N------+ +-----------------------COMP_with:V_PASS-N----------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_with:V_PASS-N (recognized,sigma) Parse 507 +--------MOD_ATT:N-N--------+ +---------------------COMP_with:V_PASS-N---------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 508 +------------------------APPOS-----------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +----COMP_with:V_PASS-N---+ | +-----------------------COMP_with:V_PASS-N----------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (associated,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:V_PASS-N (recognized,sigma) Parse 509 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +---------------COMP_with:V_PASS-N--------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_with:V_PASS-N (recognized,factor) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 510 +--------MOD_ATT:N-N--------+ +----COMP_with:V_PASS-N---+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_with:V_PASS-N (associated,sigma) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 511 +----------------------------APPOS----------------------------+ +--------MOD_ATT:N-N--------+ | +-----------COMP_with:V_PASS-N-----------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,early-sporulation) COMP_with:V-N (associated,primary) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,factor) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) APPOS (polymerase,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 512 +--------MOD_ATT:N-N--------+ +------------------COMP_with:V_PASS-N------------------+ +-----------COMP_with:V_PASS-N-----------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) COMP_with:V_PASS-N (recognized,sigma) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 513 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +------------------SUBJ:V-N------------------+ | +------------------COMP_with:N-N------------------+ | +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V-N (associated,factor) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V-N (includes,class) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 514 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ | +-----------COMP_with:V-N----------+ | | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) OBJ:V-N (with,factor) COMP_with:V-N (associated,sigma) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (associated,polymerase) Parse 515 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------------COMP_with:V_PASS-N---------------------+ +--------COMP_with:V_PASS-N--------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-ADJ (sigma,primary) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_with:V_PASS-N (associated,sigma) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 516 +---------------------------APPOS---------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ | +--------------------------COMP_with:V_PASS-N-------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 517 +--------MOD_ATT:N-N--------+ +---------COMP_with:V-N---------+ +--------------------------------APPOS-------------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (associated,factor) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 518 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------------COMP_with:V_PASS-N---------------------+ +-----------COMP_with:V-N----------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,primary) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) COMP_with:V-N (associated,sigma) SUBJ:V-N (associated,polymerase) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (recognized,One) Parse 519 +--------MOD_ATT:N-N--------+ +---------------------COMP_with:V_PASS-N---------------------+ +-----------------COMP_with:V_PASS-N----------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V_PASS-N (recognized,early-sporulation) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 520 +---------------------------SUBJ:V_PASS-N---------------------------+ +--------------------------------APPOS-------------------------------+ +------------------SUBJ:V-N------------------+ | +---------COMP_with:V-N---------+ +-----------------------COMP_with:N-N----------------------+ | +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) APPOS (RNA,GENEXXX) Parse 521 +----------------------------APPOS----------------------------+ +--------MOD_ATT:N-N--------+ +---------------COMP_with:N-N--------------+ | +--------COMP_with:V_PASS-N--------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . COMP_with:V_PASS-N (associated,sigma) SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) COMP_with:N-N (polymerase,factor) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 522 +---------------------------APPOS---------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ | +--------------------------COMP_with:V_PASS-N-------------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,class) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 523 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------------COMP_with:V_PASS-N---------------------+ +-----------------COMP_with:V_PASS-N----------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) COMP_with:V_PASS-N (recognized,early-sporulation) COMP_with:V_PASS-N (recognized,factor) SUBJ:V_PASS-N (recognized,One) Parse 524 +--------MOD_ATT:N-N--------+ +---------------------COMP_with:V_PASS-N---------------------+ +-----------------------COMP_with:V_PASS-N----------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V_PASS-N (recognized,promoter) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,primary) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (sigma,early-sporulation) COMP_with:V_PASS-N (recognized,sigma) Parse 525 +--------------------------------APPOS-------------------------------+ +--------MOD_ATT:N-N--------+ +---------COMP_with:V-N---------+ | +--------------COMP_with:V-N-------------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) OBJ:V-N (associated,RNA) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (associated,factor) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 526 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +------------------------APPOS-----------------------+ +-----------------------COMP_with:V_PASS-N----------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,sigma) COMP_with:N-N (polymerase,factor) Parse 527 +---------------------------APPOS---------------------------+ +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ | | +--------------COMP_with:V-N-------------+ | | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) COMP_with:V-N (associated,factor) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 528 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +---------------------------APPOS---------------------------+ +--------OBJ:V-N--------+ | | | +------COMP_with:V-N------+ | +-----------COMP_with:V_PASS-N-----------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,sigma) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 529 +--------MOD_ATT:N-N--------+ +------------------COMP_with:V_PASS-N------------------+ +----------------------------APPOS----------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,factor) OBJ:V-N (with,factor) COMP_with:V_PASS-N (recognized,sigma) MOD_ATT:N-N (promoter,GENEXXX) APPOS (polymerase,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 530 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +------------------SUBJ:V-N------------------+ | +------------------COMP_with:N-N------------------+ | +--------------------------COMP_with:V_PASS-N-------------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 531 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +----------------------------APPOS----------------------------+ +--------OBJ:V-N--------+ | +---------------COMP_with:V_PASS-N--------------+ | +--------COMP_with:V_PASS-N--------+ | | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . COMP_with:V_PASS-N (associated,sigma) SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (recognized,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 532 +------------------------APPOS-----------------------+ +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +-------COMP_with:V_PASS-N------+ | +-----------------------COMP_with:N-N----------------------+ | +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) Parse 533 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------COMP_with:V_PASS-N--------------+ +----------------------------APPOS----------------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (recognized,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 534 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +--------------------------------APPOS-------------------------------+ +------------------SUBJ:V-N------------------+ | | +----COMP_with:V_PASS-N---+ | | +-----------COMP_with:V-N----------+ | +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (associated,RNA) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (polymerase,RNA) COMP_with:V-N (associated,sigma) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) Parse 535 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------------------------------APPOS-------------------------------+ +--------OBJ:V-N--------+ | +---------------COMP_with:V_PASS-N--------------+ | +--------------COMP_with:V-N-------------+ | | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (recognized,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) COMP_with:V-N (associated,factor) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 536 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +------------------COMP_with:V_PASS-N------------------+ +----------------------------APPOS----------------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) APPOS (GENEXXX,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,factor) OBJ:V-N (with,factor) COMP_with:V_PASS-N (recognized,sigma) APPOS (polymerase,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 537 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +------------------------APPOS-----------------------+ +-----------------------COMP_with:V_PASS-N----------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-ADJ (sigma,primary) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_with:N-N (polymerase,factor) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,early-sporulation) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V_PASS-N (recognized,One) Parse 538 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------------------------------APPOS-------------------------------+ +--------OBJ:V-N--------+ | +---------------------COMP_with:V_PASS-N---------------------+ | +-----------COMP_with:V-N----------+ | | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V-N (associated,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-ADJ (sigma,primary) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (recognized,One) Parse 539 +--------MOD_ATT:N-N--------+ +---------------------------APPOS---------------------------+ +----------------------------APPOS----------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+---------COMP_with:V-N---------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 540 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) COMP_with:V-N (associated,primary) COMP_with:V_PASS-N (associated,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 541 +---------------------------SUBJ:V_PASS-N---------------------------+ +-------------------COMP_with:N-N-------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,primary) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 542 +---------------------------SUBJ:V_PASS-N---------------------------+ +--------------COMP_with:V-N-------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V-N (associated,factor) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) COMP_with:V-N (associated,primary) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 543 +---------------------------SUBJ:V_PASS-N---------------------------+ +-----------------------COMP_with:N-N----------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (associated,primary) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 544 +---------------------------SUBJ:V_PASS-N---------------------------+ +-----------------------COMP_with:N-N----------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 545 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +--------------COMP_with:V-N-------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V-N (associated,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (associated,primary) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) Parse 546 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +-----------------------COMP_with:N-N----------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (associated,primary) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 547 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +---------------COMP_with:V_PASS-N--------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) COMP_with:V-N (associated,early-sporulation) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 548 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +-----------------------COMP_with:N-N----------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 549 +---------------------------SUBJ:V_PASS-N---------------------------+------------------COMP_with:V_PASS-N------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) COMP_with:V_PASS-N (recognized,sigma) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 550 +---------------------------SUBJ:V_PASS-N---------------------------+------------------COMP_with:V_PASS-N------------------+ +-----------------------COMP_with:N-N----------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (sigma,primary) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) Parse 551 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +-----------------------COMP_with:N-N----------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 552 +---------------------------SUBJ:V_PASS-N---------------------------+---------------COMP_with:V_PASS-N--------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 553 +---------------------------SUBJ:V_PASS-N---------------------------+ +--------------------------------APPOS-------------------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,early-sporulation) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (associated,primary) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 554 +--------MOD_ATT:N-N--------+ +-----------COMP_with:V-N----------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_with:N-N (polymerase,factor) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) COMP_with:V-N (associated,sigma) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) Parse 555 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,factor) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) COMP_with:V-N (associated,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 556 +--------MOD_ATT:N-N--------+ +---------COMP_with:V-N---------+ +--------COMP_with:V_PASS-N--------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 557 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +----COMP_with:V_PASS-N---+ +-----------------COMP_with:V_PASS-N----------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) COMP_with:V_PASS-N (recognized,early-sporulation) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 558 +---------------------------SUBJ:V_PASS-N---------------------------+---------------COMP_with:V_PASS-N--------------+ +-----------------COMP_with:V_PASS-N----------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) COMP_with:V_PASS-N (recognized,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 559 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +----------------------------APPOS----------------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (associated,early-sporulation) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_with:V_PASS-N (associated,primary) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (with,factor) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 560 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +---------------------------APPOS---------------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) COMP_with:V-N (associated,primary) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 561 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 562 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +----------------------------APPOS----------------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) COMP_with:V-N (associated,primary) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 563 +--------MOD_ATT:N-N--------+ +---------------COMP_with:V_PASS-N--------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 564 +--------MOD_ATT:N-N--------+ +------------------COMP_with:V_PASS-N------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V-N (associated,factor) OBJ:V-N (with,factor) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 565 +--------MOD_ATT:N-N--------+ +------------------------APPOS-----------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_with:V_PASS-N (associated,primary) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 566 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) COMP_with:V_PASS-N (associated,early-sporulation) MOD_ATT:N-N (factor,sigma) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,primary) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (with,factor) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 567 +--------MOD_ATT:N-N--------+ +------------------COMP_with:V_PASS-N------------------+ +-----------COMP_with:V_PASS-N-----------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) COMP_with:V_PASS-N (recognized,sigma) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 568 +--------MOD_ATT:N-N--------+ +---------------------------APPOS---------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+---------COMP_with:V-N---------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,early-sporulation) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,primary) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 569 +---------------------------SUBJ:V_PASS-N---------------------------+------------------COMP_with:V_PASS-N------------------+ +-----------------------COMP_with:V_PASS-N----------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) COMP_with:V_PASS-N (recognized,sigma) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (associated,polymerase) Parse 570 +---------------------------APPOS---------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ | +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V-N (associated,factor) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 571 +---------------------------APPOS---------------------------+ +--------MOD_ATT:N-N--------+ | +---------COMP_with:V-N---------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,early-sporulation) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 572 +------------------------APPOS-----------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +----COMP_with:V_PASS-N---+ | +--------------------------------APPOS-------------------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (associated,RNA) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_with:V-N (associated,early-sporulation) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (associated,sigma) OBJ:V-N (with,factor) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) Parse 573 +--------MOD_ATT:N-N--------+ +------------------COMP_with:N-N------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 574 +----------------------------APPOS----------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +-------------------COMP_with:N-N-------------------+ | | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,primary) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 575 +--------MOD_ATT:N-N--------+ +------------------COMP_with:V_PASS-N------------------+ +-------------------COMP_with:N-N-------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) MOD_ATT:N-N (polymerase,RNA) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) COMP_with:V_PASS-N (recognized,sigma) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 576 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+------------------COMP_with:V_PASS-N------------------+ +-----------------------COMP_with:N-N----------------------+ | | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) Parse 577 +----------------------------APPOS----------------------------+ +--------MOD_ATT:N-N--------+ +---------COMP_with:V-N---------+ | +--------COMP_with:V_PASS-N--------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . COMP_with:V_PASS-N (associated,sigma) SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) OBJ:V-N (associated,RNA) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) APPOS (polymerase,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 578 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +------COMP_with:V-N------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,sigma) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 579 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------COMP_with:V_PASS-N--------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (recognized,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) OBJ:V-N (with,factor) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 580 +---------------------------SUBJ:V_PASS-N---------------------------+ +--------------------------------APPOS-------------------------------+ +------------------SUBJ:V-N------------------+ +---------------COMP_with:V_PASS-N--------------+ +-----------------------COMP_with:N-N----------------------+ | +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) Parse 581 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +---------------------------APPOS---------------------------+ +-------------------COMP_with:N-N-------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) COMP_with:V-N (associated,primary) MOD_ATT:N-N (factor,sigma) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 582 +--------MOD_ATT:N-N--------+ +---------------------------APPOS---------------------------+ +-----------------COMP_with:V_PASS-N----------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+---------COMP_with:V-N---------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V_PASS-N (recognized,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 583 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +---------------COMP_with:N-N--------------+ +--------------------------------APPOS-------------------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) COMP_with:V-N (associated,early-sporulation) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) COMP_with:N-N (polymerase,factor) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (recognized,One) Parse 584 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +------------------------APPOS-----------------------+ +--------OBJ:V-N--------+ | | | +----COMP_with:V_PASS-N---+ | +--------COMP_with:V_PASS-N--------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_with:V_PASS-N (associated,sigma) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 585 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------------------------------APPOS-------------------------------+ +--------OBJ:V-N--------+ | | +----COMP_with:V_PASS-N---+ | +-----------COMP_with:V-N----------+ | | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V-N (associated,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (recognized,One) Parse 586 +--------------------------------APPOS-------------------------------+ +--------MOD_ATT:N-N--------+ +-------COMP_with:V_PASS-N------+ +-----------------------COMP_with:N-N----------------------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) SUBJ:V-N (associated,polymerase) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) OBJ:V-N (associated,RNA) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) APPOS (RNA,GENEXXX) Parse 587 +---------------------------APPOS---------------------------+ +--------MOD_ATT:N-N--------+ +------------------COMP_with:N-N------------------+ | +-----------COMP_with:V_PASS-N-----------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) APPOS (RNA,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 588 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +-----------------------COMP_with:N-N----------------------+ | | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 589 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +---------------------------APPOS---------------------------+ +--------OBJ:V-N--------+ | | | +---------COMP_with:V-N---------+ | +-----------------------COMP_with:N-N----------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 590 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +-----------------------COMP_with:N-N----------------------+ | +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) APPOS (RNA,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 591 +---------------------------SUBJ:V_PASS-N---------------------------+ +--------------------------------APPOS-------------------------------+ +------------------SUBJ:V-N------------------+ +---------------------COMP_with:V_PASS-N---------------------+ +-----------------------COMP_with:N-N----------------------+ | +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (associated,polymerase) Parse 592 +------------------------APPOS-----------------------+ +--------MOD_ATT:N-N--------+ | +----COMP_with:V_PASS-N---+ | +--------------------------COMP_with:V_PASS-N-------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_with:V_PASS-N (associated,sigma) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) Parse 593 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +------------------SUBJ:V-N------------------+ | | +------COMP_with:V-N------+ | +--------------------------------APPOS-------------------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,sigma) COMP_with:V-N (associated,early-sporulation) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) APPOS (RNA,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 594 +------------------------APPOS-----------------------+ +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +----COMP_with:V_PASS-N---+ | +-----------------------COMP_with:N-N----------------------+ | +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (associated,RNA) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) Parse 595 +------------------------APPOS-----------------------+ +----------------------------APPOS----------------------------+ +--------MOD_ATT:N-N--------+ | +----COMP_with:V_PASS-N---+ | | +--------COMP_with:V_PASS-N--------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . COMP_with:V_PASS-N (associated,sigma) SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 596 +------------------------APPOS-----------------------+ +--------MOD_ATT:N-N--------+ +---------------COMP_with:N-N--------------+ | +--------------------------------APPOS-------------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) COMP_with:V-N (associated,early-sporulation) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) COMP_with:N-N (polymerase,factor) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) APPOS (RNA,GENEXXX) Parse 597 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +------------------SUBJ:V-N------------------+ | +------------------COMP_with:N-N------------------+ | +--------------------------------APPOS-------------------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V-N (includes,class) COMP_with:V-N (associated,factor) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 598 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +---------------------------APPOS---------------------------+ +-----------------------COMP_with:V_PASS-N----------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,primary) APPOS (RNA,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 599 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------------------------------APPOS-------------------------------+ +--------OBJ:V-N--------+ | +---------------------COMP_with:V_PASS-N---------------------+ +-----------------------COMP_with:N-N----------------------+ | | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (associated,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (associated,RNA) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 600 +------------------------APPOS-----------------------+ +--------------------------------APPOS-------------------------------+ +--------MOD_ATT:N-N--------+ | +-------COMP_with:V_PASS-N------+ | | +-----------COMP_with:V-N----------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ | +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_with:V-N (associated,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) Parse 601 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +---------------------------APPOS---------------------------+ +--------------------------------APPOS-------------------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) COMP_with:V-N (associated,primary) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) COMP_with:V-N (associated,factor) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 602 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +---------------------------APPOS---------------------------+ +--------OBJ:V-N--------+ | | +------------------COMP_with:N-N------------------+ | +--------------------------COMP_with:V_PASS-N-------------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_with:N-N (RNA,factor) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 603 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +------------------------APPOS-----------------------+ +--------OBJ:V-N--------+ | | +---------------COMP_with:N-N--------------+ | +--------------------------------APPOS-------------------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) COMP_with:V-N (associated,early-sporulation) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) COMP_with:N-N (polymerase,factor) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (recognized,One) Parse 604 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +---------------------------APPOS---------------------------+ +--------OBJ:V-N--------+ | | +------------------COMP_with:N-N------------------+ | +--------------------------COMP_with:V_PASS-N-------------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 605 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------------------------------APPOS-------------------------------+ +--------OBJ:V-N--------+ | | +---------------------------APPOS---------------------------+ | +-----------COMP_with:V-N----------+ | | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V-N (associated,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) APPOS (RNA,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 606 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +---------------------------APPOS---------------------------+ +----------------------------APPOS----------------------------+ +--------OBJ:V-N--------+ | | | +------COMP_with:V-N------+ | +-------------------COMP_with:N-N-------------------+ | | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) COMP_with:V-N (associated,sigma) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 607 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +---------------------------APPOS---------------------------+ +--------OBJ:V-N--------+ | | +------------------COMP_with:N-N------------------+ | +----------------------------APPOS----------------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (sigma,primary) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) APPOS (RNA,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 608 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +---------------------------APPOS---------------------------+ +--------------------------------APPOS-------------------------------+ +--------OBJ:V-N--------+ | | | +------COMP_with:V-N------+ | | +--------------COMP_with:V-N-------------+ | | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,sigma) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) COMP_with:V-N (associated,factor) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 609 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +---------------------------APPOS---------------------------+ +----------------------------APPOS----------------------------+ +--------OBJ:V-N--------+ | | +------------------COMP_with:N-N------------------+ | | +-----------COMP_with:V_PASS-N-----------+ | | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,factor) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (sigma,primary) APPOS (polymerase,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 610 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +---------------------------APPOS---------------------------+ +--------------------------------APPOS-------------------------------+ +--------OBJ:V-N--------+ | | | +---------COMP_with:V-N---------+ | +-----------------------COMP_with:N-N----------------------+ | | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (associated,RNA) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 611 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) COMP_with:V_PASS-N (associated,primary) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) Parse 612 +---------------------------SUBJ:V_PASS-N---------------------------+ +------COMP_with:V-N------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) COMP_with:V-N (associated,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 613 +---------------------------SUBJ:V_PASS-N---------------------------+---------------COMP_with:V_PASS-N--------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,factor) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 614 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ +-------------------COMP_with:N-N-------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 615 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 616 +----------------------------APPOS----------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +--------COMP_with:V_PASS-N--------+ | | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) COMP_with:V-N (associated,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) SUBJ:V_PASS-N (activated,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 617 +---------------------------SUBJ:V_PASS-N---------------------------+---------------------COMP_with:V_PASS-N---------------------+ +-----------------------COMP_with:N-N----------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (associated,polymerase) Parse 618 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ +--------------COMP_with:V-N-------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,factor) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 619 +---------------------------SUBJ:V_PASS-N---------------------------+------------------COMP_with:V_PASS-N------------------+ +-----------------------COMP_with:N-N----------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) Parse 620 +---------------------------APPOS---------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +------COMP_with:V-N------+ | | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) COMP_with:V-N (associated,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 621 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +--------------COMP_with:V-N-------------+ | | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (associated,primary) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) COMP_with:V-N (associated,factor) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 622 +---------------------------SUBJ:V_PASS-N---------------------------+ +------COMP_with:V-N------+ +--------------------------------APPOS-------------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,sigma) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,early-sporulation) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) APPOS (RNA,GENEXXX) Parse 623 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ +-----------------COMP_with:V_PASS-N----------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (factor,sigma) COMP_with:V_PASS-N (recognized,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 624 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +-----------COMP_with:V_PASS-N-----------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) SUBJ:V-N (activated,class) COMP_with:V-N (associated,primary) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 625 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,primary) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 626 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) SUBJ:V-N (includes,class) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 627 +---------------------------SUBJ:V_PASS-N---------------------------+---------------COMP_with:V_PASS-N--------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 628 +--------MOD_ATT:N-N--------+ +---------------------COMP_with:V_PASS-N---------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,early-sporulation) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 629 +--------MOD_ATT:N-N--------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,primary) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 630 +---------------------------SUBJ:V_PASS-N---------------------------+------------------COMP_with:V_PASS-N------------------+ +-----------------COMP_with:V_PASS-N----------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) COMP_with:V_PASS-N (recognized,sigma) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) COMP_with:V_PASS-N (recognized,early-sporulation) OBJ:V-N (includes,GENEXXX) Parse 631 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) OBJ:V-N (associated,RNA) COMP_with:V_PASS-N (associated,early-sporulation) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 632 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +---------------COMP_with:V_PASS-N--------------+ +-----------------COMP_with:V_PASS-N----------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) COMP_with:V_PASS-N (recognized,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 633 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +------------------COMP_with:V_PASS-N------------------+ +-----------------------COMP_with:N-N----------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) COMP_with:V_PASS-N (recognized,sigma) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) Parse 634 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +----COMP_with:V_PASS-N---+ | +-----------COMP_with:V-N----------+ | +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (polymerase,RNA) COMP_with:V-N (associated,sigma) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 635 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +----------------------------APPOS----------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) COMP_with:V_PASS-N (associated,early-sporulation) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) COMP_with:V-N (associated,primary) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 636 +---------------------------SUBJ:V_PASS-N---------------------------+ +--------------------------------APPOS-------------------------------+ +------------------SUBJ:V-N------------------+ | | +--------------COMP_with:V-N-------------+ | +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (associated,primary) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) COMP_with:V-N (associated,factor) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 637 +--------MOD_ATT:N-N--------+ +---------------------COMP_with:V_PASS-N---------------------+ +-----------COMP_with:V-N----------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) COMP_with:V-N (associated,sigma) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (sigma,early-sporulation) Parse 638 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +------------------COMP_with:N-N------------------+ +-----------COMP_with:V_PASS-N-----------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 639 +--------MOD_ATT:N-N--------+ +---------------------COMP_with:V_PASS-N---------------------+ +-----------------COMP_with:V_PASS-N----------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V_PASS-N (recognized,early-sporulation) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 640 +--------MOD_ATT:N-N--------+ +---------------COMP_with:V_PASS-N--------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 641 +------------------------APPOS-----------------------+ +--------MOD_ATT:N-N--------+ | +----COMP_with:V_PASS-N---+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) MOD_ATT:N-N (sigma,primary) COMP_with:V-N (associated,factor) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (promoter,GENEXXX) Parse 642 +--------MOD_ATT:N-N--------+ +---------------COMP_with:N-N--------------+ +----------------------------APPOS----------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) COMP_with:N-N (polymerase,factor) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) MOD_ATT:N-N (promoter,GENEXXX) APPOS (polymerase,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 643 +---------------------------APPOS---------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ | +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 644 +----------------------------APPOS----------------------------+ +--------MOD_ATT:N-N--------+ +------COMP_with:V-N------+ | +-----------COMP_with:V_PASS-N-----------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,early-sporulation) COMP_with:V-N (associated,sigma) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,factor) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) APPOS (polymerase,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 645 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +------------------COMP_with:V_PASS-N------------------+ +--------COMP_with:V_PASS-N--------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-ADJ (sigma,primary) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_with:V_PASS-N (associated,sigma) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (with,factor) COMP_with:V_PASS-N (recognized,sigma) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 646 +--------MOD_ATT:N-N--------+ +---------------------COMP_with:V_PASS-N---------------------+ +-----------------COMP_with:V_PASS-N----------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V_PASS-N (recognized,early-sporulation) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 647 +---------------------------APPOS---------------------------+ +--------MOD_ATT:N-N--------+ +------------------COMP_with:N-N------------------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-----------COMP_with:V_PASS-N-----------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) APPOS (RNA,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 648 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ | +--------------COMP_with:V-N-------------+ | +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (associated,primary) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) COMP_with:V-N (associated,factor) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) Parse 649 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +----------------------------APPOS----------------------------+ +--------OBJ:V-N--------+ | | +-------------------COMP_with:N-N-------------------+ | | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_with:V_PASS-N (associated,primary) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 650 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +------------------COMP_with:N-N------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (sigma,primary) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 651 +--------------------------------APPOS-------------------------------+ +--------MOD_ATT:N-N--------+ +----COMP_with:V_PASS-N---+ | +--------------COMP_with:V-N-------------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (associated,factor) APPOS (RNA,GENEXXX) Parse 652 +---------------------------APPOS---------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +------COMP_with:V-N------+ | +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) COMP_with:V_PASS-N (associated,early-sporulation) COMP_with:V-N (associated,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 653 +---------------------------SUBJ:V_PASS-N---------------------------+ +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ +---------------COMP_with:V_PASS-N--------------+ +-------------------COMP_with:N-N-------------------+ | +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 654 +--------MOD_ATT:N-N--------+ +---------------------COMP_with:V_PASS-N---------------------+ +-----------------------COMP_with:V_PASS-N----------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (sigma,early-sporulation) COMP_with:V_PASS-N (recognized,sigma) Parse 655 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ | +--------------COMP_with:V-N-------------+ | +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) COMP_with:V-N (associated,primary) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) COMP_with:V-N (associated,factor) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 656 +--------------------------------APPOS-------------------------------+ +--------MOD_ATT:N-N--------+ +---------------COMP_with:V_PASS-N--------------+ | +--------------COMP_with:V-N-------------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (associated,factor) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 657 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +---------------------------APPOS---------------------------+ +--------OBJ:V-N--------+ | | | +------COMP_with:V-N------+ | | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,sigma) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 658 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +------------------SUBJ:V-N------------------+ | | +------COMP_with:V-N------+ | +-----------------------COMP_with:V_PASS-N----------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (associated,polymerase) Parse 659 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +------------------------APPOS-----------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) MOD_ATT:N-N (sigma,early-sporulation) COMP_with:V_PASS-N (associated,primary) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) OBJ:V-N (with,factor) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 660 +--------MOD_ATT:N-N--------+ +------------------------APPOS-----------------------+ +--------------------------------APPOS-------------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) COMP_with:V-N (associated,early-sporulation) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) COMP_with:N-N (polymerase,factor) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) APPOS (RNA,GENEXXX) Parse 661 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +---------------------------APPOS---------------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) COMP_with:V-N (associated,primary) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 662 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------------COMP_with:V_PASS-N---------------------+ +--------------------------------APPOS-------------------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,early-sporulation) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 663 +---------------------------APPOS---------------------------+ +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ | | +--------------COMP_with:V-N-------------+ | +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) COMP_with:V-N (associated,factor) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 664 +--------------------------------APPOS-------------------------------+ +--------MOD_ATT:N-N--------+ +---------------------COMP_with:V_PASS-N---------------------+ | +-----------COMP_with:V-N----------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V-N (associated,sigma) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 665 +---------------------------SUBJ:V_PASS-N---------------------------+ +--------------------------------APPOS-------------------------------+ +------------------SUBJ:V-N------------------+ | +------------------------APPOS-----------------------+ +-----------------------COMP_with:N-N----------------------+ | +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (associated,primary) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) Parse 666 +---------------------------APPOS---------------------------+ +----------------------------APPOS----------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ | +-------------------COMP_with:N-N-------------------+ | +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 667 +------------------------APPOS-----------------------+ +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------COMP_with:N-N--------------+ | +-----------------------COMP_with:N-N----------------------+ | +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) COMP_with:N-N (polymerase,factor) Parse 668 +------------------------APPOS-----------------------+ +----------------------------APPOS----------------------------+ +--------MOD_ATT:N-N--------+ +---------------COMP_with:N-N--------------+ | | +--------COMP_with:V_PASS-N--------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . COMP_with:V_PASS-N (associated,sigma) SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) COMP_with:N-N (polymerase,factor) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 669 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +---------------------------APPOS---------------------------+ +--------OBJ:V-N--------+ | | | +------COMP_with:V-N------+ | +--------------------------COMP_with:V_PASS-N-------------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,sigma) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 670 +---------------------------APPOS---------------------------+ +--------------------------------APPOS-------------------------------+ +--------MOD_ATT:N-N--------+ | +------COMP_with:V-N------+ | | +--------------COMP_with:V-N-------------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,sigma) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (associated,factor) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 671 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------------------------------APPOS-------------------------------+ +--------OBJ:V-N--------+ | | +------------------------APPOS-----------------------+ +-----------------------COMP_with:N-N----------------------+ | | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +-------COMP_with:V_PASS-N------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (associated,RNA) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (recognized,One) Parse 672 +---------------------------SUBJ:V_PASS-N---------------------------+ +-----------COMP_with:V-N----------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) COMP_with:V-N (associated,primary) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) COMP_with:V-N (associated,sigma) Parse 673 +---------------------------SUBJ:V_PASS-N---------------------------+---------------COMP_with:V_PASS-N--------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) COMP_with:V-N (associated,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 674 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) COMP_with:V-N (associated,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 675 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ +-----------COMP_with:V-N----------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V-N (associated,sigma) SUBJ:V-N (associated,polymerase) Parse 676 +---------------------------SUBJ:V_PASS-N---------------------------+ +------COMP_with:V-N------+ +-----------------COMP_with:V_PASS-N----------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) COMP_with:V_PASS-N (recognized,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 677 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ +-----------COMP_with:V-N----------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V-N (associated,sigma) SUBJ:V-N (associated,polymerase) Parse 678 +---------------------------SUBJ:V_PASS-N---------------------------+---------------COMP_with:V_PASS-N--------------+ +--------COMP_with:V_PASS-N--------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 679 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +--------------COMP_with:V-N-------------+ | | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) COMP_with:V-N (associated,primary) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) COMP_with:V-N (associated,factor) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) APPOS (RNA,GENEXXX) Parse 680 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +-----------------------COMP_with:N-N----------------------+ | | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (associated,primary) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 681 +--------MOD_ATT:N-N--------+ +------COMP_with:V-N------+ +-------------------COMP_with:N-N-------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) COMP_with:V-N (associated,sigma) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 682 +--------MOD_ATT:N-N--------+ +----COMP_with:V_PASS-N---+ +-----------------COMP_with:V_PASS-N----------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) OBJ:V-N (with,factor) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V_PASS-N (recognized,early-sporulation) Parse 683 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +------COMP_with:V-N------+ +-----------COMP_with:V-N----------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,sigma) SUBJ:V-N (activated,class) MOD_ATT:N-ADJ (sigma,primary) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) COMP_with:V-N (associated,sigma) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 684 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +------------------COMP_with:N-N------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) COMP_with:V-N (associated,factor) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 685 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +--------------------------COMP_with:V_PASS-N-------------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) COMP_with:V-N (associated,primary) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) OBJ:V-N (with,factor) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 686 +---------------------------SUBJ:V_PASS-N---------------------------+---------------COMP_with:V_PASS-N--------------+ +--------------------------------APPOS-------------------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,early-sporulation) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 687 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------COMP_with:V-N------+ +-----------------------COMP_with:N-N----------------------+ | +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) APPOS (RNA,GENEXXX) Parse 688 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +--------------------------COMP_with:V_PASS-N-------------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) COMP_with:V-N (associated,primary) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 689 +----------------------------APPOS----------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ | +--------COMP_with:V_PASS-N--------+ | +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) COMP_with:V_PASS-N (associated,sigma) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 690 +---------------------------APPOS---------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ | +--------COMP_with:V_PASS-N--------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) MOD_ATT:N-N (sigma,early-sporulation) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) APPOS (RNA,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 691 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ | +-----------COMP_with:V-N----------+ | +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) COMP_with:V-N (associated,sigma) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 692 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +------------------------APPOS-----------------------+ +-----------------COMP_with:V_PASS-N----------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (associated,primary) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) COMP_with:V_PASS-N (recognized,early-sporulation) OBJ:V-N (includes,GENEXXX) Parse 693 +--------MOD_ATT:N-N--------+ +---------------------------APPOS---------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,primary) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V-N (associated,factor) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 694 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +----COMP_with:V_PASS-N---+ +-----------------------COMP_with:N-N----------------------+ | +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 695 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------------APPOS-----------------------+ +------------------SUBJ:V-N------------------+ | | +----COMP_with:V_PASS-N---+ | +-----------------------COMP_with:N-N----------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (polymerase,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) Parse 696 +--------MOD_ATT:N-N--------+ +------------------COMP_with:N-N------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 697 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +-----------------------COMP_with:V_PASS-N----------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) COMP_with:V-N (associated,primary) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) APPOS (RNA,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (associated,polymerase) Parse 698 +--------MOD_ATT:N-N--------+ +------------------COMP_with:V_PASS-N------------------+ +-----------------COMP_with:V_PASS-N----------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (with,factor) COMP_with:V_PASS-N (recognized,sigma) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V_PASS-N (recognized,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 699 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +------------------------APPOS-----------------------+ +--------COMP_with:V_PASS-N--------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_with:V_PASS-N (associated,primary) COMP_with:V_PASS-N (associated,sigma) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 700 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +------------------------APPOS-----------------------+ +-----------------------COMP_with:N-N----------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (associated,primary) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V_PASS-N (recognized,One) Parse 701 +--------MOD_ATT:N-N--------+ +------------------COMP_with:V_PASS-N------------------+ +----------------------------APPOS----------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) OBJ:V-N (with,factor) COMP_with:V_PASS-N (recognized,sigma) MOD_ATT:N-N (promoter,GENEXXX) APPOS (polymerase,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 702 +---------------------------APPOS---------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ | +----------------------------APPOS----------------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 703 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +----------------------------APPOS----------------------------+ +--------OBJ:V-N--------+ | | +------------------COMP_with:N-N------------------+ | +--------COMP_with:V_PASS-N--------+ | | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . COMP_with:V_PASS-N (associated,sigma) SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (sigma,primary) APPOS (polymerase,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 704 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +------------------SUBJ:V-N------------------+ | +------------------COMP_with:N-N------------------+ | +-----------------COMP_with:V_PASS-N----------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V-N (includes,class) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) COMP_with:V_PASS-N (recognized,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 705 +---------------------------APPOS---------------------------+ +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ | | +-----------COMP_with:V-N----------+ | | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) OBJ:V-N (with,factor) COMP_with:V-N (associated,sigma) SUBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 706 +---------------------------SUBJ:V_PASS-N---------------------------+ +--------------------------------APPOS-------------------------------+ +------------------SUBJ:V-N------------------+ +------------------COMP_with:V_PASS-N------------------+ | +-----------COMP_with:V-N----------+ | +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) COMP_with:V-N (associated,sigma) COMP_with:V_PASS-N (recognized,sigma) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 707 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +------------------COMP_with:N-N------------------+ +----------------------------APPOS----------------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (sigma,primary) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 708 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +-----------------------COMP_with:N-N----------------------+ | +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) COMP_with:V-N (associated,primary) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 709 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +------------------SUBJ:V-N------------------+ | +------------------COMP_with:N-N------------------+ | +-----------------------COMP_with:V_PASS-N----------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (associated,polymerase) Parse 710 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------------------------------APPOS-------------------------------+ +--------OBJ:V-N--------+ | | +-----------------------COMP_with:N-N----------------------+ | | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) SUBJ:V-N (associated,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (associated,RNA) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 711 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +---------------------------APPOS---------------------------+ +--------OBJ:V-N--------+ | | +------------------COMP_with:N-N------------------+ | +--------------COMP_with:V-N-------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) COMP_with:V-N (associated,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 712 +---------------------------APPOS---------------------------+ +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +------COMP_with:V-N------+ | +-----------------------COMP_with:N-N----------------------+ | | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 713 +--------MOD_ATT:N-N--------+ +---------------------------APPOS---------------------------+ +--------------------------------APPOS-------------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+--------------COMP_with:V-N-------------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,primary) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (associated,factor) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 714 +--------------------------------APPOS-------------------------------+ +--------MOD_ATT:N-N--------+ +---------------------COMP_with:V_PASS-N---------------------+ +-----------------------COMP_with:N-N----------------------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (associated,polymerase) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) OBJ:V-N (includes,GENEXXX) OBJ:V-N (associated,RNA) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 715 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +---------------------------APPOS---------------------------+ +--------OBJ:V-N--------+ | | | +---------COMP_with:V-N---------+ | +-----------------------COMP_with:N-N----------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 716 +--------------------------------APPOS-------------------------------+ +--------MOD_ATT:N-N--------+ +---------------------COMP_with:V_PASS-N---------------------+ +-----------------------COMP_with:N-N----------------------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (associated,polymerase) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) OBJ:V-N (associated,RNA) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V_PASS-N (recognized,factor) APPOS (RNA,GENEXXX) Parse 717 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +----------------------------APPOS----------------------------+ +--------OBJ:V-N--------+ | | +---------------------------APPOS---------------------------+ | +--------COMP_with:V_PASS-N--------+ | | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . COMP_with:V_PASS-N (associated,sigma) SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) COMP_with:V-N (associated,primary) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) APPOS (polymerase,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 718 +---------------------------APPOS---------------------------+ +--------------------------------APPOS-------------------------------+ +--------MOD_ATT:N-N--------+ | +---------COMP_with:V-N---------+ | | +-----------COMP_with:V-N----------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V-N (associated,sigma) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 719 +---------------------------APPOS---------------------------+ +--------------------------------APPOS-------------------------------+ +--------MOD_ATT:N-N--------+ +------------------COMP_with:N-N------------------+ | | +--------------COMP_with:V-N-------------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V-N (associated,factor) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 720 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +---------------------------APPOS---------------------------+ +--------OBJ:V-N--------+ | | +------------------COMP_with:N-N------------------+ | +-----------------------COMP_with:V_PASS-N----------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) OBJ:V-N (with,factor) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 721 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +---------------------------APPOS---------------------------+ +----------------------------APPOS----------------------------+ +--------OBJ:V-N--------+ | | | +------COMP_with:V-N------+ | | +--------COMP_with:V_PASS-N--------+ | | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . COMP_with:V_PASS-N (associated,sigma) SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,sigma) SUBJ:V-N (activated,class) MOD_ATT:N-ADJ (sigma,primary) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) APPOS (polymerase,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 722 +---------------------------SUBJ:V_PASS-N---------------------------+ +-----------------------COMP_with:N-N----------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (associated,primary) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 723 +---------------------------SUBJ:V_PASS-N---------------------------+ +------COMP_with:V-N------+ +-----------COMP_with:V-N----------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) COMP_with:V-N (associated,sigma) Parse 724 +---------------------------SUBJ:V_PASS-N---------------------------+---------------COMP_with:V_PASS-N--------------+ +--------COMP_with:V_PASS-N--------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 725 +---------------------------SUBJ:V_PASS-N---------------------------+---------------COMP_with:V_PASS-N--------------+ +-------------------COMP_with:N-N-------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) MOD_ATT:N-N (factor,early-sporulation) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 726 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ +-----------COMP_with:V-N----------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V-N (associated,sigma) SUBJ:V-N (associated,polymerase) Parse 727 +---------------------------SUBJ:V_PASS-N---------------------------+ +----COMP_with:V_PASS-N---+ +-----------------------COMP_with:N-N----------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 728 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +----COMP_with:V_PASS-N---+ +-----------------------COMP_with:N-N----------------------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 729 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +---------------COMP_with:V_PASS-N--------------+ +-----------COMP_with:V-N----------+ +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_with:V-N (associated,sigma) Parse 730 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +-----------------------COMP_with:V_PASS-N----------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) COMP_with:V-N (associated,primary) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:V_PASS-N (recognized,sigma) Parse 731 +--------MOD_ATT:N-N--------+ +-----------------------COMP_with:N-N----------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+---------------COMP_with:N-N--------------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_with:N-N (polymerase,factor) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) Parse 732 +---------------------------APPOS---------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ | +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) COMP_with:V-N (associated,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 733 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ +--------------------------------APPOS-------------------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,early-sporulation) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 734 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +-----------------------COMP_with:N-N----------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+---------COMP_with:V-N---------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 735 +----------------------------APPOS----------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ | +--------COMP_with:V_PASS-N--------+ | | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) COMP_with:V_PASS-N (associated,sigma) SUBJ:V_PASS-N (activated,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (includes,GENEXXX) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 736 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +----COMP_with:V_PASS-N---+ +-----------------------COMP_with:N-N----------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,One) Parse 737 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------COMP_with:V_PASS-N--------------+ +--------------COMP_with:V-N-------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (recognized,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V-N (associated,factor) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 738 +--------MOD_ATT:N-N--------+ +------------------COMP_with:V_PASS-N------------------+ +--------COMP_with:V_PASS-N--------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (with,factor) COMP_with:V_PASS-N (recognized,sigma) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 739 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +----COMP_with:V_PASS-N---+ +-----------------------COMP_with:N-N----------------------+ | +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (associated,sigma) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (with,factor) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 740 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------COMP_with:V_PASS-N--------------+ +-----------COMP_with:V-N----------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (recognized,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) COMP_with:V-N (associated,sigma) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 741 +--------MOD_ATT:N-N--------+ +---------------------COMP_with:V_PASS-N---------------------+ +-----------------------COMP_with:N-N----------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 742 +--------MOD_ATT:N-N--------+ +---------------COMP_with:N-N--------------+ +-----------------------COMP_with:V_PASS-N----------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_with:N-N (polymerase,factor) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_with:V_PASS-N (recognized,sigma) Parse 743 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +------------------SUBJ:V-N------------------+ | +------------------COMP_with:N-N------------------+ | +-----------COMP_with:V-N----------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V-N (associated,sigma) SUBJ:V-N (associated,polymerase) Parse 744 +---------------------------APPOS---------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +------COMP_with:V-N------+ | +--------------------------------APPOS-------------------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,sigma) COMP_with:V-N (associated,early-sporulation) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) APPOS (RNA,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 745 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------------COMP_with:V_PASS-N---------------------+ +-----------------------COMP_with:N-N----------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 746 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +------------------COMP_with:V_PASS-N------------------+ +-----------------------COMP_with:V_PASS-N----------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) COMP_with:V_PASS-N (recognized,sigma) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (associated,polymerase) Parse 747 +---------------------------APPOS---------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ | +-----------------------COMP_with:V_PASS-N----------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (associated,polymerase) Parse 748 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------------------------------APPOS-------------------------------+ +--------OBJ:V-N--------+ | | | +--------------COMP_with:V-N-------------+ | | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) COMP_with:V-N (associated,primary) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) COMP_with:V-N (associated,factor) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 749 +--------MOD_ATT:N-N--------+ +------------------COMP_with:N-N------------------+ +----------------------------APPOS----------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 750 +---------------------------APPOS---------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ | +-----------------------COMP_with:V_PASS-N----------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) APPOS (RNA,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (associated,polymerase) Parse 751 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +------------------------APPOS-----------------------+ +-----------------COMP_with:V_PASS-N----------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (associated,primary) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (with,factor) COMP_with:V_PASS-N (recognized,early-sporulation) SUBJ:V_PASS-N (recognized,One) Parse 752 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------COMP_with:V_PASS-N--------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (recognized,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V_PASS-N (recognized,One) Parse 753 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +------------------------APPOS-----------------------+ +--------OBJ:V-N--------+ | | | +----COMP_with:V_PASS-N---+ | +-----------COMP_with:V-N----------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-ADJ (sigma,primary) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) OBJ:V-N (with,factor) COMP_with:V-N (associated,sigma) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (recognized,One) Parse 754 +--------MOD_ATT:N-N--------+ +------------------COMP_with:V_PASS-N------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) OBJ:V-N (with,factor) COMP_with:V_PASS-N (recognized,sigma) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 755 +---------------------------APPOS---------------------------+ +--------MOD_ATT:N-N--------+ +------------------COMP_with:N-N------------------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 756 +------------------------APPOS-----------------------+ +--------MOD_ATT:N-N--------+ +---------------COMP_with:N-N--------------+ | +-----------------COMP_with:V_PASS-N----------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_with:N-N (polymerase,factor) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V_PASS-N (recognized,early-sporulation) Parse 757 +--------------------------------APPOS-------------------------------+ +--------MOD_ATT:N-N--------+ +---------COMP_with:V-N---------+ +-----------------------COMP_with:N-N----------------------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) OBJ:V-N (associated,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,early-sporulation) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) OBJ:V-N (includes,GENEXXX) OBJ:V-N (associated,RNA) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 758 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +------------------------APPOS-----------------------+ +--------OBJ:V-N--------+ | | | +----COMP_with:V_PASS-N---+ | +-----------------------COMP_with:N-N----------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V_PASS-N (recognized,One) Parse 759 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +------------------------APPOS-----------------------+ +----------------------------APPOS----------------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_with:V_PASS-N (associated,primary) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) OBJ:V-N (with,factor) APPOS (polymerase,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 760 +--------MOD_ATT:N-N--------+ +------------------COMP_with:V_PASS-N------------------+ +----------------------------APPOS----------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) COMP_with:V_PASS-N (recognized,sigma) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 761 +---------------------------SUBJ:V_PASS-N---------------------------+ +--------------------------------APPOS-------------------------------+ +------------------SUBJ:V-N------------------+ +------------------COMP_with:V_PASS-N------------------+ +-----------------------COMP_with:N-N----------------------+ | +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) COMP_with:V_PASS-N (recognized,sigma) OBJ:V-N (with,factor) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) Parse 762 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +---------------------------APPOS---------------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) COMP_with:V-N (associated,primary) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 763 +---------------------------APPOS---------------------------+ +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ | | +-----------COMP_with:V-N----------+ | +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) COMP_with:V-N (associated,sigma) MOD_ATT:N-N (sigma,primary) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 764 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +------------------------APPOS-----------------------+ +--------------------------------APPOS-------------------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) COMP_with:V-N (associated,early-sporulation) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (associated,primary) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (recognized,One) Parse 765 +---------------------------APPOS---------------------------+ +--------MOD_ATT:N-N--------+ | +---------COMP_with:V-N---------+ | +-----------------------COMP_with:V_PASS-N----------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (associated,polymerase) Parse 766 +--------------------------------APPOS-------------------------------+ +--------MOD_ATT:N-N--------+ +---------------------COMP_with:V_PASS-N---------------------+ +-----------------------COMP_with:N-N----------------------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (associated,polymerase) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,early-sporulation) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) OBJ:V-N (includes,GENEXXX) OBJ:V-N (associated,RNA) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 767 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------------------------------APPOS-------------------------------+ +--------OBJ:V-N--------+ | | +---------------COMP_with:N-N--------------+ +-----------------------COMP_with:N-N----------------------+ | | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) SUBJ:V-N (associated,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) COMP_with:N-N (polymerase,factor) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (associated,RNA) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (recognized,One) Parse 768 +------------------------APPOS-----------------------+ +--------------------------------APPOS-------------------------------+ +--------MOD_ATT:N-N--------+ | +-------COMP_with:V_PASS-N------+ | +-----------------------COMP_with:N-N----------------------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ | +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (associated,polymerase) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) OBJ:V-N (associated,RNA) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) Parse 769 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +---------------------------APPOS---------------------------+ +--------OBJ:V-N--------+ | | +------------------COMP_with:N-N------------------+ | +--------------------------COMP_with:V_PASS-N-------------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_with:N-N (RNA,factor) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 770 +---------------------------SUBJ:V_PASS-N---------------------------+---------------COMP_with:V_PASS-N--------------+ +-----------COMP_with:V-N----------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V-N (associated,sigma) SUBJ:V-N (associated,polymerase) Parse 771 +---------------------------SUBJ:V_PASS-N---------------------------+---------------COMP_with:V_PASS-N--------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) COMP_with:V-N (associated,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 772 +--------MOD_ATT:N-N--------+ +----COMP_with:V_PASS-N---+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_with:V-N (associated,early-sporulation) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) OBJ:V-N (with,factor) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (promoter,GENEXXX) Parse 773 +--------MOD_ATT:N-N--------+ +------------------COMP_with:N-N------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) COMP_with:V_PASS-N (associated,early-sporulation) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,primary) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 774 +---------------------------SUBJ:V_PASS-N---------------------------+------------------COMP_with:V_PASS-N------------------+ +-----------------------COMP_with:N-N----------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 775 +---------------------------SUBJ:V_PASS-N---------------------------+------------------COMP_with:V_PASS-N------------------+ +-----------------------COMP_with:N-N----------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (sigma,primary) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 776 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +------------------COMP_with:N-N------------------+ +-----------------------COMP_with:N-N----------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V-N (includes,class) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 777 +--------MOD_ATT:N-N--------+ +------------------COMP_with:N-N------------------+ +--------------COMP_with:V-N-------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) COMP_with:V-N (associated,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 778 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ | +-----------COMP_with:V-N----------+ | | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) OBJ:V-N (with,factor) COMP_with:V-N (associated,sigma) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 779 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +------------------COMP_with:N-N------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) COMP_with:V-N (associated,early-sporulation) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 780 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------COMP_with:V_PASS-N--------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (recognized,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) COMP_with:V-N (associated,early-sporulation) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 781 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +-----------------------COMP_with:V_PASS-N----------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) COMP_with:V-N (associated,primary) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (associated,polymerase) Parse 782 +--------MOD_ATT:N-N--------+ +------------------------APPOS-----------------------+ +-----------------COMP_with:V_PASS-N----------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (associated,primary) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V_PASS-N (recognized,early-sporulation) Parse 783 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +------------------COMP_with:N-N------------------+ +--------------------------------APPOS-------------------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,early-sporulation) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (sigma,primary) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 784 +---------------------------APPOS---------------------------+ +--------MOD_ATT:N-N--------+ +------------------COMP_with:N-N------------------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 785 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +-----------------------COMP_with:N-N----------------------+ | +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) COMP_with:V-N (associated,primary) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 786 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +---------------------------APPOS---------------------------+ +--------OBJ:V-N--------+ | | | +------COMP_with:V-N------+ | +-----------COMP_with:V-N----------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,sigma) SUBJ:V-N (activated,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) COMP_with:V-N (associated,sigma) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 787 +---------------------------SUBJ:V_PASS-N---------------------------+ +--------------------------------APPOS-------------------------------+ +------------------SUBJ:V-N------------------+ | +---------------------------APPOS---------------------------+ | +-----------COMP_with:V-N----------+ | +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) COMP_with:V-N (associated,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) COMP_with:V-N (associated,sigma) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) APPOS (RNA,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 788 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +------------------------APPOS-----------------------+ +-----------------------COMP_with:V_PASS-N----------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (associated,primary) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,early-sporulation) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V_PASS-N (recognized,One) Parse 789 +---------------------------SUBJ:V_PASS-N---------------------------+ +--------------------------------APPOS-------------------------------+ +------------------SUBJ:V-N------------------+ +------------------COMP_with:V_PASS-N------------------+ +-----------------------COMP_with:N-N----------------------+ | +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) MOD_ATT:N-N (sigma,primary) COMP_with:V_PASS-N (recognized,sigma) OBJ:V-N (with,factor) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 790 +---------------------------SUBJ:V_PASS-N---------------------------+ +--------------------------------APPOS-------------------------------+ +------------------SUBJ:V-N------------------+ +------------------COMP_with:V_PASS-N------------------+ +-----------------------COMP_with:N-N----------------------+ | +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) COMP_with:V_PASS-N (recognized,sigma) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 791 +---------------------------APPOS---------------------------+ +--------MOD_ATT:N-N--------+ +------------------COMP_with:N-N------------------+ | +--------------------------COMP_with:V_PASS-N-------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 792 +---------------------------APPOS---------------------------+ +--------MOD_ATT:N-N--------+ +------------------COMP_with:N-N------------------+ | +--------------------------COMP_with:V_PASS-N-------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (sigma,primary) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 793 +---------------------------APPOS---------------------------+ +--------------------------------APPOS-------------------------------+ +--------MOD_ATT:N-N--------+ | +---------COMP_with:V-N---------+ | +-----------------------COMP_with:N-N----------------------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (associated,polymerase) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) OBJ:V-N (includes,GENEXXX) OBJ:V-N (associated,RNA) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 794 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +------------------------APPOS-----------------------+ +--------------------------------APPOS-------------------------------+ +--------OBJ:V-N--------+ | | | +----COMP_with:V_PASS-N---+ | +-----------------------COMP_with:N-N----------------------+ | | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (associated,RNA) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (recognized,One) Parse 795 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) COMP_with:V-N (associated,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 796 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ +-----------------------COMP_with:N-N----------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 797 +--------MOD_ATT:N-N--------+ +-----------COMP_with:V_PASS-N-----------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +---MOD_ATT:N-N---+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V_PASS-N (associated,factor) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) COMP_with:V-N (associated,primary) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 798 +---------------------------SUBJ:V_PASS-N---------------------------+---------------COMP_with:V_PASS-N--------------+ +-----------------------COMP_with:N-N----------------------+ +------------------SUBJ:V-N------------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) Parse 799 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +------COMP_with:V-N------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,sigma) SUBJ:V-N (activated,class) COMP_with:V-N (associated,early-sporulation) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 800 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +----------------------------APPOS----------------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) COMP_with:V-N (associated,primary) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) OBJ:V-N (with,factor) APPOS (polymerase,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) Parse 801 +---------------------------SUBJ:V_PASS-N---------------------------+---------------COMP_with:V_PASS-N--------------+ +--------------------------------APPOS-------------------------------+ | +-------------SUBJ:V-N-------------+ +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_with:V-N (associated,early-sporulation) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,primary) OBJ:V-N (with,factor) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) Parse 802 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +-----------------COMP_with:V_PASS-N----------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) COMP_with:V-N (associated,primary) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V_PASS-N (recognized,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 803 +---------------------------APPOS---------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ | +------COMP_with:V-N------+ | +-----------------------COMP_with:N-N----------------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) MOD_ATT:N-N (sigma,early-sporulation) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 804 +---------------------------SUBJ:V_PASS-N---------------------------+---------------COMP_with:V_PASS-N--------------+ +-----------------------COMP_with:V_PASS-N----------------------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (associated,polymerase) Parse 805 +--------MOD_ATT:N-N--------+ +---------COMP_with:V-N---------+ +-----------------------COMP_with:N-N----------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,factor) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 806 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------COMP_with:V-N------+ +-----------------------COMP_with:N-N----------------------+ | | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) APPOS (RNA,GENEXXX) Parse 807 +--------MOD_ATT:N-N--------+ +------------------COMP_with:N-N------------------+ +-------------------COMP_with:N-N-------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +---MOD_ATT:N-N---+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 808 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +-----------------------COMP_with:V_PASS-N----------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (associated,primary) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,early-sporulation) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V_PASS-N (recognized,One) Parse 809 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ +---------------COMP_with:V_PASS-N--------------+ +-----------------------COMP_with:V_PASS-N----------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (associated,polymerase) Parse 810 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +----------------------------APPOS----------------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_with:V_PASS-N (associated,primary) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) OBJ:V-N (with,factor) APPOS (polymerase,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V_PASS-N (recognized,One) Parse 811 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------COMP_with:V_PASS-N--------------+ +--------COMP_with:V_PASS-N--------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (recognized,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_with:V_PASS-N (associated,sigma) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (with,factor) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V_PASS-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 812 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +----COMP_with:V_PASS-N---+ +-----------------------COMP_with:N-N----------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V_PASS-N (recognized,One) Parse 813 +---------------------------APPOS---------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ | +-----------------COMP_with:V_PASS-N----------------+ | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) COMP_with:V_PASS-N (recognized,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 814 +--------MOD_ATT:N-N--------+ +------------------COMP_with:N-N------------------+ +----------------------------APPOS----------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (promoter,GENEXXX) APPOS (polymerase,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 815 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +------------------COMP_with:N-N------------------+ +-----------------COMP_with:V_PASS-N----------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,primary) COMP_with:V_PASS-N (recognized,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 816 +--------MOD_ATT:N-N--------+ +----COMP_with:V_PASS-N---+ +--------------------------------APPOS-------------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ | +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (polymerase,RNA) COMP_with:V-N (associated,early-sporulation) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,sigma) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) APPOS (RNA,GENEXXX) Parse 817 +--------------------------------APPOS-------------------------------+ +--------MOD_ATT:N-N--------+ +-----------------------COMP_with:N-N----------------------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (associated,polymerase) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) OBJ:V-N (associated,RNA) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (associated,primary) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) Parse 818 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +------------------COMP_with:N-N------------------+ +-----------------COMP_with:V_PASS-N----------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) OBJ:V-N (with,factor) COMP_with:V_PASS-N (recognized,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 819 +--------MOD_ATT:N-N--------+ +------------------COMP_with:N-N------------------+ +----------------------------APPOS----------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (promoter,GENEXXX) APPOS (polymerase,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 820 +--------MOD_ATT:N-N--------+ +------------------------APPOS-----------------------+ +--------------------------COMP_with:V_PASS-N-------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (associated,primary) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (recognized,factor) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) Parse 821 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +---------------------------APPOS---------------------------+ +--------OBJ:V-N--------+ | | +------------------COMP_with:N-N------------------+ | | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) COMP_with:V-N (associated,early-sporulation) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 822 +--------MOD_ATT:N-N--------+ +---------------COMP_with:V_PASS-N--------------+ +----------------------------APPOS----------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+-------------------COMP_with:N-N-------------------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (polymerase,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 823 +------------------------APPOS-----------------------+ +--------MOD_ATT:N-N--------+ +---------------COMP_with:N-N--------------+ | +-----------------------COMP_with:N-N----------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) COMP_with:N-N (polymerase,factor) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) Parse 824 +---------------------------APPOS---------------------------+ +--------MOD_ATT:N-N--------+ +------------------COMP_with:N-N------------------+ | +--------------COMP_with:V-N-------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) COMP_with:V-N (associated,factor) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 825 +---------------------------APPOS---------------------------+ +--------MOD_ATT:N-N--------+ | +------COMP_with:V-N------+ | +----------------------------APPOS----------------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) COMP_with:V-N (associated,sigma) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) APPOS (polymerase,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 826 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------------------------------APPOS-------------------------------+ +--------OBJ:V-N--------+ | | +------------------COMP_with:N-N------------------+ | +-----------COMP_with:V-N----------+ | | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V-N (associated,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 827 +---------------------------APPOS---------------------------+ +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ | +-----------------------COMP_with:N-N----------------------+ | | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 828 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +---------------------------APPOS---------------------------+ +--------------------------------APPOS-------------------------------+ +--------OBJ:V-N--------+ | | | +------COMP_with:V-N------+ | | +-----------COMP_with:V-N----------+ | | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V-N (associated,sigma) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,sigma) SUBJ:V-N (activated,class) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 829 +---------------------------SUBJ:V_PASS-N---------------------------+---------------COMP_with:V_PASS-N--------------+ +-----------COMP_with:V-N----------+ +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V-N (associated,sigma) SUBJ:V-N (associated,polymerase) Parse 830 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------COMP_with:V_PASS-N--------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (recognized,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V-N (activated,class) COMP_with:V-N (associated,early-sporulation) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 831 +----------------------------APPOS----------------------------+ +--------MOD_ATT:N-N--------+ | +--------COMP_with:V_PASS-N--------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . COMP_with:V_PASS-N (associated,sigma) SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) COMP_with:V-N (associated,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) APPOS (polymerase,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 832 +--------MOD_ATT:N-N--------+ +---------------COMP_with:V_PASS-N--------------+ +-----------------------COMP_with:N-N----------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) Parse 833 +--------MOD_ATT:N-N--------+ +------COMP_with:V-N------+ +-----------------------COMP_with:V_PASS-N----------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (associated,polymerase) Parse 834 +---------------------------SUBJ:V_PASS-N---------------------------+ +--------------------------------APPOS-------------------------------+ +------------------SUBJ:V-N------------------+ | +-----------------------COMP_with:N-N----------------------+ | +---SUBJ:V_PASS-N--+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_by:V_PASS-N (recognized,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (associated,primary) SUBJ:V-N (includes,class) MOD_ATT:N-N (polymerase,RNA) OBJ:V-N (with,factor) OBJ:V-N (includes,GENEXXX) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) Parse 835 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ +-----------------------COMP_with:N-N----------------------+ | +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 836 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +------------------------APPOS-----------------------+ +-----------------------COMP_with:N-N----------------------+ | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (associated,primary) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,One) Parse 837 +--------------------------------APPOS-------------------------------+ +--------MOD_ATT:N-N--------+ +------------------COMP_with:N-N------------------+ | +-----------COMP_with:V-N----------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V-N (associated,sigma) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 838 +---------------------------APPOS---------------------------+ +--------MOD_ATT:N-N--------+ | +------COMP_with:V-N------+ | +-----------------COMP_with:V_PASS-N----------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ | +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,sigma) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V_PASS-N (recognized,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 839 +--------------------------------APPOS-------------------------------+ +--------MOD_ATT:N-N--------+ +---------------COMP_with:V_PASS-N--------------+ | +-----------COMP_with:V-N----------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V-N (associated,sigma) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) SUBJ:V_PASS-N (recognized,promoter) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) Parse 840 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------------------------------APPOS-------------------------------+ +--------OBJ:V-N--------+ | | +------------------COMP_with:N-N------------------+ +-----------------------COMP_with:N-N----------------------+ | | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (associated,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (associated,RNA) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 841 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------------------------------APPOS-------------------------------+ +--------OBJ:V-N--------+ | | +------------------------APPOS-----------------------+ | +-----------COMP_with:V-N----------+ | | +-----SUBJ:V-N-----+ | +-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +COMP_of:N+ | +-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+COMP_with:V_PASS-N+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) COMP_with:V-N (associated,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) APPOS (polymerase,GENEXXX) SUBJ:V-N (activated,class) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) COMP_with:V_PASS-N (associated,primary) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (recognized,One) Parse 842 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +------------------COMP_with:N-N------------------+ +-----------------------COMP_with:N-N----------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V-N (includes,class) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 843 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +---------------------------APPOS---------------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) COMP_with:V-N (associated,primary) OBJ:V-N (with,factor) SUBJ:V_PASS-N (recognized,class) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) COMP_with:V-N (associated,early-sporulation) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 844 +--------MOD_ATT:N-N--------+ +------COMP_with:V-N------+ +-----------------COMP_with:V_PASS-N----------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,sigma) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,primary) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V_PASS-N (recognized,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 845 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +----------------------------APPOS----------------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+--COMP_with:V_PASS-N--+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) SUBJ:V-N (activated,class) COMP_with:V-N (associated,primary) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (includes,GENEXXX) COMP_with:V_PASS-N (associated,early-sporulation) OBJ:V-N (with,factor) APPOS (polymerase,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 846 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+---------------COMP_with:V_PASS-N--------------+ +-----------------------COMP_with:N-N----------------------+ | +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 847 +--------------------------------APPOS-------------------------------+ +--------MOD_ATT:N-N--------+ +------COMP_with:V-N------+ | +-----------COMP_with:V-N----------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_AT+ +--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V-N (associated,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 848 +---------------------------SUBJ:V_PASS-N---------------------------+ +--------------------------------APPOS-------------------------------+ +------------------SUBJ:V-N------------------+ | +------------------COMP_with:N-N------------------+ +-----------------------COMP_with:N-N----------------------+ | +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V-N (includes,class) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 849 +---------------------------APPOS---------------------------+ +--------MOD_ATT:N-N--------+ +------------------COMP_with:N-N------------------+ | +-----------------COMP_with:V_PASS-N----------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V_PASS-N (recognized,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 850 +--------------------------------APPOS-------------------------------+ +--------MOD_ATT:N-N--------+ +---------------COMP_with:V_PASS-N--------------+ +-----------------------COMP_with:N-N----------------------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (associated,polymerase) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) OBJ:V-N (includes,GENEXXX) OBJ:V-N (associated,RNA) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 851 +---------------------------APPOS---------------------------+ +--------MOD_ATT:N-N--------+ +------------------COMP_with:N-N------------------+ | +-----------------COMP_with:V_PASS-N----------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_with:V_PASS-N (recognized,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) COMP_by:V_PASS-N (recognized,polymerase) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 852 +---------------------------APPOS---------------------------+ +--------MOD_ATT:N-N--------+ +------------------COMP_with:N-N------------------+ | +-----------------------COMP_with:V_PASS-N----------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) APPOS (RNA,GENEXXX) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) COMP_with:V_PASS-N (recognized,sigma) SUBJ:V-N (associated,polymerase) Parse 853 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------------------------------APPOS-------------------------------+ +--------OBJ:V-N--------+ | | +------------------COMP_with:N-N------------------+ +-----------------------COMP_with:N-N----------------------+ | | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (associated,polymerase) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,early-sporulation) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (associated,RNA) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 854 +---------------------------APPOS---------------------------+ +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------COMP_with:N-N------------------+ | +-----------------------COMP_with:N-N----------------------+ | +------------------SUBJ:V-N------------------+ | +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-ADJ (factor,primary) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V_PASS-N (activated,GENEXXX) SUBJ:V-N (includes,class) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 855 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------------------------------APPOS-------------------------------+ +--------OBJ:V-N--------+ | | +---------------------------APPOS---------------------------+ +-----------------------COMP_with:N-N----------------------+ | | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) COMP_with:V-N (associated,primary) MOD_ATT:N-N (factor,sigma) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) OBJ:V-N (activated,One) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) OBJ:V-N (associated,RNA) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 856 +---------------------------SUBJ:V_PASS-N---------------------------+ +---------------------------APPOS---------------------------+ +--------------------------------APPOS-------------------------------+ +------------------SUBJ:V-N------------------+ | +------------------COMP_with:N-N------------------+ | +-----------------------COMP_with:N-N----------------------+ | +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) COMP_with:N-N (RNA,factor) SUBJ:V-N (includes,class) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 857 +---------------------------APPOS---------------------------+ +--------------------------------APPOS-------------------------------+ +--------MOD_ATT:N-N--------+ +------------------COMP_with:N-N------------------+ | | +-----------COMP_with:V-N----------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_with:V-N (associated,sigma) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 858 +--------MOD_ATT:N-N--------+ +------------------COMP_with:N-N------------------+ +-----------------------COMP_with:N-N----------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 859 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | | +--------------------------------APPOS-------------------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) COMP_with:V-N (associated,early-sporulation) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) COMP_with:V-N (associated,primary) MOD_ATT:N-N (factor,sigma) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 860 +---------------------------SUBJ:V_PASS-N---------------------------+ +------------------SUBJ:V-N------------------+ | +---------------------------APPOS---------------------------+ +-----------------------COMP_with:N-N----------------------+ +---SUBJ:V_PASS-N--+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) COMP_with:V-N (associated,primary) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (factor,early-sporulation) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (includes,second) OBJ:V-N (includes,GENEXXX) SUBJ:V_PASS-N (activated,class) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (includes,class) OBJ:V-N (with,factor) SUBJ:V-N (associated,polymerase) APPOS (RNA,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 861 +--------MOD_ATT:N-N--------+ +---------------------------APPOS---------------------------+ +-----------------------COMP_with:N-N----------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,primary) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) Parse 862 +---------------------------APPOS---------------------------+ +--------MOD_ATT:N-N--------+ +------------------COMP_with:N-N------------------+ | +-----------------------COMP_with:N-N----------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-ADJ (sigma,primary) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 863 +--------------------------------APPOS-------------------------------+ +---------------------------SUBJ:V_PASS-N---------------------------+---------------COMP_with:V_PASS-N--------------+ +-----------------------COMP_with:N-N----------------------+ | | +-------------SUBJ:V-N-------------+ | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | +COMP_of:N+SUBJ:V_P+ +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) OBJ:V-N (associated,RNA) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) OBJ:V-N (associated,RNA) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,class) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,second) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V_PASS-N (activated,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 864 +---------------------------APPOS---------------------------+ +--------MOD_ATT:N-N--------+ +------------------COMP_with:N-N------------------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ | | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_AT+MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+-----COMP_with:V-N----+ +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,early-sporulation) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) OBJ:V-N (with,factor) MOD_ATT:N-N (sigma,primary) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 865 +----------------------------APPOS----------------------------+ +--------MOD_ATT:N-N--------+ +---------------COMP_with:V_PASS-N--------------+ | +--------COMP_with:V_PASS-N--------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+-COMP_by:V_PASS-N+ | +-------------OBJ:V-N------------+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT:N-N+ | +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . COMP_with:V_PASS-N (associated,sigma) SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) OBJ:V-N (with,factor) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) APPOS (polymerase,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,polymerase) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (polymerase,RNA) SUBJ:V-N (associated,polymerase) Parse 866 +--------------------------------APPOS-------------------------------+ +--------MOD_ATT:N-N--------+ +------------------COMP_with:N-N------------------+ +-----------------------COMP_with:N-N----------------------+ | | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +-MOD_ATT:N-N+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+ +--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (associated,polymerase) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) MOD_ATT:N-N (factor,sigma) MOD_ATT:N-N (factor,primary) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) OBJ:V-N (includes,GENEXXX) OBJ:V-N (associated,RNA) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) Parse 867 +--------MOD_ATT:N-N--------+ +---------------COMP_with:V_PASS-N--------------+ +-----------------------COMP_with:N-N----------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+-COMP_by:V_PASS-N+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ | | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ | +MOD_AT+SUBJ:V_PAS+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ +MOD_ATT:N-N+MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (recognized,primary) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) SUBJ:V_PASS-N (associated,polymerase) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (polymerase,RNA) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (associated,polymerase) COMP_by:V_PASS-N (recognized,polymerase) OBJ:V-N (includes,GENEXXX) MOD_ATT:N-N (sigma,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (promoter,GENEXXX) Parse 868 +--------MOD_ATT:N-N--------+ +---------------------------APPOS---------------------------+ +-----------COMP_with:V-N----------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ | +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +-------------OBJ:V-N------------+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+---COMP_with:V-N--+ +MOD_A+ +--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_ATT:N-N+ +--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) SUBJ:V-N (includes,promoter) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) COMP_with:V-N (associated,primary) SUBJ:V_PASS-N (recognized,promoter) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) COMP_with:V-N (associated,sigma) OBJ:V-N (with,factor) APPOS (RNA,GENEXXX) SUBJ:V-N (associated,polymerase) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-N (sigma,early-sporulation) SUBJ:V-N (associated,polymerase) Parse 869 +------------------------------SUBJ:V_PASS-N-----------------------------+ +---------------------SUBJ:V-N--------------------+ | +--------OBJ:V-N--------+ | +---------------COMP_with:V_PASS-N--------------+ +-----------------------COMP_with:N-N----------------------+ | +-----SUBJ:V-N-----+ | | +-----OBJ:V-N-----+ +--------OBJ:V-N--------+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | +COMP_of:N+ | +-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) COMP_of:N-N (class,GENEXXX) APPOS (GENEXXX,GENEXXX) COMP_with:V_PASS-N (recognized,primary) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) OBJ:V-N (associated,RNA) SUBJ:V-N (activated,class) MOD_ATT:N-N (factor,sigma) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) OBJ:V-N (activated,One) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) SUBJ:V-N (includes,One) COMP_by:V_PASS-N (recognized,RNA) OBJ:V-N (includes,GENEXXX) OBJ:V-N (with,factor) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) SUBJ:V_PASS-N (recognized,One) Parse 870 +--------MOD_ATT:N-N--------+ +------------------COMP_with:N-N------------------+ +-----------------------COMP_with:N-N----------------------+ | +---MOD_ATT:N-N---+-------------SUBJ:V_PASS-N-------------+ +-----OBJ:V-N-----+ +MOD_ATT:N-AD+ +-------------SUBJ:V_PASS-N------------+ +-----OBJ:V-N-----+ +---MOD_ATT:N-N---+ | | +MOD_ATT:+----SUBJ:V-N----+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ +----SUBJ:V-N---+-OBJ:V-N+ +COMP_by:V_+ +-SUBJ:V-N-+ | +MOD_A+--APPOS--+--APPOS--+ | | | | | | | | | | | | | | | | | | | | | | | | | | | One class of GENEXXX activated promoter , which includes GENEXXX , is recognized by RNA polymerase associated with the primary sigma factor , GENEXXX ( GENEXXX ) ; the second , which includes GENEXXX , is recognized by RNA polymerase associated with an early-sporulation sigma factor , GENEXXX ( GENEXXX ) . SUBJ:V_PASS-N (recognized,second) APPOS (GENEXXX,GENEXXX) MOD_ATT:N-ADJ (factor,primary) SUBJ:V-N (includes,promoter) APPOS (factor,GENEXXX) MOD_ATT:N-N (factor,sigma) SUBJ:V-N (includes,second) OBJ:V-N (associated,RNA) MOD_ATT:N-N (promoter,class) OBJ:V-N (associated,RNA) MOD_ATT:N-N (factor,sigma) SUBJ:V_PASS-N (recognized,promoter) COMP_with:N-N (RNA,factor) APPOS (GENEXXX,GENEXXX) APPOS (factor,GENEXXX) SUBJ:V-N (associated,polymerase) OBJ:V-N (includes,GENEXXX) COMP_by:V_PASS-N (recognized,RNA) MOD_ATT:N-ADJ (promoter,activated) OBJ:V-N (includes,GENEXXX) COMP_with:N-N (RNA,factor) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (factor,early-sporulation) COMP_by:V_PASS-N (recognized,RNA) SUBJ:V-N (associated,polymerase) PMID: 9685500-5 Sentence 4 DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . Parse 0 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +-------------------------------------OBJ:V-N-------------------------------------+ | | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +OBJ:+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_around:V-N (protected,boxes) COMP_at:V-N (protected,positions) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (demonstrated,studies) MOD:V-ADV (protected,as) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (region,large) OBJ:V-N (as,those) MOD_ATT:N-N (sites,DNase) OBJ:V-N (protected,sites) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 1 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ | +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | | +---------------------------COMP_of:N-N---------------------------+ | | | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | | +SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,those) MOD:V-ADV (protected,as) COMP_of:N-N (region,sites) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_by:V-N (protected,zinc) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) Parse 2 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ | +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | +-------------------------------------OBJ:V-N-------------------------------------+ | | | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_around:V-N (protected,boxes) COMP_at:V-N (protected,positions) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_as:V-N (protected,those) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_by:V-N (protected,zinc) MOD_ATT:N-N (sites,DNase) OBJ:V-N (protected,sites) MOD_ATT:N-ADJ (DNase,induced) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) Parse 3 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ | +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | | +---------------------------COMP_of:N-N---------------------------+ | | | | | | +--------------------MOD_ATT:N-N-------------------+ | | | | | | | +----------------MOD_ATT:N-N---------------+ | | | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_by:V-N (protected,zinc) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-N (sites,DNase) COMP_as:V-N (protected,those) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 4 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | +------------------------------------------MOD:V-ADV-----------------------------------------+ | +--------------------------------------COMP_at:V-N-------------------------------------+ | | +-------------------------COMP_around:V-N------------------------+ | | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | | +SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) MOD:V-ADV (protected,as) COMP_by:V-N (induced,zinc) MOD:V-ADV (induced,as) COMP_at:V-N (induced,positions) MOD_ATT:N-N (protection,DNase) SUBJ:V-N (induced,those) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) COMP_around:V-N (induced,boxes) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) Parse 5 +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) COMP_of:N-N (region,promoter) COMP_by:V_PASS-N (induced,zinc) COMP_as:V-N (protected,those) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 6 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD:V-ADV (protected,as) COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) OBJ:V-N (as,those) MOD_ATT:N-N (sites,DNase) COMP_of:N-N (region,promoter) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 7 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ | +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | | +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ | +------------------------------------------MOD:V-ADV-----------------------------------------+ | | +--------------------------------------COMP_at:V-N-------------------------------------+ | | | +-------------------------COMP_around:V-N------------------------+ | | | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | | +SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) MOD:V-ADV (protected,as) MOD:V-ADV (induced,as) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) OBJ:V-N (induced,sites) SUBJ:V-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) COMP_at:V-N (induced,positions) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_by:V-N (protected,zinc) COMP_by:V-N (induced,zinc) COMP_of:N-N (region,promoter) COMP_around:V-N (induced,boxes) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) Parse 8 +------------------------------------------MOD:V-ADV-----------------------------------------+ +--------------------------------------COMP_at:V-N-------------------------------------+ | +-------------------------COMP_around:V-N------------------------+ | | +---------------------------------------SUBJ:V-N---------------------------------------+-----------OBJ:V-N-----------+ | | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +OBJ:+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:ADJ-N (induced,zinc) MOD:V-ADV (induced,as) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (induced,positions) SUBJ:V-N (induced,studies) MOD_ATT:N-N (studies,protection) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (region,large) OBJ:V-N (as,those) MOD_ATT:N-N (sites,DNase) OBJ:V-N (induced,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) Parse 9 +-------------------------------------------COMP_as:V-N-------------------------------------------+ +--------------------------------------COMP_at:V-N-------------------------------------+ | +-------------------------COMP_around:V-N------------------------+ | | +---------------------------------------SUBJ:V-N---------------------------------------+-----------OBJ:V-N-----------+ | | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:ADJ-N (induced,zinc) COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) COMP_as:V-N (induced,those) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (induced,positions) SUBJ:V-N (induced,studies) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) OBJ:V-N (induced,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) Parse 10 +-------------------------------------------COMP_as:V-N-------------------------------------------+ +--------------------------------------COMP_at:V-N-------------------------------------+ | +-------------------------COMP_around:V-N------------------------+ | | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) COMP_by:ADJ-N (induced,zinc) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) COMP_as:V-N (induced,those) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) OBJ:V-N (induced,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) Parse 11 +------------------------------------------MOD:V-ADV-----------------------------------------+ +--------------------------------------COMP_at:V-N-------------------------------------+ | +-------------------------COMP_around:V-N------------------------+ | | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +OBJ:+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) COMP_by:ADJ-N (induced,zinc) MOD:V-ADV (induced,as) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (region,large) OBJ:V-N (as,those) MOD_ATT:N-N (sites,DNase) OBJ:V-N (induced,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) Parse 12 +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ +-------------------------------------------COMP_as:V-N-------------------------------------------+ | +--------------------------------------COMP_at:V-N-------------------------------------+ | | +-------------------------COMP_around:V-N------------------------+ | | | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) SUBJ:V_PASS-N (induced,those) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_as:V-N (induced,those) SUBJ:V-N (protected,GENEXXX) COMP_by:V-N (induced,zinc) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) MOD_ATT:N-N (sites,DNase) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) Parse 13 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 14 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | | +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | +--SUBJ:V_PASS-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V_PASS-N (induced,positions) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 15 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | +--SUBJ:V_PASS-N--+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V_PASS-N (induced,positions) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 16 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) MOD:V-ADV (protected,as) OBJ:V-N (as,those) COMP_by:V_PASS-N (induced,zinc) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 17 +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | | +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) COMP_as:V-N (protected,those) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_by:V_PASS-N (induced,zinc) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 18 +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | | +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) COMP_as:V-N (protected,those) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 19 +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | | | +----------------MOD_ATT:N-N---------------+ | | | +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) COMP_as:V-N (protected,those) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 20 +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | | | +----------------MOD_ATT:N-N---------------+ | | | +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | | +--COMP_by:N-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) COMP_as:V-N (protected,those) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 21 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +--SUBJ:V_PASS-N--+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V_PASS-N (induced,positions) COMP_of:N-N (region,promoter) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 22 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +-------------------------------------OBJ:V-N-------------------------------------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +--SUBJ:V_PASS-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_around:V-N (protected,boxes) COMP_at:V-N (protected,positions) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (protected,sites) COMP_of:N-N (region,promoter) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 23 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +--------------------MOD_ATT:N-N-------------------+ | | | | | +----------------MOD_ATT:N-N---------------+ | | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-N (sites,GENEXXX) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 24 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +-------------------------------------OBJ:V-N-------------------------------------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_around:V-N (protected,boxes) COMP_at:V-N (protected,positions) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,sites) COMP_of:N-N (region,promoter) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 25 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +-------------------------------------OBJ:V-N-------------------------------------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_around:V-N (protected,boxes) COMP_at:V-N (protected,positions) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) MOD_ATT:N-N (studies,protection) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,sites) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 26 +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | | | +--------------------MOD_ATT:N-N-------------------+ | | | | | | +----------------MOD_ATT:N-N---------------+ | | | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-N (sites,GENEXXX) COMP_as:V-N (protected,those) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 27 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | | | +--------------------MOD_ATT:N-N-------------------+ | | | | | | +----------------MOD_ATT:N-N---------------+ | | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +OBJ:+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD:V-ADV (protected,as) COMP_of:N-N (region,sites) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (region,large) OBJ:V-N (as,those) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-N (sites,GENEXXX) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 28 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | | | +--------------------MOD_ATT:N-N-------------------+ | | | | | | +----------------MOD_ATT:N-N---------------+ | | | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | | | +--COMP_by:N-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD:V-ADV (protected,as) COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (as,those) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-N (sites,GENEXXX) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 29 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | | | +--------------------MOD_ATT:N-N-------------------+ | | | | | | +----------------MOD_ATT:N-N---------------+ | | | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-N (sites,GENEXXX) COMP_by:V-N (protected,zinc) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 30 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ | +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | | | +--------------------MOD_ATT:N-N-------------------+ | | | | | | +----------------MOD_ATT:N-N---------------+ | | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) COMP_as:V-N (protected,those) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-N (sites,GENEXXX) COMP_by:V-N (protected,zinc) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 31 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ | +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | | | +--------------------MOD_ATT:N-N-------------------+ | | | | | | +----------------MOD_ATT:N-N---------------+ | | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | | +SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,those) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD:V-ADV (protected,as) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-N (sites,GENEXXX) COMP_by:V-N (protected,zinc) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 32 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ | +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | +-----------SUBJ:V-N----------+ +-------------------------------------OBJ:V-N-------------------------------------+ | | | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_around:V-N (protected,boxes) COMP_at:V-N (protected,positions) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_as:V-N (protected,those) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (region,large) COMP_by:V-N (protected,zinc) MOD_ATT:N-N (sites,DNase) OBJ:V-N (protected,sites) SUBJ:V-N (studies,protection) MOD_ATT:N-ADJ (DNase,induced) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) Parse 33 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ | +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | | +---------------------------COMP_of:N-N---------------------------+ | | | | | | +--------------------MOD_ATT:N-N-------------------+ | | | | | | | +----------------MOD_ATT:N-N---------------+ | | | | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (protection,DNase) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_by:V-N (protected,zinc) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-N (sites,DNase) COMP_as:V-N (protected,those) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 34 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +--------------------------------------COMP_at:V-N-------------------------------------+ | +-------------------------COMP_around:V-N------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (promoter,GENEXXX) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) MOD_ATT:N-N (sites,DNase) COMP_of:N-N (region,promoter) COMP_by:V_PASS-N (induced,zinc) COMP_at:V-N (induced,positions) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) Parse 35 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +--------------------------------------COMP_at:V-N-------------------------------------+ | +-------------------------COMP_around:V-N------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_POST:N-ADJ (those,induced) OBJ:V-N (induced,sites) MOD_ATT:N-N (sites,DNase) COMP_of:N-N (region,promoter) COMP_at:V-N (induced,positions) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) Parse 36 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +--------------------------------------COMP_at:V-N-------------------------------------+ | +-------------------------COMP_around:V-N------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--SUBJ:V_PASS-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (induced,sites) MOD_ATT:N-N (sites,DNase) COMP_of:N-N (region,promoter) COMP_by:V_PASS-N (induced,zinc) COMP_at:V-N (induced,positions) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) Parse 37 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +--------------------------------------COMP_at:V-N-------------------------------------+ | +-------------------------COMP_around:V-N------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--SUBJ:V_PASS-N--+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (induced,sites) MOD_ATT:N-N (sites,DNase) COMP_of:N-N (region,promoter) COMP_by:V_PASS-N (induced,zinc) COMP_at:V-N (induced,positions) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) Parse 38 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 39 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +--------------------------------------COMP_at:V-N-------------------------------------+ | +-------------------------COMP_around:V-N------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) MOD_ATT:N-N (sites,DNase) COMP_of:N-N (region,promoter) COMP_by:V_PASS-N (induced,zinc) COMP_at:V-N (induced,positions) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) Parse 40 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +--------------------------------------COMP_at:V-N-------------------------------------+ | +-------------------------COMP_around:V-N------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-N (promoter,GENEXXX) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_POST:N-ADJ (those,induced) OBJ:V-N (induced,sites) MOD_ATT:N-N (sites,DNase) COMP_of:N-N (region,promoter) COMP_at:V-N (induced,positions) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) Parse 41 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | +------------------------------------------MOD:V-ADV-----------------------------------------+ | +--------------------------------------COMP_at:V-N-------------------------------------+ | | +-------------------------COMP_around:V-N------------------------+ | | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | +--COMP_by:N-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) MOD:V-ADV (protected,as) MOD:V-ADV (induced,as) COMP_at:V-N (induced,positions) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (as,those) COMP_by:N-N (those,zinc) OBJ:V-N (induced,sites) COMP_around:V-N (induced,boxes) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) Parse 42 +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | +-------------------------------------------COMP_as:V-N-------------------------------------------+ | +--------------------------------------COMP_at:V-N-------------------------------------+ | | +-------------------------COMP_around:V-N------------------------+ | | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | +--COMP_by:N-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) COMP_by:N-N (those,zinc) COMP_at:V-N (induced,positions) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_as:V-N (induced,those) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) SUBJ:V_PASS-N (induced,those) OBJ:V-N (induced,sites) COMP_around:V-N (induced,boxes) COMP_of:N-N (region,promoter) COMP_as:V-N (protected,those) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) Parse 43 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | +------------------------------------------MOD:V-ADV-----------------------------------------+ | +--------------------------------------COMP_at:V-N-------------------------------------+ | | +-------------------------COMP_around:V-N------------------------+ | | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | +-----COMP_by:N-N----+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) MOD:V-ADV (protected,as) MOD:V-ADV (induced,as) COMP_at:V-N (induced,positions) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:N-N (as,zinc) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (as,those) OBJ:V-N (induced,sites) COMP_around:V-N (induced,boxes) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) Parse 44 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | +------------------------------------------MOD:V-ADV-----------------------------------------+ | +--------------------------------------COMP_at:V-N-------------------------------------+ | | +-------------------------COMP_around:V-N------------------------+ | | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | +-----COMP_by:N-N----+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) MOD:V-ADV (protected,as) MOD:V-ADV (induced,as) COMP_at:V-N (induced,positions) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:N-N (as,zinc) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) OBJ:V-N (as,those) OBJ:V-N (induced,sites) COMP_around:V-N (induced,boxes) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) Parse 45 +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) COMP_as:V-N (protected,those) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_of:N-N (region,promoter) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 46 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | | +SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD:V-ADV (protected,as) COMP_of:N-N (region,sites) SUBJ:V-N (induced,those) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (demonstrated,studies) COMP_by:V-N (induced,zinc) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 47 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | +-----COMP_by:N-N----+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD:V-ADV (protected,as) COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (as,those) MOD_ATT:N-N (sites,DNase) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) COMP_by:N-N (as,zinc) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 48 +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +-------------------------------------------COMP_as:V-N-------------------------------------------+ | +--------------------------------------COMP_at:V-N-------------------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_as:V-N (protected,those) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_POST:N-ADJ (those,induced) OBJ:V-N (induced,sites) MOD_ATT:N-N (sites,DNase) COMP_as:V-N (induced,those) COMP_of:N-N (region,promoter) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) Parse 49 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +------------------------------------------MOD:V-ADV-----------------------------------------+ | +--------------------------------------COMP_at:V-N-------------------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | | +SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) SUBJ:V-N (induced,those) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_by:V-N (induced,zinc) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD:V-ADV (protected,as) OBJ:V-N (induced,sites) MOD_ATT:N-N (sites,DNase) COMP_of:N-N (region,promoter) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD:V-ADV (induced,as) MOD_ATT:N-ADJ (boxes,0A) Parse 50 +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +-------------------------------------------COMP_as:V-N-------------------------------------------+ | +--------------------------------------COMP_at:V-N-------------------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_as:V-N (protected,those) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) MOD_ATT:N-N (sites,DNase) COMP_as:V-N (induced,those) COMP_of:N-N (region,promoter) COMP_by:V_PASS-N (induced,zinc) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) Parse 51 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ | +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | | +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ | +-------------------------------------------COMP_as:V-N-------------------------------------------+ | | +--------------------------------------COMP_at:V-N-------------------------------------+ | | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_as:V-N (protected,those) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) COMP_as:V-N (induced,those) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) COMP_by:V-N (induced,zinc) COMP_of:N-N (region,promoter) COMP_by:V-N (protected,zinc) COMP_at:V-N (protected,positions) COMP_at:V-N (induced,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) Parse 52 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ | +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | | +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ | +------------------------------------------MOD:V-ADV-----------------------------------------+ | | +--------------------------------------COMP_at:V-N-------------------------------------+ | | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD:V-ADV (protected,as) OBJ:V-N (as,those) SUBJ:V_PASS-N (induced,those) OBJ:V-N (induced,sites) COMP_by:V-N (induced,zinc) COMP_of:N-N (region,promoter) COMP_by:V-N (protected,zinc) COMP_at:V-N (protected,positions) COMP_at:V-N (induced,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD:V-ADV (induced,as) MOD_ATT:N-ADJ (boxes,0A) Parse 53 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ | +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | | +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ | +------------------------------------------MOD:V-ADV-----------------------------------------+ | | +--------------------------------------COMP_at:V-N-------------------------------------+ | | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | | +SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,those) SUBJ:V-N (induced,GENEXXX) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD:V-ADV (protected,as) OBJ:V-N (induced,sites) COMP_by:V-N (induced,zinc) COMP_of:N-N (region,promoter) COMP_by:V-N (protected,zinc) COMP_at:V-N (protected,positions) COMP_at:V-N (induced,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD:V-ADV (induced,as) MOD_ATT:N-ADJ (boxes,0A) Parse 54 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +-------------------------------------OBJ:V-N-------------------------------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD:V-ADV (protected,as) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (as,those) OBJ:V-N (protected,sites) COMP_of:N-N (region,promoter) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 55 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +-------------------------------------OBJ:V-N-------------------------------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +OBJ:+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD:V-ADV (protected,as) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (as,those) OBJ:V-N (protected,sites) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 56 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | | +SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) SUBJ:V-N (induced,those) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) COMP_by:V-N (induced,zinc) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) MOD:V-ADV (protected,as) COMP_of:N-N (region,promoter) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 57 +--------------------------------------COMP_at:V-N-------------------------------------+ +-------------------------COMP_around:V-N------------------------+ | +---------------------------------------SUBJ:V-N---------------------------------------+-----------OBJ:V-N-----------+ | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (induced,positions) SUBJ:V-N (induced,studies) MOD_ATT:N-N (studies,protection) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 58 +--------------------------------------COMP_at:V-N-------------------------------------+ +-------------------------COMP_around:V-N------------------------+ | +---------------------------------------SUBJ:V-N---------------------------------------+-----------OBJ:V-N-----------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--SUBJ:V_PASS-N--+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (induced,positions) SUBJ:V-N (induced,studies) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (induced,sites) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 59 +------------------------------------------MOD:V-ADV-----------------------------------------+ +--------------------------------------COMP_at:V-N-------------------------------------+ | +-------------------------------------------------SUBJ:V-N-------------------------------------------------+-------------------------COMP_around:V-N------------------------+ | | +-----------SUBJ:V-N----------+ +-----------OBJ:V-N-----------+ | | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +OBJ:+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) COMP_by:ADJ-N (induced,zinc) SUBJ:V-N (demonstrated,DNase) SUBJ:V-N (induced,DNase) MOD:V-ADV (induced,as) COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_around:V-N (induced,boxes) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (induced,positions) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (region,large) OBJ:V-N (as,those) MOD_ATT:N-N (sites,DNase) OBJ:V-N (induced,sites) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) Parse 60 +-------------------------------------------COMP_as:V-N-------------------------------------------+ +--------------------------------------COMP_at:V-N-------------------------------------+ | +-------------------------------------------------SUBJ:V-N-------------------------------------------------+-------------------------COMP_around:V-N------------------------+ | | +-----------SUBJ:V-N----------+ +-----------OBJ:V-N-----------+ | | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V_PASS-N (induced,those) SUBJ:V-N (demonstrated,DNase) SUBJ:V-N (induced,DNase) COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_around:V-N (induced,boxes) COMP_as:V-N (induced,those) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (induced,positions) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) OBJ:V-N (induced,sites) SUBJ:V-N (studies,protection) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) Parse 61 +------------------------------------------MOD:V-ADV-----------------------------------------+ +--------------------------------------COMP_at:V-N-------------------------------------+ | +-------------------------COMP_around:V-N------------------------+ | | +---------------------------------------SUBJ:V-N---------------------------------------+-----------OBJ:V-N-----------+ | | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | +-----COMP_by:N-N----+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) MOD:V-ADV (induced,as) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (induced,positions) SUBJ:V-N (induced,studies) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (as,those) MOD_ATT:N-N (sites,DNase) OBJ:V-N (induced,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:N-N (as,zinc) MOD_ATT:N-ADJ (boxes,0A) Parse 62 +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ +------------------------------------------MOD:V-ADV-----------------------------------------+ | +--------------------------------------COMP_at:V-N-------------------------------------+ | | +---------------------------------------SUBJ:V-N---------------------------------------+-----------OBJ:V-N-----------+ | | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) MOD:V-ADV (induced,as) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (induced,positions) SUBJ:V-N (induced,studies) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (as,those) MOD_ATT:N-N (sites,DNase) OBJ:V-N (induced,sites) COMP_by:V-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) Parse 63 +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ +------------------------------------------MOD:V-ADV-----------------------------------------+ | +--------------------------------------COMP_at:V-N-------------------------------------+ | | +-------------------------------------------------SUBJ:V-N-------------------------------------------------+-------------------------COMP_around:V-N------------------------+ | | | +-----------SUBJ:V-N----------+ +-----------OBJ:V-N-----------+ | | | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) SUBJ:V_PASS-N (induced,those) SUBJ:V-N (induced,DNase) MOD:V-ADV (induced,as) COMP_of:N-N (region,promoter) COMP_around:V-N (induced,boxes) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_by:V-N (induced,zinc) COMP_at:V-N (induced,positions) MOD_ATT:N-ADJ (region,large) OBJ:V-N (as,those) OBJ:V-N (induced,sites) MOD_ATT:N-N (sites,DNase) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) Parse 64 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ | +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (demonstrated,studies) COMP_as:V-N (protected,those) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) COMP_of:N-N (region,promoter) COMP_by:V-N (protected,zinc) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 65 +--------------------------------------COMP_at:V-N-------------------------------------+ +-------------------------COMP_around:V-N------------------------+ | +---------------------------------------SUBJ:V-N---------------------------------------+-----------OBJ:V-N-----------+ | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--SUBJ:V_PASS-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (induced,positions) SUBJ:V-N (induced,studies) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (induced,sites) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 66 +--------------------------------------COMP_at:V-N-------------------------------------+ +-------------------------COMP_around:V-N------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 67 +--------------------------------------COMP_at:V-N-------------------------------------+ +-------------------------COMP_around:V-N------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--SUBJ:V_PASS-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (induced,sites) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 68 +--------------------------------------COMP_at:V-N-------------------------------------+ +-------------------------COMP_around:V-N------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--SUBJ:V_PASS-N--+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (induced,sites) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 69 +-------------------------------------------COMP_as:V-N-------------------------------------------+ +--------------------------------------COMP_at:V-N-------------------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) SUBJ:V-N (demonstrated,studies) COMP_as:V-N (induced,those) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 70 +------------------------------------------MOD:V-ADV-----------------------------------------+ +--------------------------------------COMP_at:V-N-------------------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +OBJ:+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD:V-ADV (induced,as) COMP_of:N-N (region,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (as,those) OBJ:V-N (induced,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 71 +-------------------------------------------COMP_as:V-N-------------------------------------------+ +--------------------------------------COMP_at:V-N-------------------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) SUBJ:V-N (demonstrated,studies) COMP_as:V-N (induced,those) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 72 +-------------------------------------------COMP_as:V-N-------------------------------------------+ +--------------------------------------COMP_at:V-N-------------------------------------+ | +-------------------------COMP_around:V-N------------------------+ | | +-----------SUBJ:V-N----------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | +------OBJ:V-N------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) OBJ:V-N (studies,DNase) COMP_by:ADJ-N (induced,zinc) SUBJ:V-N (demonstrated,DNase) COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_around:V-N (induced,boxes) COMP_as:V-N (induced,those) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (induced,positions) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) OBJ:V-N (induced,sites) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) Parse 73 +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ +--------------------------------------COMP_at:V-N-------------------------------------+ | +-------------------------COMP_around:V-N------------------------+ | | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) SUBJ:V_PASS-N (induced,those) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) OBJ:V-N (induced,sites) COMP_by:V-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) Parse 74 +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ +--------------------------------------COMP_at:V-N-------------------------------------+ | +-------------------------COMP_around:V-N------------------------+ | | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) SUBJ:V_PASS-N (induced,those) COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) OBJ:V-N (induced,sites) COMP_by:V-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) Parse 75 +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ +------------------------------------------MOD:V-ADV-----------------------------------------+ | +--------------------------------------COMP_at:V-N-------------------------------------+ | | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | | +SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,those) SUBJ:V-N (induced,GENEXXX) MOD:V-ADV (induced,as) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) OBJ:V-N (induced,sites) COMP_by:V-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) Parse 76 +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ +------------------------------------------MOD:V-ADV-----------------------------------------+ | +--------------------------------------COMP_at:V-N-------------------------------------+ | | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | | +SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,those) SUBJ:V-N (induced,GENEXXX) MOD:V-ADV (induced,as) COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) OBJ:V-N (induced,sites) COMP_by:V-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) Parse 77 +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ +------------------------------------------MOD:V-ADV-----------------------------------------+ | +--------------------------------------COMP_at:V-N-------------------------------------+ | | +-------------------------COMP_around:V-N------------------------+ | | | +-----------SUBJ:V-N----------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | | +------OBJ:V-N------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) SUBJ:V_PASS-N (induced,those) MOD:V-ADV (induced,as) COMP_of:N-N (region,promoter) COMP_around:V-N (induced,boxes) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_by:V-N (induced,zinc) COMP_at:V-N (induced,positions) MOD_ATT:N-ADJ (region,large) OBJ:V-N (as,those) OBJ:V-N (induced,sites) MOD_ATT:N-N (sites,DNase) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) Parse 78 +--------------------------------------COMP_at:V-N-------------------------------------+ +-------------------------COMP_around:V-N------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 79 +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +----------------MOD_ATT:N-N---------------+ | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_POST:N-ADJ (those,induced) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 80 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +----------------MOD_ATT:N-N---------------+ | +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ +--MOD_POST:N-ADJ-+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_POST:N-ADJ (positions,induced) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 81 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | +--MOD_POST:N-ADJ-+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_POST:N-ADJ (positions,induced) COMP_of:N-N (region,sites) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 82 +------------------------------------------------------------COMP_at:V-N-----------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | | +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_at:V-N (protected,same) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (DNase,induced) Parse 83 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +----------------MOD_ATT:N-N---------------+ | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) COMP_as:N-N (positions,those) COMP_by:V_PASS-N (induced,zinc) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 84 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +----------------MOD_ATT:N-N---------------+ | +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) COMP_as:N-N (positions,those) SUBJ:V_PASS-N (induced,positions) COMP_by:V_PASS-N (induced,zinc) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 85 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (sites,hypersensitive) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 86 +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +-----------SUBJ:V-N----------+ | | +----------------MOD_ATT:N-N---------------+ | | +------OBJ:V-N------+ | +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) OBJ:V-N (studies,DNase) COMP_by:ADJ-N (induced,zinc) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) COMP_as:V-N (protected,those) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (region,large) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (studies,protection) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 87 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | | +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | | +--COMP_by:N-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) MOD:V-ADV (protected,as) OBJ:V-N (as,those) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 88 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ | | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | | | +----------------MOD_ATT:N-N---------------+ | | | +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-N (sites,promoter) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) COMP_as:V-N (protected,those) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) COMP_by:V-N (protected,zinc) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 89 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ | +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | | | +----------------MOD_ATT:N-N---------------+ | | | +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) COMP_as:V-N (protected,those) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) COMP_by:V-N (protected,zinc) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 90 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ | +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | | +---------------------------COMP_of:N-N---------------------------+ | | | | | | +----------------MOD_ATT:N-N---------------+ | | | | +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +--OBJ:V-N--+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD:V-ADV (protected,as) COMP_of:N-N (region,sites) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) OBJ:V-N (as,induced) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_by:V-N (protected,zinc) MOD_ATT:N-N (sites,DNase) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 91 +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) COMP_by:V_PASS-N (induced,zinc) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 92 +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +--SUBJ:V_PASS-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) SUBJ:V_PASS-N (induced,positions) COMP_by:V_PASS-N (induced,zinc) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 93 +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +--MOD_POST:N-ADJ-+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_POST:N-ADJ (positions,induced) COMP_of:N-N (region,sites) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 94 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | +--COMP_by:N-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 95 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | +--COMP_by:N-N--+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 96 +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +--------------------MOD_ATT:N-N-------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) COMP_as:N-N (positions,those) MOD_ATT:N-N (sites,GENEXXX) COMP_by:V_PASS-N (induced,zinc) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 97 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +-----------SUBJ:V-N----------+ +-------------------------------------OBJ:V-N-------------------------------------+ | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +--SUBJ:V_PASS-N--+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_around:V-N (protected,boxes) COMP_at:V-N (protected,positions) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (protected,sites) SUBJ:V-N (studies,protection) COMP_of:N-N (region,promoter) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 98 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +-------------------------------------OBJ:V-N-------------------------------------+ | +--------COMP_by:N-N-------+ +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +--SUBJ:V_PASS-N--+ | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_around:V-N (protected,boxes) COMP_at:V-N (protected,positions) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) COMP_by:N-N (positions,zinc) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (protected,sites) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 99 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +-----------SUBJ:V-N----------+ | +---------------------------COMP_of:N-N---------------------------+ | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) OBJ:V-N (studies,DNase) SUBJ:V_PASS-N (induced,those) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (studies,protection) COMP_of:N-N (region,promoter) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 100 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +-------------------------------------OBJ:V-N-------------------------------------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +--MOD_POST:N-ADJ-+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_POST:N-ADJ (positions,induced) COMP_around:V-N (protected,boxes) COMP_at:V-N (protected,positions) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,sites) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 101 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +-------------------------------------OBJ:V-N-------------------------------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +--MOD_POST:N-ADJ-+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_POST:N-ADJ (positions,induced) COMP_around:V-N (protected,boxes) COMP_at:V-N (protected,positions) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,sites) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 102 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +--------------------MOD_ATT:N-N-------------------+ | | | | | +----------------MOD_ATT:N-N---------------+ | +--------COMP_by:N-N-------+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | +--SUBJ:V_PASS-N--+ | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_by:N-N (positions,zinc) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 103 +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) COMP_as:V-N (protected,those) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_of:N-N (region,promoter) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 104 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +--------------------MOD_ATT:N-N-------------------+ | | | | | +----------------MOD_ATT:N-N---------------+ | | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +OBJ:+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (sites,promoter) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) MOD:V-ADV (protected,as) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-N (studies,protection) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (sites,hypersensitive) OBJ:V-N (as,those) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 105 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_by:V-N (protected,zinc) COMP_of:N-N (region,promoter) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 106 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V_PASS-N (induced,positions) COMP_by:V-N (protected,zinc) COMP_of:N-N (region,promoter) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 107 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) COMP_of:N-N (region,promoter) COMP_by:V-N (protected,zinc) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 108 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +-----------SUBJ:V-N----------+ +-------------------------------------OBJ:V-N-------------------------------------+ | | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_around:V-N (protected,boxes) COMP_at:V-N (protected,positions) OBJ:V-N (studies,DNase) SUBJ:V_PASS-N (induced,those) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) MOD:V-ADV (protected,as) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (region,large) OBJ:V-N (as,those) MOD_ATT:N-N (sites,DNase) OBJ:V-N (protected,sites) SUBJ:V-N (studies,protection) COMP_of:N-N (region,promoter) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 109 +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +--------------------MOD_ATT:N-N-------------------+ | | | | | +----------------MOD_ATT:N-N---------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) COMP_as:V-N (protected,those) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-N (sites,GENEXXX) COMP_by:V_PASS-N (induced,zinc) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 110 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | | | +--------------------MOD_ATT:N-N-------------------+ | | | | | | +----------------MOD_ATT:N-N---------------+ | | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | +--SUBJ:V_PASS-N--+ | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V_PASS-N (induced,positions) COMP_by:V-N (protected,zinc) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 111 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ | | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | | | +--------------------MOD_ATT:N-N-------------------+ | | | | | | +----------------MOD_ATT:N-N---------------+ | | | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-N (sites,promoter) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) MOD:V-ADV (protected,as) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (as,those) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-N (sites,GENEXXX) COMP_by:V-N (protected,zinc) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 112 +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +--MOD_POST:N-ADJ-+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_POST:N-ADJ (positions,induced) COMP_of:N-N (region,sites) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 113 +---------------------------COMP_of:N-N---------------------------+ +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:ADJ-N (induced,zinc) MOD_POST:N-ADJ (those,induced) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 114 +---------------------------COMP_of:N-N---------------------------+ +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) SUBJ:V_PASS-N (induced,positions) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 115 +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +-------------------------COMP_around:V-N------------------------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--MOD_POST:N-ADJ-+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_POST:N-ADJ (positions,induced) SUBJ:V-N (induced,GENEXXX) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_of:N-N (region,promoter) OBJ:V-N (induced,sites) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) Parse 116 +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +-------------------------COMP_around:V-N------------------------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_of:N-N (region,promoter) OBJ:V-N (induced,sites) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) Parse 117 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +--------------------------------------COMP_at:V-N-------------------------------------+ | +-------------------------COMP_around:V-N------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | +--COMP_by:N-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) MOD_ATT:N-N (sites,DNase) COMP_of:N-N (region,promoter) COMP_at:V-N (induced,positions) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) Parse 118 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) SUBJ:V_PASS-N (induced,positions) COMP_by:V_PASS-N (induced,zinc) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 119 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +--------------------------------------COMP_at:V-N-------------------------------------+ | +-------------------------COMP_around:V-N------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | +--------COMP_by:N-N-------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--SUBJ:V_PASS-N--+ | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_by:N-N (positions,zinc) OBJ:V-N (induced,sites) SUBJ:V_PASS-N (induced,positions) MOD_ATT:N-N (sites,DNase) COMP_of:N-N (region,promoter) COMP_at:V-N (induced,positions) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) Parse 120 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +--------------------------------------COMP_at:V-N-------------------------------------+ | +-------------------------COMP_around:V-N------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | +--------COMP_by:N-N-------+ +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--SUBJ:V_PASS-N--+ | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_by:N-N (positions,zinc) OBJ:V-N (induced,sites) SUBJ:V_PASS-N (induced,positions) MOD_ATT:N-N (sites,DNase) COMP_of:N-N (region,promoter) COMP_at:V-N (induced,positions) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) Parse 121 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +-----------SUBJ:V-N----------+ | +---------------------------COMP_of:N-N---------------------------+ | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +--MOD_POST:N-ADJ-+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_POST:N-ADJ (positions,induced) COMP_of:N-N (region,sites) OBJ:V-N (studies,DNase) COMP_by:ADJ-N (induced,zinc) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (studies,protection) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 122 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_POST:N-ADJ (those,induced) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 123 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +--------------------------------------COMP_at:V-N-------------------------------------+ | +-------------------------COMP_around:V-N------------------------+ | +-----------SUBJ:V-N----------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | +------OBJ:V-N------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--MOD_POST:N-ADJ-+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_POST:N-ADJ (positions,induced) SUBJ:V-N (induced,GENEXXX) OBJ:V-N (studies,DNase) COMP_by:ADJ-N (induced,zinc) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-N (promoter,GENEXXX) COMP_around:V-N (induced,boxes) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) MOD_ATT:N-N (sites,DNase) SUBJ:V-N (studies,protection) COMP_of:N-N (region,promoter) COMP_at:V-N (induced,positions) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) Parse 124 +------------------------------------------------------------COMP_at:V-N-----------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +----------------------------------COMP_at:V-N---------------------------------+ | +-------------------------COMP_around:V-N------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) MOD_ATT:N-N (sites,DNase) COMP_at:V-N (protected,same) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) COMP_at:V-N (induced,same) COMP_around:V-N (protected,boxes) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (boxes,0A) Parse 125 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) SUBJ:V_PASS-N (induced,positions) COMP_by:V_PASS-N (induced,zinc) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 126 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +--------------------------------------COMP_at:V-N-------------------------------------+ | +-------------------------COMP_around:V-N------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--------COMP_by:N-N-------+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (promoter,GENEXXX) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_by:N-N (positions,zinc) OBJ:V-N (induced,sites) MOD_ATT:N-N (sites,DNase) COMP_of:N-N (region,promoter) COMP_at:V-N (induced,positions) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) Parse 127 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | +--------COMP_by:N-N-------+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +--SUBJ:V_PASS-N--+ | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_by:N-N (positions,zinc) SUBJ:V_PASS-N (induced,positions) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 128 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | +------------------------------------------MOD:V-ADV-----------------------------------------+ | +--------------------------------------COMP_at:V-N-------------------------------------+ | | +-------------------------COMP_around:V-N------------------------+ | | +-----------SUBJ:V-N----------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | +------OBJ:V-N------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | +--COMP_by:N-N--+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) MOD:V-ADV (protected,as) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) MOD:V-ADV (induced,as) COMP_at:V-N (induced,positions) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-ADJ (region,large) OBJ:V-N (as,those) COMP_by:N-N (those,zinc) OBJ:V-N (induced,sites) COMP_around:V-N (induced,boxes) SUBJ:V-N (studies,protection) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) Parse 129 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | +------------------------------------------MOD:V-ADV-----------------------------------------+ | +--------------------------------------COMP_at:V-N-------------------------------------+ | | +-------------------------COMP_around:V-N------------------------+ | | +-----------SUBJ:V-N----------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | +------OBJ:V-N------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | +-----COMP_by:N-N----+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) MOD:V-ADV (protected,as) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) MOD:V-ADV (induced,as) COMP_at:V-N (induced,positions) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:N-N (as,zinc) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-ADJ (region,large) OBJ:V-N (as,those) OBJ:V-N (induced,sites) COMP_around:V-N (induced,boxes) SUBJ:V-N (studies,protection) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) Parse 130 +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | +--COMP_by:N-N--+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) COMP_of:N-N (region,promoter) COMP_as:V-N (protected,those) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 131 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +-----------SUBJ:V-N----------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +--COMP_by:N-N--+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD:V-ADV (protected,as) COMP_of:N-N (region,sites) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-ADJ (region,large) OBJ:V-N (as,those) MOD_ATT:N-N (sites,DNase) SUBJ:V-N (studies,protection) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 132 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +------------------------------------------------------------COMP_at:V-N-----------------------------------------------------------+ | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) COMP_at:V-N (protected,same) COMP_of:N-N (region,promoter) COMP_by:V-N (protected,zinc) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 133 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +-------------------------------------------------------------------------COMP_as:V-N------------------------------------------------------------------------+ | +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | | +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ | +-----------------------------------------------COMP_as:V-N----------------------------------------------+ | | +--------------------------------------COMP_at:V-N-------------------------------------+ | | | +-------------------------COMP_around:V-N------------------------+ | | | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_as:V-N (induced,induced) SUBJ:V-N (induced,GENEXXX) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) OBJ:V-N (induced,sites) MOD_ATT:N-ADJ (boxes,0A) COMP_at:V-N (induced,positions) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_by:V-N (protected,zinc) COMP_as:V-N (protected,induced) COMP_by:V-N (induced,zinc) COMP_of:N-N (region,promoter) COMP_around:V-N (induced,boxes) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) Parse 134 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ | +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | | +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ | +------------------------------------------MOD:V-ADV-----------------------------------------+ | | +--------------------------------------COMP_at:V-N-------------------------------------+ | | | +-------------------------COMP_around:V-N------------------------+ | | | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +--OBJ:V-N--+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) MOD:V-ADV (protected,as) MOD:V-ADV (induced,as) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (as,induced) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) OBJ:V-N (induced,sites) MOD_ATT:N-ADJ (boxes,0A) COMP_at:V-N (induced,positions) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_by:V-N (protected,zinc) COMP_by:V-N (induced,zinc) COMP_of:N-N (region,promoter) COMP_around:V-N (induced,boxes) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) Parse 135 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +-------------------------------------------------------------------------COMP_as:V-N------------------------------------------------------------------------+ | +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | | +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ | +-----------------------------------------------COMP_as:V-N----------------------------------------------+ | | +--------------------------------------COMP_at:V-N-------------------------------------+ | | | +-------------------------COMP_around:V-N------------------------+ | | | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_as:V-N (induced,induced) SUBJ:V-N (induced,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) OBJ:V-N (induced,sites) MOD_ATT:N-ADJ (boxes,0A) COMP_at:V-N (induced,positions) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_by:V-N (protected,zinc) COMP_as:V-N (protected,induced) COMP_by:V-N (induced,zinc) COMP_of:N-N (region,promoter) COMP_around:V-N (induced,boxes) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) Parse 136 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ | +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD:V-ADV (protected,as) OBJ:V-N (as,those) MOD_ATT:N-N (sites,DNase) COMP_of:N-N (region,promoter) COMP_by:V-N (protected,zinc) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 137 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +--------------------------------------COMP_at:V-N-------------------------------------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_of:N-N (region,promoter) OBJ:V-N (induced,sites) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) Parse 138 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +--------------------------------------COMP_at:V-N-------------------------------------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_of:N-N (region,promoter) OBJ:V-N (induced,sites) COMP_by:V_PASS-N (induced,zinc) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) Parse 139 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +--------------------------------------COMP_at:V-N-------------------------------------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +--MOD_POST:N-ADJ-+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_POST:N-ADJ (positions,induced) SUBJ:V-N (induced,GENEXXX) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_of:N-N (region,promoter) OBJ:V-N (induced,sites) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) Parse 140 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ | +--------------------------------------COMP_at:V-N-------------------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_by:V-N (induced,zinc) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) SUBJ:V_PASS-N (induced,positions) MOD_ATT:N-N (sites,DNase) COMP_by:V-N (protected,zinc) COMP_of:N-N (region,promoter) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) Parse 141 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ | +--------------------------------------COMP_at:V-N-------------------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_by:V-N (induced,zinc) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) SUBJ:V_PASS-N (induced,positions) MOD_ATT:N-N (sites,DNase) COMP_by:V-N (protected,zinc) COMP_of:N-N (region,promoter) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) Parse 142 +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +-------------------------------------OBJ:V-N-------------------------------------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,sites) COMP_of:N-N (region,promoter) COMP_by:V_PASS-N (induced,zinc) COMP_as:V-N (protected,those) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 143 +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +-----------SUBJ:V-N----------+ +-------------------------------------OBJ:V-N-------------------------------------+ | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V_PASS-N (induced,those) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,sites) SUBJ:V-N (studies,protection) COMP_of:N-N (region,promoter) COMP_by:V_PASS-N (induced,zinc) COMP_as:V-N (protected,those) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 144 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ | +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +-----------SUBJ:V-N----------+ +-------------------------------------OBJ:V-N-------------------------------------+ | | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD:V-ADV (protected,as) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-ADJ (region,large) OBJ:V-N (as,those) MOD_ATT:N-N (sites,DNase) COMP_by:V-N (protected,zinc) OBJ:V-N (protected,sites) SUBJ:V-N (studies,protection) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 145 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ | | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | | +SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,those) COMP_of:N-N (region,sites) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) MOD:V-ADV (protected,as) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) COMP_by:V-N (protected,zinc) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 146 +--------------------------------------COMP_at:V-N-------------------------------------+ +---------------------------------------SUBJ:V-N---------------------------------------+-----------OBJ:V-N-----------+ | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) COMP_of:N-N (region,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) COMP_at:V-N (induced,positions) SUBJ:V-N (induced,studies) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) OBJ:V-N (induced,sites) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 147 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | | +SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) SUBJ:V-N (induced,those) MOD_ATT:N-N (promoter,GENEXXX) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) COMP_by:V-N (induced,zinc) MOD:V-ADV (protected,as) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 148 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +OBJ:+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (sites,hypersensitive) MOD:V-ADV (protected,as) OBJ:V-N (as,those) COMP_of:N-N (region,promoter) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 149 +------------------------------------------MOD:V-ADV-----------------------------------------+ +-------------------------------------------------SUBJ:V-N-------------------------------------------------+--------------------------------------COMP_at:V-N-------------------------------------+ | +-----------SUBJ:V-N----------+ +-----------OBJ:V-N-----------+ | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V_PASS-N (induced,those) SUBJ:V-N (demonstrated,DNase) SUBJ:V-N (induced,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD:V-ADV (induced,as) COMP_of:N-N (region,promoter) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (induced,positions) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (as,those) OBJ:V-N (induced,sites) SUBJ:V-N (studies,protection) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 150 +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) COMP_as:V-N (protected,those) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_of:N-N (region,promoter) COMP_by:V_PASS-N (induced,zinc) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 151 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +-----COMP_by:N-N----+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) MOD:V-ADV (protected,as) OBJ:V-N (as,those) COMP_of:N-N (region,promoter) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) COMP_by:N-N (as,zinc) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 152 +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +--COMP_by:N-N--+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) COMP_as:V-N (protected,those) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_of:N-N (region,promoter) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 153 +------------------------------------------MOD:V-ADV-----------------------------------------+ +--------------------------------------COMP_at:V-N-------------------------------------+ | +---------------------------------------SUBJ:V-N---------------------------------------+-----------OBJ:V-N-----------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +-----COMP_by:N-N----+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) MOD:V-ADV (induced,as) COMP_of:N-N (region,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (induced,positions) SUBJ:V-N (induced,studies) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (as,those) OBJ:V-N (induced,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:N-N (as,zinc) MOD_ATT:N-N (sites,DNase) Parse 154 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_by:V-N (protected,zinc) COMP_of:N-N (region,promoter) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 155 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V_PASS-N (induced,positions) COMP_by:V-N (protected,zinc) COMP_of:N-N (region,promoter) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 156 +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ +----------------------------------COMP_at:V-N---------------------------------+ | +-------------------------COMP_around:V-N------------------------+ | | +---------------------------------------SUBJ:V-N---------------------------------------+-----------OBJ:V-N-----------+ | | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) SUBJ:V-N (induced,studies) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) COMP_at:V-N (induced,same) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) OBJ:V-N (induced,sites) COMP_by:V-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (boxes,0A) Parse 157 +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ +-----------------------------------------------COMP_as:V-N----------------------------------------------+ | +--------------------------------------COMP_at:V-N-------------------------------------+ | | +-------------------------COMP_around:V-N------------------------+ | | | +---------------------------------------SUBJ:V-N---------------------------------------+-----------OBJ:V-N-----------+ | | | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_as:V-N (induced,induced) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_by:V-N (induced,zinc) COMP_at:V-N (induced,positions) SUBJ:V-N (induced,studies) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) MOD_ATT:N-N (sites,DNase) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) Parse 158 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ | +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD:V-ADV (protected,as) OBJ:V-N (as,those) MOD_ATT:N-N (sites,DNase) COMP_of:N-N (region,promoter) COMP_by:V-N (protected,zinc) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 159 +---------------------------------------SUBJ:V-N---------------------------------------+-----------OBJ:V-N-----------+ +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) SUBJ:V-N (induced,studies) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) COMP_by:V_PASS-N (induced,zinc) SUBJ:V_PASS-N (induced,those) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) Parse 160 +---------------------------------------SUBJ:V-N---------------------------------------+-----------OBJ:V-N-----------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) SUBJ:V-N (induced,studies) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (induced,sites) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) Parse 161 +--------------------------------------COMP_at:V-N-------------------------------------+ +---------------------------------------SUBJ:V-N---------------------------------------+-----------OBJ:V-N-----------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:ADJ-N (induced,zinc) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) COMP_at:V-N (induced,positions) SUBJ:V-N (induced,studies) MOD_ATT:N-N (studies,protection) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) OBJ:V-N (induced,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 162 +--------------------------------------COMP_at:V-N-------------------------------------+ +-------------------------------------------------SUBJ:V-N-------------------------------------------------+-------------------------COMP_around:V-N------------------------+ | +-----------SUBJ:V-N----------+ +-----------OBJ:V-N-----------+ | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V_PASS-N (induced,those) SUBJ:V-N (demonstrated,DNase) SUBJ:V-N (induced,DNase) MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) COMP_around:V-N (induced,boxes) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (induced,positions) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) SUBJ:V-N (studies,protection) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 163 +--------------------------------------COMP_at:V-N-------------------------------------+ +-------------------------COMP_around:V-N------------------------+ | +---------------------------------------SUBJ:V-N---------------------------------------+-----------OBJ:V-N-----------+ | +--------COMP_by:N-N-------+ +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--SUBJ:V_PASS-N--+ | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (induced,positions) SUBJ:V-N (induced,studies) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) COMP_by:N-N (positions,zinc) OBJ:V-N (induced,sites) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 164 +--------------------------------------COMP_at:V-N-------------------------------------+ +-------------------------COMP_around:V-N------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--------COMP_by:N-N-------+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) COMP_by:N-N (positions,zinc) OBJ:V-N (induced,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 165 +--------------------------------------COMP_at:V-N-------------------------------------+ +-------------------------COMP_around:V-N------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | +--------COMP_by:N-N-------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--SUBJ:V_PASS-N--+ | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) COMP_by:N-N (positions,zinc) OBJ:V-N (induced,sites) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 166 +------------------------------------------MOD:V-ADV-----------------------------------------+ +--------------------------------------COMP_at:V-N-------------------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +-----COMP_by:N-N----+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) MOD:V-ADV (induced,as) COMP_of:N-N (region,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (as,those) OBJ:V-N (induced,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:N-N (as,zinc) MOD_ATT:N-N (sites,DNase) Parse 167 +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ +--------------------------------------COMP_at:V-N-------------------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) COMP_by:V-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 168 +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ +--------------------------------------COMP_at:V-N-------------------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) COMP_by:V-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 169 +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ +--------------------------------------COMP_at:V-N-------------------------------------+ | +-------------------------COMP_around:V-N------------------------+ | | +-----------SUBJ:V-N----------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | +------OBJ:V-N------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--SUBJ:V_PASS-N--+ | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_around:V-N (induced,boxes) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (induced,positions) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) OBJ:V-N (induced,sites) SUBJ:V_PASS-N (induced,positions) SUBJ:V-N (studies,protection) COMP_by:V-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) Parse 170 +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ +------------------------------------------MOD:V-ADV-----------------------------------------+ | +--------------------------------------COMP_at:V-N-------------------------------------+ | | +-------------------------COMP_around:V-N------------------------+ | | | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +--OBJ:V-N--+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) MOD:V-ADV (induced,as) COMP_of:N-N (region,promoter) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) OBJ:V-N (as,induced) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_by:V-N (induced,zinc) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) MOD_ATT:N-N (sites,DNase) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) Parse 171 +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ +-----------------------------------------------COMP_as:V-N----------------------------------------------+ | +--------------------------------------COMP_at:V-N-------------------------------------+ | | +-------------------------COMP_around:V-N------------------------+ | | | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_as:V-N (induced,induced) SUBJ:V-N (induced,GENEXXX) COMP_of:N-N (region,promoter) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_by:V-N (induced,zinc) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) MOD_ATT:N-N (sites,DNase) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) Parse 172 +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (induced,sites) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) Parse 173 +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (induced,sites) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) Parse 174 +--------------------------------------COMP_at:V-N-------------------------------------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) SUBJ:V_PASS-N (induced,those) COMP_of:N-N (region,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) OBJ:V-N (induced,sites) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 175 +--------------------------------------COMP_at:V-N-------------------------------------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (induced,sites) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 176 +-------------------------COMP_around:V-N------------------------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) COMP_by:ADJ-N (induced,zinc) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) OBJ:V-N (induced,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 177 +--------------------------------------COMP_at:V-N-------------------------------------+ +-------------------------COMP_around:V-N------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | +--COMP_by:N-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 178 +--------------------------------------COMP_at:V-N-------------------------------------+ +-------------------------COMP_around:V-N------------------------+ | +-----------SUBJ:V-N----------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | +------OBJ:V-N------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) OBJ:V-N (studies,DNase) COMP_by:ADJ-N (induced,zinc) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) COMP_around:V-N (induced,boxes) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (induced,positions) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 179 +--------------------------------------COMP_at:V-N-------------------------------------+ +-------------------------COMP_around:V-N------------------------+ | +-----------SUBJ:V-N----------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | +------OBJ:V-N------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--MOD_POST:N-ADJ-+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_POST:N-ADJ (positions,induced) SUBJ:V-N (induced,GENEXXX) OBJ:V-N (studies,DNase) COMP_by:ADJ-N (induced,zinc) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) COMP_around:V-N (induced,boxes) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (induced,positions) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 180 +---------------------------COMP_of:N-N---------------------------+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_by:V_PASS-N (induced,zinc) SUBJ:V_PASS-N (induced,those) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 181 +---------------------------COMP_of:N-N---------------------------+ +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--MOD_POST:N-ADJ-+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:ADJ-N (induced,zinc) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_POST:N-ADJ (positions,induced) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 182 +---------------------------COMP_of:N-N---------------------------+ | +----------------MOD_ATT:N-N---------------+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_as:N-N (positions,those) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) SUBJ:V_PASS-N (induced,positions) COMP_of:N-N (region,sites) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 183 +---------------------------COMP_of:N-N---------------------------+ | +----------------MOD_ATT:N-N---------------+ +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:ADJ-N (induced,zinc) MOD_POST:N-ADJ (those,induced) COMP_as:N-N (positions,those) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_of:N-N (region,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 184 +---------------------------COMP_of:N-N---------------------------+ | +----------------MOD_ATT:N-N---------------+ +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_as:N-N (positions,those) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_of:N-N (region,sites) COMP_by:V_PASS-N (induced,zinc) SUBJ:V_PASS-N (induced,those) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 185 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +----------------MOD_ATT:N-N---------------+ | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | +--COMP_by:N-N--+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 186 +---------------------------COMP_of:N-N---------------------------+ | +----------------MOD_ATT:N-N---------------+ +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_as:N-N (positions,those) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) SUBJ:V_PASS-N (induced,positions) COMP_of:N-N (region,sites) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 187 +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +----------------MOD_ATT:N-N---------------+ | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | +--COMP_by:N-N--+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 188 +---------------------------COMP_of:N-N---------------------------+ | +----------------MOD_ATT:N-N---------------+ +--------COMP_by:N-N-------+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:N-N (positions,zinc) COMP_as:N-N (positions,those) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 189 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | +--------COMP_by:N-N-------+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_by:N-N (positions,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 190 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | +--------COMP_by:N-N-------+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | +--SUBJ:V_PASS-N--+ | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_by:N-N (positions,zinc) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 191 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +----------------MOD_ATT:N-N---------------+ +--------COMP_by:N-N-------+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) COMP_as:N-N (positions,those) COMP_by:N-N (positions,zinc) SUBJ:V_PASS-N (induced,positions) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 192 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | | +--COMP_by:N-N--+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 193 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +-----------SUBJ:V-N----------+ | | +----------------MOD_ATT:N-N---------------+ | | +------OBJ:V-N------+ | +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | +--SUBJ:V_PASS-N--+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V_PASS-N (induced,positions) SUBJ:V-N (studies,protection) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 194 +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | | +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | +--COMP_by:N-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) COMP_as:V-N (protected,those) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 195 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | | | +----------------MOD_ATT:N-N---------------+ | | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) COMP_by:V-N (protected,zinc) COMP_as:N-N (positions,induced) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 196 +----------------------------------------------------------------SUBJ:V_PASS-N---------------------------------------------------------------+ +-------------------------------------------------------------COMP_as:N-N-------------------------------------------------------------+ | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | | | +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | | +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:N-N (region,positions) COMP_as:N-N (region,those) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) COMP_of:N-N (region,sites) COMP_by:V_PASS-N (induced,zinc) SUBJ:V_PASS-N (induced,region) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 197 +---------------------------COMP_of:N-N---------------------------+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:ADJ-N (induced,zinc) MOD_POST:N-ADJ (those,induced) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 198 +---------------------------COMP_of:N-N---------------------------+ | +--------------------MOD_ATT:N-N-------------------+ | | +----------------MOD_ATT:N-N---------------+ +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:ADJ-N (induced,zinc) MOD_POST:N-ADJ (those,induced) COMP_as:N-N (positions,those) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,GENEXXX) COMP_of:N-N (region,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 199 +---------------------------COMP_of:N-N---------------------------+ | +--------------------MOD_ATT:N-N-------------------+ | | +----------------MOD_ATT:N-N---------------+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ +--COMP_by:N-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) COMP_as:N-N (positions,those) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) COMP_by:N-N (those,zinc) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,GENEXXX) COMP_of:N-N (region,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 200 +---------------------------COMP_of:N-N---------------------------+ | +--------------------MOD_ATT:N-N-------------------+ | | +----------------MOD_ATT:N-N---------------+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_as:N-N (positions,those) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,GENEXXX) COMP_of:N-N (region,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 201 +---------------------------COMP_of:N-N---------------------------+ | +--------------------MOD_ATT:N-N-------------------+ | | +----------------MOD_ATT:N-N---------------+ +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_as:N-N (positions,those) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,GENEXXX) COMP_of:N-N (region,sites) COMP_by:V_PASS-N (induced,zinc) SUBJ:V_PASS-N (induced,those) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 202 +---------------------------COMP_of:N-N---------------------------+ | +--------------------MOD_ATT:N-N-------------------+ | | +----------------MOD_ATT:N-N---------------+ +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:N-N (positions,zinc) SUBJ:V_PASS-N (induced,those) COMP_as:N-N (positions,those) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,GENEXXX) COMP_of:N-N (region,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 203 +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ +-------------------------------------OBJ:V-N-------------------------------------+ | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_around:V-N (protected,boxes) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_POST:N-ADJ (those,induced) COMP_as:N-N (positions,those) OBJ:V-N (protected,sites) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 204 +---------------------------COMP_of:N-N---------------------------+ | +--------------------MOD_ATT:N-N-------------------+ | | +----------------MOD_ATT:N-N---------------+ +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ +--MOD_POST:N-ADJ-+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:ADJ-N (induced,zinc) COMP_as:N-N (positions,those) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_POST:N-ADJ (positions,induced) MOD_ATT:N-N (sites,GENEXXX) COMP_of:N-N (region,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 205 +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ +-------------------------------------OBJ:V-N-------------------------------------+ | +--------COMP_by:N-N-------+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +--SUBJ:V_PASS-N--+ | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_around:V-N (protected,boxes) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) COMP_by:N-N (positions,zinc) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (protected,sites) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 206 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +--------------------MOD_ATT:N-N-------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_POST:N-ADJ (those,induced) COMP_as:N-N (positions,those) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 207 +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +--------------------MOD_ATT:N-N-------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-N (sites,GENEXXX) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 208 +---------------------------COMP_of:N-N---------------------------+ | +--------------------MOD_ATT:N-N-------------------+ | | +----------------MOD_ATT:N-N---------------+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ +--MOD_POST:N-ADJ-+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:ADJ-N (induced,zinc) COMP_as:N-N (positions,those) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_POST:N-ADJ (positions,induced) MOD_ATT:N-N (sites,GENEXXX) COMP_of:N-N (region,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 209 +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +--------------------MOD_ATT:N-N-------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | +--------COMP_by:N-N-------+ +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | +--SUBJ:V_PASS-N--+ | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) COMP_as:N-N (positions,those) COMP_by:N-N (positions,zinc) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V_PASS-N (induced,positions) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 210 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +--------------------MOD_ATT:N-N-------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) COMP_as:N-N (positions,those) MOD_ATT:N-N (sites,GENEXXX) COMP_by:V_PASS-N (induced,zinc) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 211 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +--------------------MOD_ATT:N-N-------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) COMP_as:N-N (positions,those) COMP_by:N-N (positions,zinc) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 212 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--MOD_POST:N-ADJ-+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_POST:N-ADJ (positions,induced) COMP_of:N-N (region,sites) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 213 +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ +---------------------------COMP_of:N-N---------------------------+ | | +--------------------MOD_ATT:N-N-------------------+ | | | +----------------MOD_ATT:N-N---------------+ | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ +--MOD_POST:N-ADJ-+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_POST:N-ADJ (positions,induced) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_at:N-N (region,positions) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) MOD_ATT:N-N (sites,GENEXXX) COMP_of:N-N (region,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 214 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +--------------------MOD_ATT:N-N-------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ +--MOD_POST:N-ADJ-+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_POST:N-ADJ (positions,induced) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) COMP_as:N-N (positions,those) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 215 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +--------------------MOD_ATT:N-N-------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_POST:N-ADJ (those,induced) COMP_as:N-N (positions,those) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 216 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +--------------------MOD_ATT:N-N-------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ +--MOD_POST:N-ADJ-+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_POST:N-ADJ (positions,induced) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) COMP_as:N-N (positions,those) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 217 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +--------------------MOD_ATT:N-N-------------------+ | | | | +----------------MOD_ATT:N-N---------------+ +--------COMP_by:N-N-------+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) COMP_as:N-N (positions,those) COMP_by:N-N (positions,zinc) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V_PASS-N (induced,positions) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 218 +------------------------------------------------------------COMP_at:V-N-----------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +--------------------MOD_ATT:N-N-------------------+ | | | | | +----------------MOD_ATT:N-N---------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-N (sites,GENEXXX) COMP_at:V-N (protected,same) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (DNase,induced) Parse 219 +-------------------------------------------------------------COMP_as:N-N-------------------------------------------------------------+ +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +--------------------MOD_ATT:N-N-------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:N-N (region,positions) COMP_as:N-N (region,those) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,GENEXXX) COMP_of:N-N (region,sites) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 220 +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +--------------------MOD_ATT:N-N-------------------+ | | | | | +----------------MOD_ATT:N-N---------------+ | | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | +--COMP_by:N-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (sites,promoter) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) COMP_as:V-N (protected,those) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 221 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +-----------SUBJ:V-N----------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | +-----COMP_by:N-N----+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD:V-ADV (protected,as) COMP_of:N-N (region,sites) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-ADJ (region,large) OBJ:V-N (as,those) MOD_ATT:N-N (sites,DNase) SUBJ:V-N (studies,protection) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) COMP_by:N-N (as,zinc) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 222 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +--------------------MOD_ATT:N-N-------------------+ | | | | | +----------------MOD_ATT:N-N---------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V_PASS-N (induced,positions) COMP_by:V-N (protected,zinc) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 223 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +-------------------------------------------------------------------------COMP_as:V-N------------------------------------------------------------------------+ | +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | | | +--------------------MOD_ATT:N-N-------------------+ | | | | | | +----------------MOD_ATT:N-N---------------+ | | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) COMP_as:V-N (protected,induced) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-N (sites,GENEXXX) COMP_by:V-N (protected,zinc) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 224 +---------------------------COMP_of:N-N---------------------------+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--MOD_POST:N-ADJ-+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:ADJ-N (induced,zinc) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_POST:N-ADJ (positions,induced) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 225 +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +--COMP_by:N-N--+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 226 +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ +-----------SUBJ:V-N----------+ | +---------------------------COMP_of:N-N---------------------------+ | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +--MOD_POST:N-ADJ-+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_POST:N-ADJ (positions,induced) COMP_of:N-N (region,sites) OBJ:V-N (studies,DNase) COMP_by:ADJ-N (induced,zinc) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) SUBJ:V-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 227 +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +-------------------------COMP_around:V-N------------------------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--COMP_by:N-N--+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_of:N-N (region,promoter) OBJ:V-N (induced,sites) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) Parse 228 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +-----------SUBJ:V-N----------+ | +---------------------------COMP_of:N-N---------------------------+ | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) OBJ:V-N (studies,DNase) SUBJ:V_PASS-N (induced,those) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) SUBJ:V-N (studies,protection) COMP_by:V_PASS-N (induced,zinc) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 229 +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +-------------------------COMP_around:V-N------------------------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--------COMP_by:N-N-------+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_of:N-N (region,promoter) COMP_by:N-N (positions,zinc) OBJ:V-N (induced,sites) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) Parse 230 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +--------------------------------------COMP_at:V-N-------------------------------------+ | +-------------------------COMP_around:V-N------------------------+ | +-----------SUBJ:V-N----------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | +------OBJ:V-N------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--------COMP_by:N-N-------+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (promoter,GENEXXX) COMP_around:V-N (induced,boxes) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-ADJ (region,large) COMP_by:N-N (positions,zinc) OBJ:V-N (induced,sites) MOD_ATT:N-N (sites,DNase) SUBJ:V-N (studies,protection) COMP_of:N-N (region,promoter) COMP_at:V-N (induced,positions) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) Parse 231 +------------------------------------------------------------COMP_at:V-N-----------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) COMP_at:V-N (protected,same) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) COMP_of:N-N (region,promoter) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 232 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) COMP_by:N-N (positions,zinc) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 233 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +--------------------------------------COMP_at:V-N-------------------------------------+ | +-------------------------COMP_around:V-N------------------------+ | +-----------SUBJ:V-N----------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | +--------COMP_by:N-N-------+ +------OBJ:V-N------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--SUBJ:V_PASS-N--+ | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-N (promoter,GENEXXX) COMP_around:V-N (induced,boxes) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-ADJ (region,large) COMP_by:N-N (positions,zinc) OBJ:V-N (induced,sites) SUBJ:V_PASS-N (induced,positions) MOD_ATT:N-N (sites,DNase) SUBJ:V-N (studies,protection) COMP_of:N-N (region,promoter) COMP_at:V-N (induced,positions) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) Parse 234 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +--------COMP_by:N-N-------+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_by:N-N (positions,zinc) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 235 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) COMP_by:V_PASS-N (induced,zinc) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 236 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +--COMP_by:N-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 237 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +-----------SUBJ:V-N----------+ | +---------------------------COMP_of:N-N---------------------------+ | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | +--COMP_by:N-N--+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (studies,protection) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 238 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +-----------SUBJ:V-N----------+ | +---------------------------COMP_of:N-N---------------------------+ | +--------COMP_by:N-N-------+ +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +--SUBJ:V_PASS-N--+ | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_by:N-N (positions,zinc) SUBJ:V_PASS-N (induced,positions) SUBJ:V-N (studies,protection) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 239 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ | +--------------------------------------COMP_at:V-N-------------------------------------+ | | +-------------------------COMP_around:V-N------------------------+ | | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) COMP_at:V-N (induced,positions) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) COMP_around:V-N (induced,boxes) COMP_by:V-N (induced,zinc) COMP_of:N-N (region,promoter) COMP_by:V-N (protected,zinc) COMP_as:N-N (positions,induced) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) Parse 240 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +-----COMP_by:N-N----+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) MOD:V-ADV (protected,as) OBJ:V-N (as,those) COMP_of:N-N (region,promoter) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) COMP_by:N-N (as,zinc) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 241 +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +--COMP_by:N-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) COMP_as:V-N (protected,those) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_of:N-N (region,promoter) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 242 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +-------------------------------------------------------------------------COMP_as:V-N------------------------------------------------------------------------+ | +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (demonstrated,studies) COMP_as:V-N (protected,induced) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) COMP_of:N-N (region,promoter) COMP_by:V-N (protected,zinc) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 243 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +-------------------------------------------------------------------------COMP_as:V-N------------------------------------------------------------------------+ | +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | | +---------------------------COMP_of:N-N---------------------------+ | | | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_by:V-N (protected,zinc) MOD_ATT:N-N (sites,DNase) COMP_as:V-N (protected,induced) MOD_ATT:N-ADJ (DNase,induced) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) COMP_around:V-N (protected,boxes) Parse 244 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ | +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | | +---------------------------COMP_of:N-N---------------------------+ | | | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +--OBJ:V-N--+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD:V-ADV (protected,as) COMP_of:N-N (region,sites) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) OBJ:V-N (as,induced) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_by:V-N (protected,zinc) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) Parse 245 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +-------------------------------------------------------------------------COMP_as:V-N------------------------------------------------------------------------+ | +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | | +---------------------------COMP_of:N-N---------------------------+ | | | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_by:V-N (protected,zinc) MOD_ATT:N-N (sites,DNase) COMP_as:V-N (protected,induced) MOD_ATT:N-ADJ (DNase,induced) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) COMP_around:V-N (protected,boxes) Parse 246 +------------------------------------------------------------COMP_at:V-N-----------------------------------------------------------+ | +----------------------------------COMP_at:V-N---------------------------------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) COMP_at:V-N (protected,same) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) COMP_at:V-N (induced,same) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_of:N-N (region,promoter) OBJ:V-N (induced,sites) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_as:N-N (positions,those) Parse 247 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +--------------------------------------COMP_at:V-N-------------------------------------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_of:N-N (region,promoter) COMP_by:N-N (positions,zinc) OBJ:V-N (induced,sites) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) Parse 248 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ | +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | | +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ | +------------------------------------------MOD:V-ADV-----------------------------------------+ | | +--------------------------------------COMP_at:V-N-------------------------------------+ | | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +--OBJ:V-N--+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) OBJ:V-N (as,induced) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD:V-ADV (protected,as) OBJ:V-N (induced,sites) COMP_by:V-N (induced,zinc) COMP_of:N-N (region,promoter) COMP_by:V-N (protected,zinc) COMP_at:V-N (protected,positions) COMP_at:V-N (induced,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD:V-ADV (induced,as) MOD_ATT:N-ADJ (boxes,0A) Parse 249 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +-----------SUBJ:V-N----------+ +-------------------------------------OBJ:V-N-------------------------------------+ | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +OBJ:+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD:V-ADV (protected,as) OBJ:V-N (studies,DNase) COMP_by:ADJ-N (induced,zinc) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (as,those) OBJ:V-N (protected,sites) SUBJ:V-N (studies,protection) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 250 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ | +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +-----------SUBJ:V-N----------+ +-------------------------------------OBJ:V-N-------------------------------------+ | | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | | +SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,those) MOD:V-ADV (protected,as) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) COMP_by:V-N (protected,zinc) OBJ:V-N (protected,sites) SUBJ:V-N (studies,protection) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 251 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ +--------COMP_by:N-N-------+ +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) COMP_by:N-N (positions,zinc) SUBJ:V_PASS-N (induced,positions) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 252 +---------------------------------------------------------------MOD_POST:N-ADJ---------------------------------------------------------------+ +-------------------------------------------------------------COMP_as:N-N-------------------------------------------------------------+ | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | | +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:ADJ-N (induced,zinc) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) MOD_POST:N-ADJ (region,induced) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) COMP_as:N-N (region,those) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 253 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ | +----------------------------------------------------------------SUBJ:V_PASS-N---------------------------------------------------------------+ | | +-------------------------------------------------------------COMP_as:N-N-------------------------------------------------------------+ | | | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | | | +---------------------------COMP_of:N-N---------------------------+ | | | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | | | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (region,those) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (sites,DNase) COMP_of:N-N (region,promoter) COMP_by:V-N (protected,zinc) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) SUBJ:V_PASS-N (induced,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 254 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) COMP_by:V_PASS-N (induced,zinc) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 255 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +--COMP_by:N-N--+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 256 +--------------------------------------COMP_at:V-N-------------------------------------+ +---------------------------------------SUBJ:V-N---------------------------------------+-----------OBJ:V-N-----------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--COMP_by:N-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) COMP_at:V-N (induced,positions) SUBJ:V-N (induced,studies) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) OBJ:V-N (induced,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 257 +-------------------------------------------------SUBJ:V-N-------------------------------------------------+--------------------------------------COMP_at:V-N-------------------------------------+ +-----------SUBJ:V-N----------+ +-----------OBJ:V-N-----------+ | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +--MOD_POST:N-ADJ-+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_POST:N-ADJ (positions,induced) OBJ:V-N (studies,DNase) COMP_by:ADJ-N (induced,zinc) SUBJ:V-N (demonstrated,DNase) SUBJ:V-N (induced,DNase) COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) COMP_at:V-N (induced,positions) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) OBJ:V-N (induced,sites) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 258 +--------------------------------------COMP_at:V-N-------------------------------------+ +---------------------------------------SUBJ:V-N---------------------------------------+-----------OBJ:V-N-----------+ +--------COMP_by:N-N-------+ +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) COMP_at:V-N (induced,positions) SUBJ:V-N (induced,studies) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) COMP_by:N-N (positions,zinc) OBJ:V-N (induced,sites) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 259 +----------------------------------------------------------------SUBJ:V_PASS-N---------------------------------------------------------------+ +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) COMP_by:V_PASS-N (induced,zinc) SUBJ:V_PASS-N (induced,region) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 260 +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) COMP_as:V-N (protected,those) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_of:N-N (region,promoter) COMP_by:V_PASS-N (induced,zinc) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 261 +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) COMP_as:V-N (protected,those) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 262 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_of:N-N (region,promoter) COMP_by:V-N (protected,zinc) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 263 +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ +----------------------------------COMP_at:V-N---------------------------------+ | +---------------------------------------SUBJ:V-N---------------------------------------+-----------OBJ:V-N-----------+ | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) SUBJ:V-N (induced,studies) MOD_ATT:N-N (studies,protection) COMP_at:V-N (induced,same) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) COMP_by:V-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) COMP_as:N-N (positions,those) Parse 264 +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ +-----------------------------------------------COMP_as:V-N----------------------------------------------+ | +--------------------------------------COMP_at:V-N-------------------------------------+ | | +---------------------------------------SUBJ:V-N---------------------------------------+-----------OBJ:V-N-----------+ | | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_as:V-N (induced,induced) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (induced,positions) SUBJ:V-N (induced,studies) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) OBJ:V-N (induced,sites) COMP_by:V-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) Parse 265 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ | +-------------------------------------------------------------COMP_as:N-N-------------------------------------------------------------+ | | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (region,those) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (sites,DNase) COMP_of:N-N (region,promoter) COMP_by:V-N (protected,zinc) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 266 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ | +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +--OBJ:V-N--+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (demonstrated,studies) OBJ:V-N (as,induced) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD:V-ADV (protected,as) MOD_ATT:N-N (sites,DNase) COMP_of:N-N (region,promoter) COMP_by:V-N (protected,zinc) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 267 +---------------------------------------SUBJ:V-N---------------------------------------+-----------OBJ:V-N-----------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:ADJ-N (induced,zinc) MOD_POST:N-ADJ (those,induced) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) SUBJ:V-N (induced,studies) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) Parse 268 +---------------------------------------SUBJ:V-N---------------------------------------+-----------OBJ:V-N-----------+ +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:N-N (positions,zinc) SUBJ:V_PASS-N (induced,those) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) SUBJ:V-N (induced,studies) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) Parse 269 +--------------------------------------COMP_at:V-N-------------------------------------+ +---------------------------------------SUBJ:V-N---------------------------------------+-----------OBJ:V-N-----------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) COMP_at:V-N (induced,positions) SUBJ:V-N (induced,studies) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) COMP_by:N-N (positions,zinc) OBJ:V-N (induced,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 270 +-------------------------------------------------SUBJ:V-N-------------------------------------------------+-------------------------COMP_around:V-N------------------------+ +-----------SUBJ:V-N----------+ +-----------OBJ:V-N-----------+ | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--MOD_POST:N-ADJ-+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_POST:N-ADJ (positions,induced) OBJ:V-N (studies,DNase) COMP_by:ADJ-N (induced,zinc) SUBJ:V-N (demonstrated,DNase) SUBJ:V-N (induced,DNase) COMP_of:N-N (region,promoter) COMP_around:V-N (induced,boxes) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) OBJ:V-N (induced,sites) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 271 +-------------------------COMP_around:V-N------------------------+ +---------------------------------------SUBJ:V-N---------------------------------------+-----------OBJ:V-N-----------+ | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--------COMP_by:N-N-------+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) COMP_of:N-N (region,promoter) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) SUBJ:V-N (induced,studies) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) COMP_by:N-N (positions,zinc) OBJ:V-N (induced,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 272 +-------------------------COMP_around:V-N------------------------+ +---------------------------------------SUBJ:V-N---------------------------------------+-----------OBJ:V-N-----------+ | +--------COMP_by:N-N-------+ +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--SUBJ:V_PASS-N--+ | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,promoter) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) SUBJ:V-N (induced,studies) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) COMP_by:N-N (positions,zinc) OBJ:V-N (induced,sites) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 273 +--------------------------------------COMP_at:V-N-------------------------------------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--COMP_by:N-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) OBJ:V-N (induced,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 274 +--------------------------------------COMP_at:V-N-------------------------------------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ +--------COMP_by:N-N-------+ +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) COMP_of:N-N (region,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) COMP_by:N-N (positions,zinc) OBJ:V-N (induced,sites) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 275 +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ +--------------------------------------COMP_at:V-N-------------------------------------+ | +-----------SUBJ:V-N----------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | +------OBJ:V-N------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (induced,positions) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) SUBJ:V-N (studies,protection) COMP_by:V-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 276 +------------------------------------------MOD:V-ADV-----------------------------------------+ +--------------------------------------COMP_at:V-N-------------------------------------+ | +-------------------------COMP_around:V-N------------------------+ | | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | +-----COMP_by:N-N----+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +--OBJ:V-N--+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (as,induced) SUBJ:V-N (induced,GENEXXX) MOD:V-ADV (induced,as) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) COMP_by:N-N (as,zinc) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) OBJ:V-N (induced,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) Parse 277 +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ +----------------------------------COMP_at:V-N---------------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) COMP_at:V-N (induced,same) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) COMP_by:V-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) COMP_as:N-N (positions,those) Parse 278 +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ +-----------------------------------------------COMP_as:V-N----------------------------------------------+ | +--------------------------------------COMP_at:V-N-------------------------------------+ | | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_as:V-N (induced,induced) SUBJ:V-N (induced,GENEXXX) COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) OBJ:V-N (induced,sites) COMP_by:V-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) Parse 279 +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ +------------------------------------------MOD:V-ADV-----------------------------------------+ | +--------------------------------------COMP_at:V-N-------------------------------------+ | | +-------------------------COMP_around:V-N------------------------+ | | | +-----------SUBJ:V-N----------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | | +------OBJ:V-N------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +--OBJ:V-N--+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) MOD:V-ADV (induced,as) COMP_of:N-N (region,promoter) COMP_around:V-N (induced,boxes) OBJ:V-N (as,induced) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_by:V-N (induced,zinc) COMP_at:V-N (induced,positions) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) MOD_ATT:N-N (sites,DNase) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) Parse 280 +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +--COMP_by:N-N--+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) SUBJ:V_PASS-N (induced,those) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) COMP_by:N-N (those,zinc) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) Parse 281 +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ +--------COMP_by:N-N-------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) COMP_by:N-N (positions,zinc) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) Parse 282 +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ +--------COMP_by:N-N-------+ +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) COMP_by:N-N (positions,zinc) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) Parse 283 +--------------------------------------COMP_at:V-N-------------------------------------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--COMP_by:N-N--+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) COMP_of:N-N (region,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) OBJ:V-N (induced,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 284 +--------------------------------------COMP_at:V-N-------------------------------------+ +-----------SUBJ:V-N----------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | +------OBJ:V-N------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) COMP_at:V-N (induced,positions) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (induced,sites) SUBJ:V-N (studies,protection) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 285 +--------------------------------------COMP_at:V-N-------------------------------------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ +--------COMP_by:N-N-------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) COMP_by:N-N (positions,zinc) OBJ:V-N (induced,sites) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 286 +-------------------------COMP_around:V-N------------------------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--COMP_by:N-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) OBJ:V-N (induced,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 287 +-------------------------COMP_around:V-N------------------------+ +-----------SUBJ:V-N----------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | +------OBJ:V-N------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) OBJ:V-N (studies,DNase) COMP_by:ADJ-N (induced,zinc) SUBJ:V-N (demonstrated,DNase) COMP_of:N-N (region,promoter) COMP_around:V-N (induced,boxes) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) OBJ:V-N (induced,sites) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 288 +-------------------------COMP_around:V-N------------------------+ +-----------SUBJ:V-N----------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | +------OBJ:V-N------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--MOD_POST:N-ADJ-+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_POST:N-ADJ (positions,induced) SUBJ:V-N (induced,GENEXXX) OBJ:V-N (studies,DNase) COMP_by:ADJ-N (induced,zinc) SUBJ:V-N (demonstrated,DNase) COMP_of:N-N (region,promoter) COMP_around:V-N (induced,boxes) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) OBJ:V-N (induced,sites) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 289 +-------------------------COMP_around:V-N------------------------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--------COMP_by:N-N-------+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) SUBJ:V_PASS-N (induced,those) COMP_of:N-N (region,promoter) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) COMP_by:N-N (positions,zinc) OBJ:V-N (induced,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 290 +-------------------------------------OBJ:V-N-------------------------------------+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:ADJ-N (induced,zinc) MOD_POST:N-ADJ (those,induced) COMP_as:N-N (positions,those) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) COMP_of:N-N (region,promoter) OBJ:V-N (protected,sites) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 291 +-------------------------------------OBJ:V-N-------------------------------------+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--COMP_by:N-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) COMP_as:N-N (positions,those) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) COMP_by:N-N (those,zinc) COMP_of:N-N (region,promoter) OBJ:V-N (protected,sites) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 292 +-------------------------------------OBJ:V-N-------------------------------------+ +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_as:N-N (positions,those) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) SUBJ:V_PASS-N (induced,positions) COMP_of:N-N (region,promoter) OBJ:V-N (protected,sites) COMP_by:V_PASS-N (induced,zinc) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 293 +---------------------------COMP_of:N-N---------------------------+ +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_by:V_PASS-N (induced,zinc) SUBJ:V_PASS-N (induced,those) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 294 +---------------------------COMP_of:N-N---------------------------+ +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:N-N (positions,zinc) SUBJ:V_PASS-N (induced,those) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 295 +---------------------------COMP_of:N-N---------------------------+ +--------COMP_by:N-N-------+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:N-N (positions,zinc) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 296 +---------------------------COMP_of:N-N---------------------------+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) SUBJ:V_PASS-N (induced,positions) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 297 +---------------------------COMP_of:N-N---------------------------+ | +----------------MOD_ATT:N-N---------------+ +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ +--MOD_POST:N-ADJ-+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:ADJ-N (induced,zinc) COMP_as:N-N (positions,those) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_POST:N-ADJ (positions,induced) COMP_of:N-N (region,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 298 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | +-----------SUBJ:V-N----------+ | | +----------------MOD_ATT:N-N---------------+ | +------OBJ:V-N------+ | +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | +--COMP_by:N-N--+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) COMP_as:N-N (positions,those) SUBJ:V-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 299 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +----------------MOD_ATT:N-N---------------+ | +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) COMP_as:N-N (positions,those) COMP_by:N-N (positions,zinc) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 300 +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | +-----------SUBJ:V-N----------+ | | +----------------MOD_ATT:N-N---------------+ | +------OBJ:V-N------+ | +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V_PASS-N (induced,those) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) COMP_as:N-N (positions,those) SUBJ:V-N (studies,protection) COMP_by:V_PASS-N (induced,zinc) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 301 +---------------------------COMP_of:N-N---------------------------+ | +----------------MOD_ATT:N-N---------------+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ +--COMP_by:N-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) COMP_as:N-N (positions,those) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) COMP_by:N-N (those,zinc) MOD_ATT:N-ADJ (region,large) COMP_of:N-N (region,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 302 +---------------------------COMP_of:N-N---------------------------+ | +----------------MOD_ATT:N-N---------------+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:N-N (positions,zinc) SUBJ:V_PASS-N (induced,those) COMP_as:N-N (positions,those) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_of:N-N (region,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 303 +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ +---------------------------COMP_of:N-N---------------------------+ | | +----------------MOD_ATT:N-N---------------+ | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_at:N-N (region,positions) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) COMP_of:N-N (region,sites) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 304 +---------------------------------------------------------------MOD_POST:N-ADJ---------------------------------------------------------------+ +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +----------------MOD_ATT:N-N---------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_POST:N-ADJ (region,induced) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:N-N (region,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) COMP_of:N-N (region,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 305 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | | +--COMP_by:N-N--+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) MOD:V-ADV (protected,as) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) OBJ:V-N (as,those) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 306 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | | +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_of:N-N (region,sites) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_by:V-N (protected,zinc) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 307 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | | +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_by:V-N (protected,zinc) COMP_at:V-N (protected,positions) COMP_as:N-N (positions,induced) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 308 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | | | +----------------MOD_ATT:N-N---------------+ | | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | | +-----COMP_by:N-N----+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +--OBJ:V-N--+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (as,induced) MOD:V-ADV (protected,as) COMP_of:N-N (region,sites) COMP_by:N-N (as,zinc) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 309 +----------------------------------------------MOD_POST:N-ADJ----------------------------------------------+ +---------------------------COMP_of:N-N---------------------------+ | | +----------------MOD_ATT:N-N---------------+ | +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_POST:N-ADJ (region,at) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_of:N-N (region,sites) COMP_as:N-N (positions,those) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 310 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ | +----------------------------------------------------------------SUBJ:V_PASS-N---------------------------------------------------------------+ | | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | | | +----------------MOD_ATT:N-N---------------+ | | | +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_of:N-N (region,sites) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_by:V-N (protected,zinc) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) SUBJ:V_PASS-N (induced,region) MOD_ATT:N-ADJ (DNase,induced) Parse 311 +-----------SUBJ:V-N----------+ +---------------------------COMP_of:N-N---------------------------+ +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) COMP_by:ADJ-N (induced,zinc) SUBJ:V-N (demonstrated,DNase) MOD_POST:N-ADJ (those,induced) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (region,large) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 312 +---------------------------COMP_of:N-N---------------------------+ | +--------------------MOD_ATT:N-N-------------------+ | | +----------------MOD_ATT:N-N---------------+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_as:N-N (positions,those) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) SUBJ:V_PASS-N (induced,positions) MOD_ATT:N-N (sites,GENEXXX) COMP_of:N-N (region,sites) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 313 +---------------------------COMP_of:N-N---------------------------+ | +--------------------MOD_ATT:N-N-------------------+ | | +----------------MOD_ATT:N-N---------------+ +--------COMP_by:N-N-------+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:N-N (positions,zinc) COMP_as:N-N (positions,those) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,GENEXXX) COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 314 +---------------------------COMP_of:N-N---------------------------+ | +--------------------MOD_ATT:N-N-------------------+ | | +----------------MOD_ATT:N-N---------------+ +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_as:N-N (positions,those) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) SUBJ:V_PASS-N (induced,positions) MOD_ATT:N-N (sites,GENEXXX) COMP_of:N-N (region,sites) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 315 +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ +-------------------------------------OBJ:V-N-------------------------------------+ | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +--------COMP_by:N-N-------+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_around:V-N (protected,boxes) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) COMP_by:N-N (positions,zinc) OBJ:V-N (protected,sites) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 316 +---------------------------COMP_of:N-N---------------------------+ | +--------------------MOD_ATT:N-N-------------------+ | | +----------------MOD_ATT:N-N---------------+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_as:N-N (positions,those) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,GENEXXX) COMP_of:N-N (region,sites) COMP_by:V_PASS-N (induced,zinc) SUBJ:V_PASS-N (induced,those) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 317 +---------------------------COMP_of:N-N---------------------------+ | +--------------------MOD_ATT:N-N-------------------+ +-----------SUBJ:V-N----------+ | | +----------------MOD_ATT:N-N---------------+ +--------COMP_by:N-N-------+ +------OBJ:V-N------+ | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) COMP_by:N-N (positions,zinc) SUBJ:V-N (demonstrated,DNase) COMP_as:N-N (positions,those) MOD_ATT:N-N (sites,promoter) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,GENEXXX) COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,positions) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 318 +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ +---------------------------COMP_of:N-N---------------------------+ | | +--------------------MOD_ATT:N-N-------------------+ | | | +----------------MOD_ATT:N-N---------------+ | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | +--COMP_by:N-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_at:N-N (region,positions) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) MOD_ATT:N-N (sites,GENEXXX) COMP_of:N-N (region,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 319 +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ +---------------------------COMP_of:N-N---------------------------+ | | +--------------------MOD_ATT:N-N-------------------+ | +-----------SUBJ:V-N----------+ | | +----------------MOD_ATT:N-N---------------+ | +------OBJ:V-N------+ | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V_PASS-N (induced,those) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-N (sites,promoter) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_at:N-N (region,positions) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) MOD_ATT:N-N (sites,GENEXXX) COMP_of:N-N (region,sites) SUBJ:V-N (studies,protection) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 320 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +--------COMP_by:N-N-------+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) COMP_by:N-N (positions,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_as:N-N (positions,induced) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 321 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +--------------------MOD_ATT:N-N-------------------+ | | +-----------SUBJ:V-N----------+ | | | +----------------MOD_ATT:N-N---------------+ | | +------OBJ:V-N------+ | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | +--------COMP_by:N-N-------+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:V-N (protected,positions) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_by:N-N (positions,zinc) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 322 +-------------------------------------------------------------COMP_as:N-N-------------------------------------------------------------+ +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +--------------------MOD_ATT:N-N-------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:N-N (region,positions) COMP_as:N-N (region,those) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,GENEXXX) COMP_of:N-N (region,sites) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 323 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +-----COMP_by:N-N----+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +--OBJ:V-N--+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (as,induced) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) COMP_by:N-N (as,zinc) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) MOD:V-ADV (protected,as) COMP_of:N-N (region,promoter) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 324 +---------------------------------------------------------------------COMP_by:N-N---------------------------------------------------------------------+ +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +--------------------MOD_ATT:N-N-------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_at:N-N (region,positions) MOD_ATT:N-N (studies,protection) COMP_by:N-N (region,zinc) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,GENEXXX) COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 325 +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +--------------------MOD_ATT:N-N-------------------+ | | +-----------SUBJ:V-N----------+ | | | +----------------MOD_ATT:N-N---------------+ | | +------OBJ:V-N------+ | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | +--COMP_by:N-N--+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (sites,promoter) COMP_at:N-N (region,positions) COMP_as:V-N (protected,those) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 326 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +--------------------MOD_ATT:N-N-------------------+ | | +-----------SUBJ:V-N----------+ | | | +----------------MOD_ATT:N-N---------------+ | | +------OBJ:V-N------+ | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | | +--COMP_by:N-N--+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) MOD:V-ADV (protected,as) OBJ:V-N (as,those) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (studies,protection) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 327 +---------------------------------------------------------------------COMP_as:V-N---------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +--------------------MOD_ATT:N-N-------------------+ | | +-----------SUBJ:V-N----------+ | | | +----------------MOD_ATT:N-N---------------+ | | +------OBJ:V-N------+ | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | +--COMP_by:N-N--+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (sites,promoter) COMP_as:V-N (protected,those) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (studies,protection) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 328 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ | +----------------------------------------------------COMP_at:N-N---------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +--------------------MOD_ATT:N-N-------------------+ | | | | | +----------------MOD_ATT:N-N---------------+ | | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_by:V-N (protected,zinc) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_at:N-N (region,same) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (DNase,induced) Parse 329 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +--------------------MOD_ATT:N-N-------------------+ | | | | | +----------------MOD_ATT:N-N---------------+ | | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | +-----COMP_by:N-N----+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +--OBJ:V-N--+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (as,induced) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) COMP_by:N-N (as,zinc) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) MOD:V-ADV (protected,as) MOD_ATT:N-N (sites,GENEXXX) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 330 +----------------------------------------------------------------SUBJ:V_PASS-N---------------------------------------------------------------+ +-------------------------------------------------------------COMP_as:N-N-------------------------------------------------------------+ | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +--------------------MOD_ATT:N-N-------------------+ | | | | | +----------------MOD_ATT:N-N---------------+ | | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | | +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:N-N (region,positions) COMP_as:N-N (region,those) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,GENEXXX) COMP_of:N-N (region,sites) COMP_by:V_PASS-N (induced,zinc) SUBJ:V_PASS-N (induced,region) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 331 +---------------------------COMP_of:N-N---------------------------+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--COMP_by:N-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-N (studies,protection) COMP_by:N-N (those,zinc) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 332 +-----------SUBJ:V-N----------+ +---------------------------COMP_of:N-N---------------------------+ +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (region,large) SUBJ:V_PASS-N (induced,positions) SUBJ:V-N (studies,protection) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 333 +---------------------------COMP_of:N-N---------------------------+ +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--COMP_by:N-N--+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) COMP_by:N-N (those,zinc) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 334 +-----------SUBJ:V-N----------+ +---------------------------COMP_of:N-N---------------------------+ +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--MOD_POST:N-ADJ-+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) COMP_by:ADJ-N (induced,zinc) SUBJ:V-N (demonstrated,DNase) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (region,large) MOD_POST:N-ADJ (positions,induced) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 335 +---------------------------COMP_of:N-N---------------------------+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 336 +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ +-----------SUBJ:V-N----------+ | +---------------------------COMP_of:N-N---------------------------+ | +--------COMP_by:N-N-------+ +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +--SUBJ:V_PASS-N--+ | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) COMP_by:N-N (positions,zinc) SUBJ:V_PASS-N (induced,positions) SUBJ:V-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 337 +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +-------------------------COMP_around:V-N------------------------+ +-----------SUBJ:V-N----------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | +------OBJ:V-N------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--------COMP_by:N-N-------+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) COMP_around:V-N (induced,boxes) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_of:N-N (region,promoter) COMP_by:N-N (positions,zinc) OBJ:V-N (induced,sites) SUBJ:V-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) Parse 338 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ +--------COMP_by:N-N-------+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) COMP_by:N-N (positions,zinc) SUBJ:V_PASS-N (induced,positions) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 339 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +--------------------------------------COMP_at:V-N-------------------------------------+ | +-------------------------COMP_around:V-N------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--------COMP_by:N-N-------+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) COMP_by:N-N (positions,zinc) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) COMP_as:N-N (positions,induced) MOD_ATT:N-N (sites,DNase) COMP_of:N-N (region,promoter) COMP_at:V-N (induced,positions) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) Parse 340 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +-----------SUBJ:V-N----------+ | +---------------------------COMP_of:N-N---------------------------+ | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--MOD_POST:N-ADJ-+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_POST:N-ADJ (positions,induced) COMP_of:N-N (region,sites) OBJ:V-N (studies,DNase) COMP_by:ADJ-N (induced,zinc) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) SUBJ:V-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 341 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | +------------------------------------------MOD:V-ADV-----------------------------------------+ | +--------------------------------------COMP_at:V-N-------------------------------------+ | | +-------------------------COMP_around:V-N------------------------+ | | +-----------SUBJ:V-N----------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | +------OBJ:V-N------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | +-----COMP_by:N-N----+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +--OBJ:V-N--+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (as,induced) SUBJ:V-N (induced,GENEXXX) MOD:V-ADV (protected,as) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) MOD:V-ADV (induced,as) COMP_at:V-N (induced,positions) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:N-N (as,zinc) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) COMP_around:V-N (induced,boxes) SUBJ:V-N (studies,protection) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) Parse 342 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | +-----COMP_by:N-N----+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +--OBJ:V-N--+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (as,induced) MOD:V-ADV (protected,as) COMP_of:N-N (region,sites) COMP_by:N-N (as,zinc) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 343 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +-----------SUBJ:V-N----------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | +-----COMP_by:N-N----+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +--OBJ:V-N--+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (as,induced) MOD:V-ADV (protected,as) COMP_of:N-N (region,sites) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) COMP_by:N-N (as,zinc) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) SUBJ:V-N (studies,protection) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 344 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) COMP_of:N-N (region,promoter) COMP_by:V-N (protected,zinc) COMP_as:N-N (positions,induced) OBJ:V-N (protected,region) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 345 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +-------------------------------------------------------------------------COMP_as:V-N------------------------------------------------------------------------+ | +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | | +-----------SUBJ:V-N----------+ | +---------------------------COMP_of:N-N---------------------------+ | | | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-ADJ (region,large) COMP_by:V-N (protected,zinc) MOD_ATT:N-N (sites,DNase) COMP_as:V-N (protected,induced) SUBJ:V-N (studies,protection) MOD_ATT:N-ADJ (DNase,induced) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) COMP_around:V-N (protected,boxes) Parse 346 +------------------------------------------------------------COMP_at:V-N-----------------------------------------------------------+ | +----------------------------------COMP_at:V-N---------------------------------+ +-----------SUBJ:V-N----------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | +------OBJ:V-N------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) COMP_at:V-N (protected,same) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (induced,same) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_of:N-N (region,promoter) OBJ:V-N (induced,sites) SUBJ:V-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_as:N-N (positions,those) Parse 347 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +------------------------------------------MOD:V-ADV-----------------------------------------+ | +--------------------------------------COMP_at:V-N-------------------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +-----COMP_by:N-N----+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +--OBJ:V-N--+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (as,induced) SUBJ:V-N (induced,GENEXXX) COMP_by:N-N (as,zinc) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD:V-ADV (protected,as) OBJ:V-N (induced,sites) MOD_ATT:N-N (sites,DNase) COMP_of:N-N (region,promoter) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD:V-ADV (induced,as) MOD_ATT:N-ADJ (boxes,0A) Parse 348 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +-----------SUBJ:V-N----------+ +-------------------------------------OBJ:V-N-------------------------------------+ | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +--COMP_by:N-N--+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) COMP_at:V-N (protected,positions) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) OBJ:V-N (protected,sites) SUBJ:V-N (studies,protection) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 349 +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ +---------------------------COMP_of:N-N---------------------------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:ADJ-N (induced,zinc) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 350 +------------------------------------------------------------COMP_at:V-N-----------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) COMP_at:V-N (protected,same) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) COMP_of:N-N (region,promoter) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 351 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +-----------SUBJ:V-N----------+ | +---------------------------COMP_of:N-N---------------------------+ | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) COMP_by:N-N (positions,zinc) SUBJ:V-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 352 +-------------------------------------------------------------COMP_as:N-N-------------------------------------------------------------+ +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | +-----------SUBJ:V-N----------+ +---------------------------COMP_of:N-N---------------------------+ | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V_PASS-N (induced,those) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_at:N-N (region,positions) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) COMP_as:N-N (region,those) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) SUBJ:V-N (studies,protection) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 353 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | +-----------SUBJ:V-N----------+ | +---------------------------COMP_of:N-N---------------------------+ | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +OBJ:+MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) OBJ:V-N (studies,DNase) COMP_by:ADJ-N (induced,zinc) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) COMP_at:N-N (region,positions) MOD:V-ADV (protected,as) SUBJ:V-N (protected,GENEXXX) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (sites,hypersensitive) OBJ:V-N (as,those) COMP_of:N-N (region,promoter) SUBJ:V-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 354 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_of:N-N (region,promoter) COMP_by:V-N (protected,zinc) SUBJ:V_PASS-N (induced,positions) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 355 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ | +----------------------------------------------MOD_POST:N-ADJ----------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_POST:N-ADJ (region,at) COMP_of:N-N (region,promoter) COMP_by:V-N (protected,zinc) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (DNase,induced) Parse 356 +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ +---------------------------COMP_of:N-N---------------------------+ | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +--COMP_by:N-N--+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) COMP_of:N-N (region,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 357 +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ +---------------------------COMP_of:N-N---------------------------+ | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) SUBJ:V_PASS-N (induced,positions) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 358 +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ +-----------SUBJ:V-N----------+ +---------------------------COMP_of:N-N---------------------------+ | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) COMP_of:N-N (region,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_at:N-N (region,positions) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) SUBJ:V_PASS-N (induced,positions) SUBJ:V-N (studies,protection) COMP_by:V_PASS-N (induced,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 359 +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ +-----------SUBJ:V-N----------+ +---------------------------COMP_of:N-N---------------------------+ | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--MOD_POST:N-ADJ-+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_POST:N-ADJ (positions,induced) OBJ:V-N (studies,DNase) COMP_by:ADJ-N (induced,zinc) SUBJ:V-N (demonstrated,DNase) COMP_of:N-N (region,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_at:N-N (region,positions) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 360 +-------------------------------------------------SUBJ:V-N-------------------------------------------------+--------------------------------------COMP_at:V-N-------------------------------------+ +-----------SUBJ:V-N----------+ +-----------OBJ:V-N-----------+ +--------COMP_by:N-N-------+ +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) SUBJ:V-N (induced,DNase) COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) COMP_at:V-N (induced,positions) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) COMP_by:N-N (positions,zinc) OBJ:V-N (induced,sites) SUBJ:V_PASS-N (induced,positions) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 361 +-------------------------------------------------------------COMP_as:N-N-------------------------------------------------------------+ +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +MOD_PO+COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:ADJ-N (induced,zinc) MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) COMP_as:N-N (region,those) MOD_ATT:N-N (studies,protection) MOD_POST:N-ADJ (those,induced) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 362 +----------------------------------------------------------------SUBJ:V_PASS-N---------------------------------------------------------------+ +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) COMP_by:V_PASS-N (induced,zinc) SUBJ:V_PASS-N (induced,region) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 363 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | +--COMP_by:N-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) MOD:V-ADV (protected,as) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (sites,hypersensitive) OBJ:V-N (as,those) COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 364 +---------------------------------------------------------------------COMP_by:N-N---------------------------------------------------------------------+ +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_of:N-N (region,sites) MOD_ATT:N-N (studies,protection) COMP_by:N-N (region,zinc) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 365 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | +-----------SUBJ:V-N----------+ | +---------------------------COMP_of:N-N---------------------------+ | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | +--COMP_by:N-N--+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) COMP_at:N-N (region,positions) MOD:V-ADV (protected,as) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) OBJ:V-N (as,those) COMP_of:N-N (region,promoter) SUBJ:V-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 366 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_by:V-N (protected,zinc) COMP_of:N-N (region,promoter) COMP_at:V-N (protected,positions) COMP_as:N-N (positions,induced) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 367 +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ +--------------------------------------COMP_at:V-N-------------------------------------+ | +---------------------------------------SUBJ:V-N---------------------------------------+-----------OBJ:V-N-----------+ | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (induced,positions) SUBJ:V-N (induced,studies) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) COMP_by:V-N (induced,zinc) COMP_as:N-N (positions,induced) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 368 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | +-----------SUBJ:V-N----------+ | +---------------------------COMP_of:N-N---------------------------+ | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) COMP_at:N-N (region,positions) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_of:N-N (region,promoter) COMP_by:V-N (protected,zinc) SUBJ:V_PASS-N (induced,positions) SUBJ:V-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 369 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +------------------------------------------------------------COMP_at:V-N-----------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) COMP_at:V-N (protected,same) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_by:V-N (protected,zinc) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (DNase,induced) Parse 370 +---------------------------------------------------COMP_by:V-N---------------------------------------------------+ +--------------------------------------COMP_at:V-N-------------------------------------+ | +-------------------------------------------------SUBJ:V-N-------------------------------------------------+-------------------------COMP_around:V-N------------------------+ | | +-----------SUBJ:V-N----------+ +-----------OBJ:V-N-----------+ | | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) SUBJ:V-N (induced,DNase) COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_around:V-N (induced,boxes) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (induced,positions) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) OBJ:V-N (induced,sites) SUBJ:V-N (studies,protection) COMP_by:V-N (induced,zinc) COMP_as:N-N (positions,induced) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) Parse 371 +---------------------------------------------------------------MOD_POST:N-ADJ---------------------------------------------------------------+ +-------------------------------------------------------------COMP_as:N-N-------------------------------------------------------------+ | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | | +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:ADJ-N (induced,zinc) COMP_of:N-N (region,promoter) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) MOD_POST:N-ADJ (region,induced) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) COMP_as:N-N (region,those) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 372 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ | | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +--OBJ:V-N--+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) OBJ:V-N (as,induced) MOD:V-ADV (protected,as) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) COMP_by:V-N (protected,zinc) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 373 +-------------------------------------------------SUBJ:V-N-------------------------------------------------+ +-----------SUBJ:V-N----------+ +-----------OBJ:V-N-----------+ +--------COMP_by:N-N-------+ +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) COMP_by:N-N (positions,zinc) SUBJ:V-N (demonstrated,DNase) COMP_as:N-N (positions,those) SUBJ:V-N (induced,DNase) COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) SUBJ:V_PASS-N (induced,positions) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) Parse 374 +---------------------------------------SUBJ:V-N---------------------------------------+-----------OBJ:V-N-----------+ +--------COMP_by:N-N-------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:N-N (positions,zinc) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) SUBJ:V-N (induced,studies) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) Parse 375 +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +--COMP_by:N-N--+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) SUBJ:V_PASS-N (induced,those) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) COMP_by:N-N (those,zinc) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) Parse 376 +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) COMP_by:N-N (positions,zinc) SUBJ:V_PASS-N (induced,those) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) Parse 377 +--------------------------------------COMP_at:V-N-------------------------------------+ +-------------------------COMP_around:V-N------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--------COMP_by:N-N-------+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) COMP_by:N-N (positions,zinc) MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) COMP_as:N-N (positions,induced) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 378 +-------------------------------------OBJ:V-N-------------------------------------+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_as:N-N (positions,those) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) COMP_of:N-N (region,promoter) OBJ:V-N (protected,sites) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 379 +---------------------------COMP_of:N-N---------------------------+ | +----------------MOD_ATT:N-N---------------+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_as:N-N (positions,those) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_of:N-N (region,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 380 +---------------------------COMP_of:N-N---------------------------+ | +----------------MOD_ATT:N-N---------------+ +--------COMP_by:N-N-------+ +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:N-N (positions,zinc) COMP_as:N-N (positions,those) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 381 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | +-----------SUBJ:V-N----------+ | | +----------------MOD_ATT:N-N---------------+ | +------OBJ:V-N------+ | +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) COMP_as:N-N (positions,those) COMP_by:N-N (positions,zinc) SUBJ:V-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 382 +---------------------------COMP_of:N-N---------------------------+ | +----------------MOD_ATT:N-N---------------+ +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_as:N-N (positions,those) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_of:N-N (region,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 383 +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ +---------------------------COMP_of:N-N---------------------------+ | | +----------------MOD_ATT:N-N---------------+ +--------COMP_by:N-N-------+ +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_at:N-N (region,positions) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) COMP_by:N-N (positions,zinc) COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 384 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | +-----------SUBJ:V-N----------+ | | +----------------MOD_ATT:N-N---------------+ +--------COMP_by:N-N-------+ +------OBJ:V-N------+ | +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) COMP_as:N-N (positions,those) COMP_by:N-N (positions,zinc) SUBJ:V_PASS-N (induced,positions) SUBJ:V-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 385 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +----------------MOD_ATT:N-N---------------+ | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:N-N (positions,zinc) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) COMP_as:N-N (positions,induced) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 386 +----------------------------------------------------------------SUBJ:V_PASS-N---------------------------------------------------------------+ +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | +-----------SUBJ:V-N----------+ | +----------------MOD_ATT:N-N---------------+ | | +------OBJ:V-N------+ | +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_at:N-N (region,positions) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) COMP_of:N-N (region,sites) SUBJ:V-N (studies,protection) COMP_by:V_PASS-N (induced,zinc) SUBJ:V_PASS-N (induced,region) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 387 +--------------------------------------------------------------------MOD:V-ADV-------------------------------------------------------------------+ | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +-----------SUBJ:V-N----------+ | | +----------------MOD_ATT:N-N---------------+ | | +------OBJ:V-N------+ | +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | +-----COMP_by:N-N----+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +OBJ:+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) COMP_at:N-N (region,positions) MOD:V-ADV (protected,as) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (sites,hypersensitive) OBJ:V-N (as,those) SUBJ:V-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) COMP_by:N-N (as,zinc) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 388 +---------------------------------------------------------------------COMP_by:N-N---------------------------------------------------------------------+ +----------------------------------------------------------------SUBJ:V_PASS-N---------------------------------------------------------------+ | +-------------------------------------------------------------COMP_as:N-N-------------------------------------------------------------+ | | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | | | +----------------MOD_ATT:N-N---------------+ | | | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | | | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:N-N (region,positions) COMP_as:N-N (region,those) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) COMP_by:N-N (region,zinc) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) COMP_of:N-N (region,sites) OBJ:V-N (protected,region) SUBJ:V_PASS-N (induced,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 389 +-----------SUBJ:V-N----------+ +---------------------------COMP_of:N-N---------------------------+ +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--COMP_by:N-N--+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) SUBJ:V_PASS-N (induced,those) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) COMP_by:N-N (those,zinc) MOD_ATT:N-ADJ (region,large) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 390 +---------------------------COMP_of:N-N---------------------------+ | +--------------------MOD_ATT:N-N-------------------+ +-----------SUBJ:V-N----------+ | | +----------------MOD_ATT:N-N---------------+ +------OBJ:V-N------+ | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ +--MOD_POST:N-ADJ-+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ +COMP_by:+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) COMP_by:ADJ-N (induced,zinc) SUBJ:V-N (demonstrated,DNase) COMP_as:N-N (positions,those) MOD_ATT:N-N (sites,promoter) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (region,large) MOD_POST:N-ADJ (positions,induced) MOD_ATT:N-N (sites,GENEXXX) COMP_of:N-N (region,sites) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 391 +---------------------------COMP_of:N-N---------------------------+ | +--------------------MOD_ATT:N-N-------------------+ +-----------SUBJ:V-N----------+ | | +----------------MOD_ATT:N-N---------------+ +------OBJ:V-N------+ | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) COMP_by:N-N (positions,zinc) SUBJ:V-N (demonstrated,DNase) SUBJ:V_PASS-N (induced,those) COMP_as:N-N (positions,those) MOD_ATT:N-N (sites,promoter) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,GENEXXX) COMP_of:N-N (region,sites) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 392 +------------------------------------------------------------COMP_at:V-N-----------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +-------------------------------------OBJ:V-N-------------------------------------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +------------COMP_by:N-N-----------+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) COMP_at:V-N (protected,same) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,sites) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) COMP_by:N-N (same,zinc) MOD_ATT:N-N (sites,DNase) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (DNase,induced) Parse 393 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +--------------------MOD_ATT:N-N-------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:N-N (positions,zinc) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) COMP_as:N-N (positions,induced) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 394 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +--------------------MOD_ATT:N-N-------------------+ | | | | | +----------------MOD_ATT:N-N---------------+ | | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | +--------COMP_by:N-N-------+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) COMP_by:N-N (positions,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-N (sites,GENEXXX) COMP_as:N-N (positions,induced) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 395 +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ +---------------------------COMP_of:N-N---------------------------+ | | +--------------------MOD_ATT:N-N-------------------+ | | | +----------------MOD_ATT:N-N---------------+ +--------COMP_by:N-N-------+ +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_at:N-N (region,positions) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) COMP_by:N-N (positions,zinc) MOD_ATT:N-N (sites,GENEXXX) COMP_of:N-N (region,sites) SUBJ:V_PASS-N (induced,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 396 +-------------------------------------------------------------COMP_as:N-N-------------------------------------------------------------+ +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +--------------------MOD_ATT:N-N-------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | +--COMP_by:N-N--+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) COMP_by:N-N (those,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:N-N (region,positions) COMP_as:N-N (region,those) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,GENEXXX) COMP_of:N-N (region,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 397 +------------------------------------------------------------COMP_at:V-N-----------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +--------------------MOD_ATT:N-N-------------------+ | | | | | +----------------MOD_ATT:N-N---------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | +------------COMP_by:N-N-----------+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-N (sites,GENEXXX) COMP_at:V-N (protected,same) OBJ:V-N (protected,region) COMP_by:N-N (same,zinc) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (DNase,induced) Parse 398 +---------------------------------------------------------------------COMP_by:N-N---------------------------------------------------------------------+ +----------------------------------------------------COMP_at:N-N---------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +--------------------MOD_ATT:N-N-------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) COMP_by:N-N (region,zinc) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,GENEXXX) COMP_of:N-N (region,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_at:N-N (region,same) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (DNase,induced) Parse 399 +----------------------------------------------------COMP_at:N-N---------------------------------------------------+ +---------------------------COMP_of:N-N---------------------------+ | | +--------------------MOD_ATT:N-N-------------------+ | | | +----------------MOD_ATT:N-N---------------+ | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,GENEXXX) COMP_of:N-N (region,sites) COMP_as:N-N (positions,those) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_at:N-N (region,same) MOD_ATT:N-ADJ (DNase,induced) Parse 400 +---------------------------------------------------------------------COMP_by:N-N---------------------------------------------------------------------+ +-------------------------------------------------------------COMP_as:N-N-------------------------------------------------------------+ | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +--------------------MOD_ATT:N-N-------------------+ | | | | | +----------------MOD_ATT:N-N---------------+ | | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:N-N (region,positions) COMP_as:N-N (region,those) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) COMP_by:N-N (region,zinc) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-N (sites,GENEXXX) COMP_of:N-N (region,sites) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 401 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ | +-------------------------------------------------------------COMP_as:N-N-------------------------------------------------------------+ | | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | | | +--------------------MOD_ATT:N-N-------------------+ | | | +-----------SUBJ:V-N----------+ | | | +----------------MOD_ATT:N-N---------------+ | | | +------OBJ:V-N------+ | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-N (sites,promoter) COMP_at:N-N (region,positions) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) COMP_as:N-N (region,those) MOD_ATT:N-N (sites,DNase) COMP_by:V-N (protected,zinc) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 402 +---------------------------COMP_of:N-N---------------------------+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_as:N-N (positions,induced) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_by:N-N (positions,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 403 +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +-------------------------COMP_around:V-N------------------------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--------COMP_by:N-N-------+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) COMP_by:N-N (positions,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_of:N-N (region,promoter) OBJ:V-N (induced,sites) COMP_as:N-N (positions,induced) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) Parse 404 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) COMP_by:N-N (positions,zinc) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) COMP_as:N-N (positions,induced) COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 405 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +-----------SUBJ:V-N----------+ | +---------------------------COMP_of:N-N---------------------------+ +--------COMP_by:N-N-------+ +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) COMP_by:N-N (positions,zinc) SUBJ:V_PASS-N (induced,positions) SUBJ:V-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 406 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +--------COMP_by:N-N-------+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) COMP_by:N-N (positions,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_as:N-N (positions,induced) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 407 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) COMP_by:N-N (positions,zinc) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) COMP_as:N-N (positions,induced) COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 408 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_by:V-N (protected,zinc) COMP_of:N-N (region,promoter) COMP_at:V-N (protected,positions) COMP_as:N-N (positions,induced) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 409 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +--------------------------------------COMP_at:V-N-------------------------------------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) COMP_by:N-N (positions,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_of:N-N (region,promoter) OBJ:V-N (induced,sites) COMP_as:N-N (positions,induced) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) Parse 410 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ | +-----------------------------------------------------------------COMP_as:N-N----------------------------------------------------------------+ | | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-N (promoter,GENEXXX) COMP_as:N-N (region,induced) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-N (sites,DNase) COMP_of:N-N (region,promoter) COMP_by:V-N (protected,zinc) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 411 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ | +----------------------------------------------------COMP_at:N-N---------------------------------------------------+ | +-----------SUBJ:V-N----------+ | +---------------------------COMP_of:N-N---------------------------+ | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_of:N-N (region,promoter) COMP_by:V-N (protected,zinc) SUBJ:V-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_at:N-N (region,same) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (DNase,induced) Parse 412 +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ +---------------------------COMP_of:N-N---------------------------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) COMP_by:N-N (positions,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 413 +---------------------------------------------------------------------COMP_by:N-N---------------------------------------------------------------------+ +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | +-----------SUBJ:V-N----------+ +---------------------------COMP_of:N-N---------------------------+ | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) SUBJ:V_PASS-N (induced,those) MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_at:N-N (region,positions) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_of:N-N (region,sites) COMP_by:N-N (region,zinc) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 414 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +-----------SUBJ:V-N----------+ | +---------------------------COMP_of:N-N---------------------------+ | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_by:V-N (protected,zinc) SUBJ:V-N (studies,protection) COMP_of:N-N (region,promoter) COMP_at:V-N (protected,positions) COMP_as:N-N (positions,induced) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 415 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +------------------------------------------------------------COMP_at:V-N-----------------------------------------------------------+ | +-----------SUBJ:V-N----------+ | +---------------------------COMP_of:N-N---------------------------+ | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) COMP_at:V-N (protected,same) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_by:V-N (protected,zinc) SUBJ:V-N (studies,protection) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (DNase,induced) Parse 416 +---------------------------------------------------------------------COMP_by:N-N---------------------------------------------------------------------+ +-------------------------------------------------------------COMP_as:N-N-------------------------------------------------------------+ | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V_PASS-N (induced,those) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) COMP_as:N-N (region,those) MOD_ATT:N-N (studies,protection) COMP_by:N-N (region,zinc) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 417 +---------------------------------------------------------------------COMP_by:N-N---------------------------------------------------------------------+ +----------------------------------------------------------------SUBJ:V_PASS-N---------------------------------------------------------------+ | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_of:N-N (region,sites) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) COMP_by:N-N (region,zinc) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) SUBJ:V_PASS-N (induced,region) MOD_ATT:N-ADJ (DNase,induced) Parse 418 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ | +----------------------------------------------------------------SUBJ:V_PASS-N---------------------------------------------------------------+ | | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | +-----------SUBJ:V-N----------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) COMP_at:N-N (region,positions) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_of:N-N (region,promoter) COMP_by:V-N (protected,zinc) SUBJ:V-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) SUBJ:V_PASS-N (induced,region) MOD_ATT:N-ADJ (DNase,induced) Parse 419 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +-------------------------------------------------------------------------COMP_as:V-N------------------------------------------------------------------------+ | | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) COMP_by:V-N (protected,zinc) COMP_of:N-N (region,promoter) COMP_as:V-N (protected,induced) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 420 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +-------------------------------------------------------------------------COMP_as:V-N------------------------------------------------------------------------+ | | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) COMP_by:V-N (protected,zinc) COMP_of:N-N (region,promoter) COMP_as:V-N (protected,induced) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 421 +---------------------------------------------------------------------COMP_by:N-N---------------------------------------------------------------------+ +----------------------------------------------------------------SUBJ:V_PASS-N---------------------------------------------------------------+ | +-------------------------------------------------------------COMP_as:N-N-------------------------------------------------------------+ | | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | | | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) COMP_as:N-N (region,those) MOD_ATT:N-N (studies,protection) COMP_by:N-N (region,zinc) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) OBJ:V-N (protected,region) SUBJ:V_PASS-N (induced,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 422 +-------------------------------------------------SUBJ:V-N-------------------------------------------------+ +-----------SUBJ:V-N----------+ +-----------OBJ:V-N-----------+ +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +--COMP_by:N-N--+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) SUBJ:V_PASS-N (induced,those) COMP_as:N-N (positions,those) SUBJ:V-N (induced,DNase) COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_by:N-N (those,zinc) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) Parse 423 +-------------------------------------------------SUBJ:V-N-------------------------------------------------+ +-----------SUBJ:V-N----------+ +-----------OBJ:V-N-----------+ +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) COMP_by:N-N (positions,zinc) SUBJ:V-N (demonstrated,DNase) SUBJ:V_PASS-N (induced,those) COMP_as:N-N (positions,those) SUBJ:V-N (induced,DNase) COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) Parse 424 +--------------------------------------COMP_at:V-N-------------------------------------+ +-------------------------------------------------SUBJ:V-N-------------------------------------------------+-------------------------COMP_around:V-N------------------------+ | +-----------SUBJ:V-N----------+ +-----------OBJ:V-N-----------+ | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--------COMP_by:N-N-------+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) SUBJ:V-N (induced,DNase) COMP_by:N-N (positions,zinc) MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) COMP_around:V-N (induced,boxes) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (induced,positions) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) COMP_as:N-N (positions,induced) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 425 +--------------------------------------COMP_at:V-N-------------------------------------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) COMP_by:N-N (positions,zinc) COMP_of:N-N (region,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,induced) OBJ:V-N (induced,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 426 +-----------SUBJ:V-N----------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ +------OBJ:V-N------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +--COMP_by:N-N--+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) SUBJ:V_PASS-N (induced,those) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_by:N-N (those,zinc) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) Parse 427 +--------------------------------------COMP_at:V-N-------------------------------------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) COMP_by:N-N (positions,zinc) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) COMP_at:V-N (induced,positions) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,induced) OBJ:V-N (induced,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) Parse 428 +-----------SUBJ:V-N----------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ +--------COMP_by:N-N-------+ +------OBJ:V-N------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) OBJ:V-N (studies,DNase) COMP_by:N-N (positions,zinc) SUBJ:V-N (demonstrated,DNase) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) SUBJ:V_PASS-N (induced,positions) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) Parse 429 +----------------------------------COMP_at:V-N---------------------------------+ +-------------------------COMP_around:V-N------------------------+ | +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +------------COMP_by:N-N-----------+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) COMP_at:V-N (induced,same) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) COMP_by:N-N (same,zinc) MOD_ATT:N-N (sites,DNase) COMP_as:N-N (positions,those) Parse 430 +-------------------------------------OBJ:V-N-------------------------------------+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_as:N-N (positions,induced) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) COMP_of:N-N (region,promoter) OBJ:V-N (protected,sites) COMP_by:N-N (positions,zinc) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 431 +-----------SUBJ:V-N----------+ +---------------------------COMP_of:N-N---------------------------+ +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+SUBJ:V+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) COMP_by:N-N (positions,zinc) SUBJ:V-N (demonstrated,DNase) SUBJ:V_PASS-N (induced,those) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (region,large) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 432 +---------------------------COMP_of:N-N---------------------------+ | +----------------MOD_ATT:N-N---------------+ +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_as:N-N (positions,induced) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_of:N-N (region,sites) COMP_by:N-N (positions,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 433 +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +----------------MOD_ATT:N-N---------------+ | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | +--------COMP_by:N-N-------+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:N-N (positions,zinc) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) COMP_as:N-N (positions,induced) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 434 +---------------------------COMP_of:N-N---------------------------+ | +----------------MOD_ATT:N-N---------------+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_as:N-N (positions,induced) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_of:N-N (region,sites) COMP_by:N-N (positions,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 435 +---------------------------COMP_of:N-N---------------------------+ | +----------------MOD_ATT:N-N---------------+ +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ +------------COMP_by:N-N-----------+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_by:N-N (same,zinc) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_of:N-N (region,sites) COMP_as:N-N (positions,those) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 436 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ +-------------------------------------------------------------------------COMP_as:V-N------------------------------------------------------------------------+ | | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | | +---------------------------COMP_of:N-N---------------------------+ | | | +-----------SUBJ:V-N----------+ | | +----------------MOD_ATT:N-N---------------+ | | | +------OBJ:V-N------+ | +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-N (sites,promoter) COMP_at:N-N (region,positions) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) COMP_by:V-N (protected,zinc) SUBJ:V-N (studies,protection) COMP_as:V-N (protected,induced) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 437 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +--------------------MOD_ATT:N-N-------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:N-N (positions,zinc) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) COMP_as:N-N (positions,induced) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 438 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +-----------SUBJ:V-N----------+ | +---------------------------COMP_of:N-N---------------------------+ | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) COMP_by:N-N (positions,zinc) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) COMP_as:N-N (positions,induced) COMP_of:N-N (region,promoter) SUBJ:V-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_at:V-N (protected,positions) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 439 +---------------------------------------------------------------------COMP_by:N-N---------------------------------------------------------------------+ +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +--------------------MOD_ATT:N-N-------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:N-N (region,positions) MOD_ATT:N-N (studies,protection) COMP_by:N-N (region,zinc) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,GENEXXX) COMP_of:N-N (region,sites) COMP_as:N-N (positions,induced) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 440 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +--------------------MOD_ATT:N-N-------------------+ | | | | | +----------------MOD_ATT:N-N---------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (sites,promoter) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_by:V-N (protected,zinc) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,induced) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 441 +---------------------------COMP_of:N-N---------------------------+ +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_as:N-N (positions,induced) COMP_of:N-N (region,promoter) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_by:N-N (positions,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 442 +-----------SUBJ:V-N----------+ +---------------------------COMP_of:N-N---------------------------+ +--------COMP_by:N-N-------+ +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) COMP_by:N-N (positions,zinc) SUBJ:V-N (demonstrated,DNase) COMP_as:N-N (positions,those) COMP_of:N-N (region,promoter) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (region,large) SUBJ:V_PASS-N (induced,positions) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 443 +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +--------COMP_by:N-N-------+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) COMP_by:N-N (positions,zinc) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) COMP_as:N-N (positions,induced) COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 444 +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +-------------------------COMP_around:V-N------------------------+ +-----------SUBJ:V-N----------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | +------OBJ:V-N------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +--------COMP_by:N-N-------+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) COMP_by:N-N (positions,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) COMP_around:V-N (induced,boxes) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_of:N-N (region,promoter) OBJ:V-N (induced,sites) COMP_as:N-N (positions,induced) SUBJ:V-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) Parse 445 +------------------------------------------------------------COMP_at:V-N-----------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +------------COMP_by:N-N-----------+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) COMP_at:V-N (protected,same) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) COMP_of:N-N (region,promoter) COMP_by:N-N (same,zinc) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (DNase,induced) Parse 446 +----------------------------------------------------------------COMP_at:V-N---------------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +-----------SUBJ:V-N----------+ | +---------------------------COMP_of:N-N---------------------------+ | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +--------COMP_by:N-N-------+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) COMP_by:N-N (positions,zinc) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (protected,GENEXXX) COMP_at:V-N (protected,positions) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_as:N-N (positions,induced) SUBJ:V-N (studies,protection) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) MOD_ATT:N-ADJ (DNase,induced) Parse 447 +---------------------------------------------------------------------COMP_by:N-N---------------------------------------------------------------------+ +----------------------------------------------------COMP_at:N-N---------------------------------------------------+ | +-----------SUBJ:V-N----------+ +---------------------------COMP_of:N-N---------------------------+ | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) COMP_by:N-N (region,zinc) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_at:N-N (region,same) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (DNase,induced) Parse 448 +------------------------------------------------------------COMP_at:V-N-----------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +------------COMP_by:N-N-----------+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) COMP_at:V-N (protected,same) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) COMP_of:N-N (region,promoter) COMP_by:N-N (same,zinc) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (DNase,induced) Parse 449 +---------------------------------------------------------------------COMP_by:N-N---------------------------------------------------------------------+ +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | +-----------SUBJ:V-N----------+ +---------------------------COMP_of:N-N---------------------------+ | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--SUBJ:V_PASS-N--+ | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_at:N-N (region,positions) SUBJ:V-N (protected,GENEXXX) COMP_as:N-N (positions,those) COMP_of:N-N (region,sites) COMP_by:N-N (region,zinc) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) SUBJ:V_PASS-N (induced,positions) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 450 +-----------------------------------------------------------------------------COMP_by:V-N-----------------------------------------------------------------------------+ | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_of:N-N (region,promoter) COMP_by:V-N (protected,zinc) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,induced) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 451 +---------------------------------------------------------------------COMP_by:N-N---------------------------------------------------------------------+ +-----------------------------------------------------------------COMP_as:N-N----------------------------------------------------------------+ | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) COMP_as:N-N (region,induced) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-N (studies,protection) COMP_by:N-N (region,zinc) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 452 +-------------------------COMP_around:V-N------------------------+ +---------------------------------------SUBJ:V-N---------------------------------------+-----------OBJ:V-N-----------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +------------COMP_by:N-N-----------+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) SUBJ:V-N (induced,studies) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) COMP_by:N-N (same,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) COMP_as:N-N (positions,those) Parse 453 +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) COMP_as:N-N (positions,induced) COMP_of:N-N (region,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) COMP_by:N-N (positions,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) Parse 454 +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ +----MOD_ATT:N-N----+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +------------COMP_by:N-N-----------+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) COMP_of:N-N (region,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_by:N-N (same,zinc) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) COMP_as:N-N (positions,those) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) Parse 455 +-------------------------COMP_around:V-N------------------------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ | +------------COMP_by:N-N-----------+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) COMP_around:V-N (induced,boxes) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) COMP_by:N-N (same,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) COMP_as:N-N (positions,those) Parse 456 +---------------------------COMP_of:N-N---------------------------+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +------------COMP_by:N-N-----------+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_by:N-N (same,zinc) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 457 +---------------------------COMP_of:N-N---------------------------+ | +----------------MOD_ATT:N-N---------------+ +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ +------------COMP_by:N-N-----------+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_by:N-N (same,zinc) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_of:N-N (region,sites) COMP_as:N-N (positions,those) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 458 +------------------------------------------------------------COMP_at:V-N-----------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +--------------------MOD_ATT:N-N-------------------+ | | | | +----------------MOD_ATT:N-N---------------+ | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ +------------COMP_by:N-N-----------+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_at:V-N (protected,same) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (sites,GENEXXX) COMP_by:N-N (same,zinc) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (DNase,induced) Parse 459 +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ +---------------------------COMP_of:N-N---------------------------+ | | +--------------------MOD_ATT:N-N-------------------+ | | | +----------------MOD_ATT:N-N---------------+ | +----MOD_ATT:N-N----+ +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:N-N (positions,zinc) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_at:N-N (region,positions) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,induced) MOD_ATT:N-N (sites,GENEXXX) COMP_of:N-N (region,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 460 +---------------------------------------------------------------------COMP_by:N-N---------------------------------------------------------------------+ +-----------------------------------------------------------------COMP_as:N-N----------------------------------------------------------------+ | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | +---------------------------COMP_of:N-N---------------------------+ | | | | +--------------------MOD_ATT:N-N-------------------+ | | | | | +----------------MOD_ATT:N-N---------------+ | | | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ | | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_ATT:N-N (protection,DNase) COMP_as:N-N (region,induced) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) COMP_at:N-N (region,positions) MOD_ATT:N-N (studies,protection) COMP_by:N-N (region,zinc) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-N (sites,GENEXXX) COMP_of:N-N (region,sites) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 461 +------------------------------------------------------------COMP_at:V-N-----------------------------------------------------------+ +---------------------------------------------------COMP_around:V-N--------------------------------------------------+ | +-----------SUBJ:V-N----------+ | +---------------------------COMP_of:N-N---------------------------+ | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | +------------COMP_by:N-N-----------+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,sites) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_at:V-N (protected,same) SUBJ:V-N (studies,protection) COMP_of:N-N (region,promoter) OBJ:V-N (protected,region) COMP_by:N-N (same,zinc) MOD_ATT:N-N (sites,DNase) COMP_around:V-N (protected,boxes) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (DNase,induced) Parse 462 +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ +-----------SUBJ:V-N----------+ +---------------------------COMP_of:N-N---------------------------+ | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) COMP_by:N-N (positions,zinc) COMP_of:N-N (region,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_at:N-N (region,positions) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,induced) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 463 +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ +---------------------------COMP_of:N-N---------------------------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_by:N-N (positions,zinc) COMP_of:N-N (region,promoter) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) COMP_at:N-N (region,positions) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,induced) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (DNase,induced) Parse 464 +----------------------------------------------------COMP_at:N-N---------------------------------------------------+ +---------------------------COMP_of:N-N---------------------------+ | +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +------------COMP_by:N-N-----------+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,promoter) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_by:N-N (same,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_at:N-N (region,same) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (DNase,induced) Parse 465 +---------------------------------------------------------------------COMP_by:N-N---------------------------------------------------------------------+ +-----------------------------------------------------------------COMP_as:N-N----------------------------------------------------------------+ | +--------------------------------------------------------COMP_at:N-N-------------------------------------------------------+ | | +-----------SUBJ:V-N----------+ +---------------------------COMP_of:N-N---------------------------+ | | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) COMP_of:N-N (region,promoter) MOD_ATT:N-N (promoter,GENEXXX) COMP_as:N-N (region,induced) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_at:N-N (region,positions) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) COMP_by:N-N (region,zinc) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,DNase) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 466 +-------------------------------------------------SUBJ:V-N-------------------------------------------------+ +-----------SUBJ:V-N----------+ +-----------OBJ:V-N-----------+ +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +--------COMP_by:N-N-------+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ +---COMP_as:N-N---+ | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) COMP_as:N-N (positions,induced) SUBJ:V-N (demonstrated,DNase) SUBJ:V-N (induced,DNase) COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) SUBJ:V-N (studies,protection) COMP_by:N-N (positions,zinc) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) Parse 467 +----------------------------------COMP_at:V-N---------------------------------+ +-----------SUBJ:V-N----------+ +--------------------------SUBJ:V-N--------------------------+-----------OBJ:V-N-----------+ | +------OBJ:V-N------+ | | +----OBJ:V-N----+------COMP_of:N-N-----+ | +------MOD_ATT:N-N-----+ +------------COMP_by:N-N-----------+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ | | +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . SUBJ:V-N (induced,GENEXXX) OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) COMP_of:N-N (region,promoter) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (boxes,0A) COMP_at:V-N (induced,same) MOD_ATT:N-ADJ (region,large) OBJ:V-N (induced,sites) COMP_by:N-N (same,zinc) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,DNase) COMP_as:N-N (positions,those) Parse 468 +---------------------------COMP_of:N-N---------------------------+ +----MOD_ATT:N-N----+ +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +------------COMP_by:N-N-----------+ | +MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . COMP_of:N-N (region,promoter) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (demonstrated,studies) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_by:N-N (same,zinc) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-N (studies,protection) MOD_ATT:N-N (studies,DNase) MOD_ATT:N-ADJ (region,large) COMP_as:N-N (positions,those) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 469 +------------------------------------------------------------COMP_at:V-N-----------------------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | +-----------SUBJ:V-N----------+ | | +----------------MOD_ATT:N-N---------------+ | +------OBJ:V-N------+ | +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ +------------COMP_by:N-N-----------+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) COMP_at:V-N (protected,same) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) COMP_by:N-N (same,zinc) SUBJ:V-N (studies,protection) MOD_ATT:N-ADJ (region,large) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (DNase,induced) Parse 470 +---------------------------------------------------------------------COMP_by:N-N---------------------------------------------------------------------+ +----------------------------------------------MOD_POST:N-ADJ----------------------------------------------+ | +---------------------------COMP_of:N-N---------------------------+ | | | +----------------MOD_ATT:N-N---------------+ | | +----OBJ:V-N----+ | +------MOD_ATT:N-N-----+ | | +MOD_ATT:N+MOD_ATT:N+-SUBJ:V-N+ +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . MOD_POST:N-ADJ (region,at) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-N (protection,DNase) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (sites,promoter) SUBJ:V-N (demonstrated,studies) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-N (studies,protection) COMP_by:N-N (region,zinc) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_ATT:N-ADJ (region,large) COMP_of:N-N (region,sites) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (DNase,induced) Parse 471 +---------------------------COMP_of:N-N---------------------------+ | +--------------------MOD_ATT:N-N-------------------+ +-----------SUBJ:V-N----------+ | | +----------------MOD_ATT:N-N---------------+ +------OBJ:V-N------+ | +----OBJ:V-N----+ | | +------MOD_ATT:N-N-----+ +------------COMP_by:N-N-----------+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ | | +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-N (sites,promoter) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_by:N-N (same,zinc) SUBJ:V-N (protected,GENEXXX) MOD_ATT:N-ADJ (region,large) MOD_ATT:N-N (sites,GENEXXX) COMP_of:N-N (region,sites) SUBJ:V-N (studies,protection) COMP_as:N-N (positions,those) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) Parse 472 +----------------------------------------------------COMP_at:N-N---------------------------------------------------+ +-----------SUBJ:V-N----------+ +---------------------------COMP_of:N-N---------------------------+ | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +------------COMP_by:N-N-----------+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) COMP_of:N-N (region,promoter) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (region,large) COMP_by:N-N (same,zinc) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_at:N-N (region,same) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (DNase,induced) Parse 473 +---------------------------------------------------------------------COMP_by:N-N---------------------------------------------------------------------+ +----------------------------------------------MOD_POST:N-ADJ----------------------------------------------+ | +-----------SUBJ:V-N----------+ +---------------------------COMP_of:N-N---------------------------+ | | +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ | | | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) MOD_ATT:N-ADJ (boxes,0A) COMP_of:N-N (region,promoter) MOD_ATT:N-N (promoter,GENEXXX) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) COMP_by:N-N (region,zinc) MOD_ATT:N-ADJ (sites,hypersensitive) MOD_POST:N-ADJ (region,at) MOD_ATT:N-ADJ (region,large) SUBJ:V-N (studies,protection) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) COMP_as:N-N (positions,those) MOD_ATT:N-ADJ (DNase,induced) Parse 474 +-----------SUBJ:V-N----------+ +---------------------------COMP_of:N-N---------------------------+ +------OBJ:V-N------+ | +----OBJ:V-N----+------COMP_of:N-N-----+ +------MOD_ATT:N-N-----+ +------------COMP_by:N-N-----------+ | +-SUBJ:V-N+ | +SUBJ:V-N+ +MOD_A+ +MOD_ATT+ +MOD_AT+ +MOD_ATT:N-+ +MOD_+ | +COMP_as:N-+ | | | | | | | | | | | | | | | | | | | | | DNase I protection studies demonstrated that GENEXXX protected a large region of the GENEXXX promoter and induced DNase I hypersensitive sites , particularly around the 0A boxes , at the same positions as those induced by zinc . OBJ:V-N (studies,DNase) SUBJ:V-N (demonstrated,DNase) COMP_of:N-N (region,promoter) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-ADJ (sites,hypersensitive) COMP_by:N-N (same,zinc) SUBJ:V-N (protected,GENEXXX) COMP_of:N-N (region,sites) MOD_ATT:N-ADJ (region,large) SUBJ:V-N (studies,protection) COMP_as:N-N (positions,those) OBJ:V-N (protected,region) MOD_ATT:N-N (sites,DNase) MOD_ATT:N-ADJ (boxes,0A) MOD_ATT:N-ADJ (DNase,induced) PMID: 9006059-4 Sentence 5 Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . Parse 0 +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ +-MOD_ATT:N-ADJ-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 1 +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ +-MOD_ATT:N-ADJ-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) Parse 2 +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 3 +-----MOD_ATT:N-ADJ----+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 4 +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +--MOD_ATT:N-N-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) Parse 5 +--------------------SUBJ:V-N--------------------+ +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +--MOD_ATT:N-N-+ | +--MOD_ATT:N-N--+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | | | +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) MOD_ATT:N-ADJ (sites,strong) Parse 6 +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ +-MOD_ATT:N-ADJ-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 7 +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ +-MOD_ATT:N-ADJ-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 8 +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 9 +-----MOD_ATT:N-ADJ----+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 10 +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) Parse 11 +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +--MOD_ATT:N-N-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) Parse 12 +--------------------SUBJ:V-N--------------------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ +-MOD_ATT:N-ADJ-+ +-------COMP_in:V_PASS-N-------+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 13 +--------------------SUBJ:V-N--------------------+ +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) MOD_ATT:N-ADJ (sites,strong) MOD_ATT:N-N (promoter,GENEXXX) Parse 14 +--------------------SUBJ:V-N--------------------+ +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) MOD_ATT:N-ADJ (sites,strong) MOD_ATT:N-N (promoter,GENEXXX) Parse 15 +---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ +-MOD_ATT:N-ADJ-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) APPOS (region,SPXXX) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 16 +---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) APPOS (region,SPXXX) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) MOD_ATT:N-ADJ (sites,strong) MOD_ATT:N-N (promoter,GENEXXX) Parse 17 +-------COMP_in:V_PASS-N-------+---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ +-MOD_ATT:N-ADJ-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) APPOS (region,SPXXX) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) Parse 18 +-----MOD_ATT:N-ADJ----+ +---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) APPOS (region,SPXXX) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) MOD_ATT:N-ADJ (sites,strong) MOD_ATT:N-N (promoter,GENEXXX) Parse 19 +-----MOD_ATT:N-ADJ----+ +---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) APPOS (region,SPXXX) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) MOD_ATT:N-ADJ (sites,strong) MOD_ATT:N-N (promoter,GENEXXX) Parse 20 +-----MOD_ATT:N-ADJ----+ +---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) APPOS (region,SPXXX) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) MOD_ATT:N-ADJ (sites,strong) MOD_ATT:N-N (promoter,GENEXXX) Parse 21 +-----MOD_ATT:N-ADJ----+ +---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) APPOS (region,SPXXX) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) MOD_ATT:N-ADJ (sites,strong) MOD_ATT:N-N (promoter,GENEXXX) Parse 22 +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | +--MOD_ATT:N-N-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) APPOS (region,SPXXX) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) MOD_ATT:N-ADJ (sites,strong) Parse 23 +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ +-MOD_ATT:N-ADJ-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 24 +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ +-MOD_ATT:N-ADJ-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) Parse 25 +-----MOD_ATT:N-ADJ----+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) MOD_ATT:N-ADJ (sites,strong) MOD_ATT:N-N (promoter,GENEXXX) Parse 26 +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ | +-MOD_ATT:N-ADJ-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (overlapping,site) Parse 27 +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ | +-----MOD_ATT:N-ADJ----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (overlapping,site) Parse 28 +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ +-MOD_ATT:N-ADJ-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 29 +--------------------------------------------OBJ:V-N-------------------------------------------+ +-----MOD_ATT:N-ADJ----+ +------------OBJ:V-N------------+ | | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (overlapping,site) Parse 30 +--------------------------------------------OBJ:V-N-------------------------------------------+ +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ | | +--MOD_ATT:N-N-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (overlapping,site) Parse 31 +-----------------------OBJ:V-N-----------------------+ +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | +-----MOD_ATT:N-ADJ----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,start) COMP_in:V_PASS-N (mapped,region) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) Parse 32 +-----MOD_ATT:N-ADJ----+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 33 +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) Parse 34 +-----------------------OBJ:V-N-----------------------+ +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | +-MOD_ATT:N-ADJ-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,start) COMP_in:V_PASS-N (mapped,region) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) Parse 35 +-----------------------OBJ:V-N-----------------------+ +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | +-----MOD_ATT:N-ADJ----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,start) COMP_in:V_PASS-N (mapped,region) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) Parse 36 +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,start) COMP_in:V_PASS-N (mapped,region) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 37 +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,start) COMP_in:V_PASS-N (mapped,region) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 38 +--------------------SUBJ:V-N--------------------+-----------------------OBJ:V-N-----------------------+ +-------COMP_in:V_PASS-N-------+ | +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | +-MOD_ATT:N-ADJ-+ | +--MOD_ATT:N-N--+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,start) OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) Parse 39 +--------------------SUBJ:V-N--------------------+-----------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | | +---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,start) COMP_in:V_PASS-N (mapped,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (encompassing,-10) Parse 40 +--------------------SUBJ:V-N--------------------+-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,start) OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 41 +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) Parse 42 +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) Parse 43 +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 44 +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) Parse 45 +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +--MOD_ATT:N-N-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) Parse 46 +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +--MOD_ATT:N-N-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (encompassing,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) Parse 47 +--------------------SUBJ:V-N--------------------+ +-------COMP_in:V_PASS-N-------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ +-MOD_ATT:N-ADJ-+ | +--MOD_ATT:N-N--+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) Parse 48 +--------------------SUBJ:V-N--------------------+ +-------COMP_in:V_PASS-N-------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ | +--MOD_ATT:N-N--+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) MOD_ATT:N-ADJ (sites,strong) Parse 49 +--------------------SUBJ:V-N--------------------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | | +---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (binding,GENEXXX) COMP_in:V_PASS-N (mapped,region) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (encompassing,-10) Parse 50 +--------------------SUBJ:V-N--------------------+ +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +--MOD_ATT:N-N-+ | +--MOD_ATT:N-N--+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | | +---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) COMP_in:V_PASS-N (mapped,region) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (encompassing,-10) Parse 51 +--------------------SUBJ:V-N--------------------+ +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +--MOD_ATT:N-N-+ | +--MOD_ATT:N-N--+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | | +---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) COMP_in:V_PASS-N (mapped,region) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (encompassing,-10) Parse 52 +-----------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | +-MOD_ATT:N-ADJ-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,start) COMP_in:V_PASS-N (mapped,region) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 53 +-----------------------OBJ:V-N-----------------------+ +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | +-MOD_ATT:N-ADJ-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,start) COMP_in:V_PASS-N (mapped,region) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) Parse 54 +--------------------SUBJ:V-N--------------------+-----------------------OBJ:V-N-----------------------+ +-------COMP_in:V_PASS-N-------+ | +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | +-MOD_ATT:N-ADJ-+ | +--MOD_ATT:N-N--+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | +---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,start) COMP_in:V_PASS-N (mapped,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) OBJ:V-N (encompassing,-10) Parse 55 +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ +-MOD_ATT:N-ADJ-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 56 +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ +-MOD_ATT:N-ADJ-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 57 +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 58 +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +--MOD_ATT:N-N-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (encompassing,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) Parse 59 +--------------------SUBJ:V-N--------------------+ +-------COMP_in:V_PASS-N-------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ +-MOD_ATT:N-ADJ-+ | +--MOD_ATT:N-N--+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | +---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (binding,GENEXXX) COMP_in:V_PASS-N (mapped,region) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) OBJ:V-N (encompassing,-10) Parse 60 +--------------------SUBJ:V-N--------------------+ +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | +---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) COMP_in:V_PASS-N (mapped,region) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (encompassing,-10) Parse 61 +-----------------------OBJ:V-N-----------------------+ +-------COMP_in:V_PASS-N-------+---------------------APPOS---------------------+ +---------------------OBJ:V-N--------------------+ | +-MOD_ATT:N-ADJ-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,start) OBJ:V-N (encompassing,region) APPOS (region,SPXXX) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) Parse 62 +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+---------------------APPOS---------------------+ +---------------------OBJ:V-N--------------------+ | | +--MOD_ATT:N-N-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,start) OBJ:V-N (encompassing,region) APPOS (region,SPXXX) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) Parse 63 +---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ +-MOD_ATT:N-ADJ-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) APPOS (region,SPXXX) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 64 +-----------------------OBJ:V-N-----------------------+ +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | +-MOD_ATT:N-ADJ-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,start) OBJ:V-N (encompassing,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) Parse 65 +-----------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,start) OBJ:V-N (encompassing,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 66 +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,start) OBJ:V-N (encompassing,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 67 +-----------------------OBJ:V-N-----------------------+ +-------COMP_in:V_PASS-N-------+---------------------APPOS---------------------+ +---------------------OBJ:V-N--------------------+ | +-MOD_ATT:N-ADJ-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) APPOS (region,SPXXX) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,start) COMP_in:V_PASS-N (mapped,region) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) OBJ:V-N (encompassing,-10) Parse 68 +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ +---------------------APPOS---------------------+ +---------------------OBJ:V-N--------------------+ | | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) APPOS (region,SPXXX) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (region,promoter) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) OBJ:V-N (encompassing,start) COMP_in:V_PASS-N (mapped,region) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (encompassing,-10) Parse 69 +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) MOD_ATT:N-ADJ (sites,strong) Parse 70 +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) MOD_ATT:N-ADJ (sites,strong) MOD_ATT:N-N (promoter,GENEXXX) Parse 71 +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) MOD_ATT:N-ADJ (sites,strong) Parse 72 +---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ +-MOD_ATT:N-ADJ-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) APPOS (region,SPXXX) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (binding,GENEXXX) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (encompassing,-10) Parse 73 +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ | +-MOD_ATT:N-ADJ-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) APPOS (region,one) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (overlapping,site) Parse 74 +-------COMP_in:V_PASS-N-------+---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ +-MOD_ATT:N-ADJ-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) APPOS (region,SPXXX) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (binding,GENEXXX) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) OBJ:V-N (encompassing,-10) Parse 75 +-----MOD_ATT:N-ADJ----+ +---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) APPOS (region,SPXXX) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (encompassing,-10) Parse 76 +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ | +-----MOD_ATT:N-ADJ----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (overlapping,site) Parse 77 +--------------------------------------------OBJ:V-N-------------------------------------------+ +-----MOD_ATT:N-ADJ----+ +------------OBJ:V-N------------+ | | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (overlapping,site) Parse 78 +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ | +-----MOD_ATT:N-ADJ----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (overlapping,site) Parse 79 +-----MOD_ATT:N-ADJ----+ +---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) APPOS (region,SPXXX) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (encompassing,-10) Parse 80 +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ +-MOD_ATT:N-ADJ-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (binding,GENEXXX) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (encompassing,-10) Parse 81 +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (binding,GENEXXX) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (encompassing,-10) Parse 82 +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (binding,GENEXXX) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (encompassing,-10) Parse 83 +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ | +-MOD_ATT:N-ADJ-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) OBJ:V-N (overlapping,site) Parse 84 +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ | +-----MOD_ATT:N-ADJ----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (overlapping,site) Parse 85 +-----------------------OBJ:V-N-----------------------+ +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | +-----MOD_ATT:N-ADJ----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,start) COMP_in:V_PASS-N (mapped,region) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (encompassing,-10) Parse 86 +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +--MOD_ATT:N-N-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) OBJ:V-N (encompassing,start) COMP_in:V_PASS-N (mapped,region) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (encompassing,-10) Parse 87 +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ +-MOD_ATT:N-ADJ-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (binding,GENEXXX) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) OBJ:V-N (encompassing,-10) Parse 88 +-----MOD_ATT:N-ADJ----+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (encompassing,-10) Parse 89 +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +--MOD_ATT:N-N-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) Parse 90 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-MOD_ATT:N-ADJ-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) Parse 91 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (site,start) Parse 92 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-MOD_ATT:N-ADJ-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) Parse 93 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) Parse 94 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-MOD_ATT:N-ADJ-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (site,start) Parse 95 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-MOD_ATT:N-ADJ-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) Parse 96 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) Parse 97 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-MOD_ATT:N-ADJ-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) Parse 98 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (site,start) Parse 99 +--------------------SUBJ:V-N--------------------+ +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +--MOD_ATT:N-N-+ | +--MOD_ATT:N-N--+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) MOD_ATT:N-ADJ (sites,strong) Parse 100 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) Parse 101 +---------------SUBJ:V-N---------------+ +--------------------SUBJ:V-N--------------------+ +-------------OBJ:V-N------------+ | | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-MOD_ATT:N-ADJ-+ | +------------OBJ:V-N-----------+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) SUBJ:V-N (encompassing,one) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 102 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) SUBJ:V-N (encompassing,one) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 103 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+ | +-----MOD_ATT:N-ADJ----+ | | | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | +------------OBJ:V-N-----------+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | | +MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) SUBJ:V-N (encompassing,one) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 104 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | +-MOD_ATT:N-ADJ-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) APPOS (region,SPXXX) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 105 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | +-MOD_ATT:N-ADJ-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) APPOS (region,SPXXX) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (site,start) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 106 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | | +---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) APPOS (region,SPXXX) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 107 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) APPOS (region,SPXXX) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 108 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | +-MOD_ATT:N-ADJ-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) APPOS (region,SPXXX) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 109 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) APPOS (region,SPXXX) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 110 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) APPOS (region,SPXXX) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 111 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) APPOS (region,SPXXX) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 112 +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +--MOD_ATT:N-N-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) MOD_ATT:N-ADJ (sites,strong) Parse 113 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 114 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 115 +--------------------------------------------OBJ:V-N-------------------------------------------+ +--------------------------OBJ:V-N-------------------------+ | | +--------MOD_ATT:N-N-------+ | +-MOD_ATT:N-ADJ-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+ | +--MOD_ATT:N-ADJ--+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,SPXXX) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-ADJ (region,encompassing) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (overlapping,region) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (overlapping,site) Parse 116 +--------------------------------------------OBJ:V-N-------------------------------------------+ +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ | | +--MOD_ATT:N-N-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (overlapping,site) Parse 117 +--------------------------------------------OBJ:V-N-------------------------------------------+ +--------------------------OBJ:V-N-------------------------+ | | +--------MOD_ATT:N-N-------+ | +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+ | +--MOD_ATT:N-ADJ--+ | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) MOD_ATT:N-N (region,SPXXX) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (region,encompassing) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (overlapping,region) MOD_ATT:N-ADJ (sites,strong) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (overlapping,site) Parse 118 +--------------------------------------------OBJ:V-N-------------------------------------------+ +--------------------------OBJ:V-N-------------------------+ | +-----MOD_ATT:N-ADJ----+ | +--------MOD_ATT:N-N-------+ | | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+ | +--MOD_ATT:N-ADJ--+ +-MOD_ATT:N-ADJ-+ | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,SPXXX) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (region,encompassing) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (overlapping,region) MOD_ATT:N-ADJ (sites,strong) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (overlapping,site) Parse 119 +---------------SUBJ:V-N---------------+ +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------------OBJ:V-N------------+ | +------------OBJ:V-N------------+ | | +-MOD_ATT:N-ADJ-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) OBJ:V-N (overlapping,site) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (promoter,GENEXXX) Parse 120 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------------------------------OBJ:V-N-------------------------------------------+ | +-----MOD_ATT:N-ADJ----+ | | +------------OBJ:V-N------------+ | | | +--MOD_ATT:N-N-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | | +MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) OBJ:V-N (overlapping,site) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (promoter,GENEXXX) Parse 121 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------------------------------OBJ:V-N-------------------------------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ | | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) OBJ:V-N (overlapping,site) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (region,GENEXXX) Parse 122 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-MOD_ATT:N-ADJ-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) Parse 123 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) Parse 124 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,GENEXXX) Parse 125 +--------------------------------------------OBJ:V-N-------------------------------------------+ +--------------------------OBJ:V-N-------------------------+ | | +--------MOD_ATT:N-N-------+ | +-MOD_ATT:N-ADJ-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+ | +--MOD_ATT:N-ADJ--+ | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | | | +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) MOD_ATT:N-N (region,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-ADJ (region,encompassing) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (overlapping,region) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (overlapping,site) Parse 126 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------------------------------OBJ:V-N-------------------------------------------+ | +-----MOD_ATT:N-ADJ----+ | | +------------OBJ:V-N------------+ | | | +--MOD_ATT:N-N-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (overlapping,site) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) Parse 127 +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,start) COMP_in:V_PASS-N (mapped,region) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 128 +---------------SUBJ:V-N---------------+ +-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ | +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,start) OBJ:V-N (overlapping,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) Parse 129 +---------------SUBJ:V-N---------------+ +-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +-MOD_ATT:N-ADJ-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,start) OBJ:V-N (overlapping,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,GENEXXX) Parse 130 +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,transcriptional) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 131 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | | +MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (site,start) Parse 132 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | | | +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) SUBJ:V-N (encompassing,one) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,GENEXXX) Parse 133 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | | | +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) SUBJ:V-N (encompassing,one) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,GENEXXX) Parse 134 +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +--MOD_ATT:N-N-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,start) COMP_in:V_PASS-N (mapped,region) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) Parse 135 +---------------SUBJ:V-N---------------+ +-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ | +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +-MOD_ATT:N-ADJ-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,start) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 136 +---------------SUBJ:V-N---------------+ +-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ | +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +-MOD_ATT:N-ADJ-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,start) OBJ:V-N (overlapping,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) Parse 137 +---------------SUBJ:V-N---------------+ +-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +-MOD_ATT:N-ADJ-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,start) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 138 +---------------SUBJ:V-N---------------+ +-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +-----MOD_ATT:N-ADJ----+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,start) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 139 +---------------SUBJ:V-N---------------+ +-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +-----MOD_ATT:N-ADJ----+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,start) OBJ:V-N (overlapping,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,GENEXXX) Parse 140 +---------------SUBJ:V-N---------------+ +--------------------SUBJ:V-N--------------------+-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ | | +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | | +---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,-35) SUBJ:V-N (encompassing,one) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,start) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) Parse 141 +---------------SUBJ:V-N---------------+ +--------------------SUBJ:V-N--------------------+-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ | +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +-----MOD_ATT:N-ADJ----+ | | +--MOD_ATT:N-N--+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,SPXXX) SUBJ:V-N (encompassing,one) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,start) MOD_ATT:N-ADJ (start,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 142 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ | +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,SPXXX) SUBJ:V-N (encompassing,one) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,start) MOD_ATT:N-ADJ (start,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 143 +-----------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | +-MOD_ATT:N-ADJ-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,transcriptional) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 144 +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,transcriptional) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 145 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-MOD_ATT:N-ADJ-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (site,start) Parse 146 +--------------------SUBJ:V-N--------------------+ +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | | +---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) COMP_in:V_PASS-N (mapped,region) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (encompassing,-10) Parse 147 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) Parse 148 +--------------------SUBJ:V-N--------------------+-----------------------OBJ:V-N-----------------------+ | +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | +-MOD_ATT:N-ADJ-+ +-------COMP_in:V_PASS-N-------+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) OBJ:V-N (encompassing,transcriptional) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 149 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) Parse 150 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | | +MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (site,start) Parse 151 +---------------SUBJ:V-N---------------+ +--------------------SUBJ:V-N--------------------+ +-------------OBJ:V-N------------+ | | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-MOD_ATT:N-ADJ-+ | +------------OBJ:V-N-----------+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) SUBJ:V-N (encompassing,one) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 152 +--------------------SUBJ:V-N--------------------+-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+ | +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | +--MOD_ATT:N-N-+ | +--MOD_ATT:N-N--+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | +---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) OBJ:V-N (encompassing,transcriptional) COMP_in:V_PASS-N (mapped,region) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (encompassing,-10) Parse 153 +---------------SUBJ:V-N---------------+ +--------------------SUBJ:V-N--------------------+ +-------------OBJ:V-N------------+ | | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) SUBJ:V-N (encompassing,one) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 154 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | | +---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) SUBJ:V-N (encompassing,one) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,GENEXXX) Parse 155 +---------------SUBJ:V-N---------------+ +--------------------SUBJ:V-N--------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | | +--MOD_ATT:N-N--+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | | +---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) SUBJ:V-N (encompassing,one) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,GENEXXX) Parse 156 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) SUBJ:V-N (encompassing,one) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 157 +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,start) COMP_in:V_PASS-N (mapped,region) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 158 +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +--MOD_ATT:N-N-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,start) COMP_in:V_PASS-N (mapped,region) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) Parse 159 +--------------------SUBJ:V-N--------------------+-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | +---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) OBJ:V-N (encompassing,start) COMP_in:V_PASS-N (mapped,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (encompassing,-10) Parse 160 +--------------------SUBJ:V-N--------------------+-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+ | +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +--MOD_ATT:N-N-+ | +--MOD_ATT:N-N--+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | +---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) OBJ:V-N (encompassing,start) COMP_in:V_PASS-N (mapped,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (encompassing,-10) Parse 161 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) OBJ:V-N (encompassing,start) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 162 +---------------SUBJ:V-N---------------+ +--------------------SUBJ:V-N--------------------+-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ | | +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | +---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,SPXXX) SUBJ:V-N (encompassing,one) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,start) MOD_ATT:N-ADJ (start,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 163 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | | | +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | | +--MOD_ATT:N-N-+ | +------------OBJ:V-N-----------+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | | +MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | +---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,SPXXX) SUBJ:V-N (encompassing,one) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) OBJ:V-N (encompassing,start) MOD_ATT:N-ADJ (start,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 164 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ | +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | +---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,SPXXX) SUBJ:V-N (encompassing,one) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) OBJ:V-N (encompassing,start) MOD_ATT:N-ADJ (start,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 165 +-----MOD_ATT:N-ADJ----+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) SUBJ:V-N (encompassing,region) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (encompassing,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 166 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-MOD_ATT:N-ADJ-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) Parse 167 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-MOD_ATT:N-ADJ-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (site,start) Parse 168 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-MOD_ATT:N-ADJ-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) Parse 169 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (site,start) Parse 170 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) Parse 171 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) Parse 172 +---------------SUBJ:V-N---------------+ +--------------------SUBJ:V-N--------------------+ +-------------OBJ:V-N------------+ | | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | +---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) SUBJ:V-N (encompassing,one) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 173 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+ | +-----MOD_ATT:N-ADJ----+ | | | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | +------------OBJ:V-N-----------+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | +---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) SUBJ:V-N (encompassing,one) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 174 +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ +---------------------APPOS---------------------+ +---------------------OBJ:V-N--------------------+ | | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,start) OBJ:V-N (encompassing,region) APPOS (region,SPXXX) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (region,promoter) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 175 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+ | +-----MOD_ATT:N-ADJ----+ | | | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | +------------OBJ:V-N-----------+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | | +MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | +---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) SUBJ:V-N (encompassing,one) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 176 +---------------SUBJ:V-N---------------+ +-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +---------------------OBJ:V-N--------------------+ | | +-MOD_ATT:N-ADJ-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) APPOS (region,SPXXX) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,start) MOD_ATT:N-ADJ (start,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 177 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +---------------------OBJ:V-N--------------------+ | | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) APPOS (region,SPXXX) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,start) MOD_ATT:N-ADJ (start,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 178 +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | +--MOD_ATT:N-N-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) APPOS (region,SPXXX) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) MOD_ATT:N-ADJ (sites,strong) Parse 179 +-----------------------OBJ:V-N-----------------------+ +-------COMP_in:V_PASS-N-------+---------------------APPOS---------------------+ +---------------OBJ:V-N---------------+ | +-MOD_ATT:N-ADJ-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) APPOS (region,SPXXX) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,transcriptional) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) OBJ:V-N (encompassing,-10) Parse 180 +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ +---------------------APPOS---------------------+ +---------------OBJ:V-N---------------+ | | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) APPOS (region,SPXXX) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) OBJ:V-N (encompassing,transcriptional) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 181 +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+---------------------APPOS---------------------+ +---------------OBJ:V-N---------------+ | | +--MOD_ATT:N-N-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) APPOS (region,SPXXX) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) OBJ:V-N (encompassing,transcriptional) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) Parse 182 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | +-MOD_ATT:N-ADJ-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) APPOS (region,SPXXX) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 183 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | | +---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | | +MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) APPOS (region,SPXXX) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 184 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) APPOS (region,SPXXX) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 185 +---------------SUBJ:V-N---------------+ +-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +-MOD_ATT:N-ADJ-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,start) MOD_ATT:N-ADJ (start,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 186 +---------------SUBJ:V-N---------------+ +-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ | +---------------------APPOS---------------------+ +---------------------OBJ:V-N--------------------+ | | +-MOD_ATT:N-ADJ-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) APPOS (region,SPXXX) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,start) MOD_ATT:N-ADJ (start,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 187 +---------------SUBJ:V-N---------------+ +-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +---------------------OBJ:V-N--------------------+ | | +-----MOD_ATT:N-ADJ----+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) APPOS (region,SPXXX) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,start) MOD_ATT:N-ADJ (start,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 188 +---------------SUBJ:V-N---------------+ +-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +---------------------OBJ:V-N--------------------+ | | +-----MOD_ATT:N-ADJ----+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) APPOS (region,SPXXX) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,start) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 189 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +---------------------OBJ:V-N--------------------+ | | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) APPOS (region,SPXXX) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) OBJ:V-N (encompassing,start) MOD_ATT:N-ADJ (start,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 190 +-----------------------OBJ:V-N-----------------------+ +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | +-MOD_ATT:N-ADJ-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-ADJ (binding,strong) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,transcriptional) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (encompassing,-10) Parse 191 +-----------------------OBJ:V-N-----------------------+ +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | +-----MOD_ATT:N-ADJ----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,transcriptional) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (encompassing,-10) Parse 192 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-MOD_ATT:N-ADJ-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 193 +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | +--MOD_ATT:N-N-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) APPOS (region,SPXXX) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (encompassing,-10) Parse 194 +--------------------------------------------OBJ:V-N-------------------------------------------+ +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ | | +--MOD_ATT:N-N-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (encompassing,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (overlapping,site) Parse 195 +---------------SUBJ:V-N---------------+ +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------------OBJ:V-N------------+ | +------------OBJ:V-N------------+ | | +-MOD_ATT:N-ADJ-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) OBJ:V-N (overlapping,site) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (promoter,GENEXXX) Parse 196 +---------------SUBJ:V-N---------------+ +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ | | +-MOD_ATT:N-ADJ-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) OBJ:V-N (overlapping,site) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (region,GENEXXX) Parse 197 +---------------SUBJ:V-N---------------+ +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ | | +-MOD_ATT:N-ADJ-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) OBJ:V-N (overlapping,site) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (region,GENEXXX) Parse 198 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | +-MOD_ATT:N-ADJ-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) APPOS (region,SPXXX) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (site,start) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 199 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | +-MOD_ATT:N-ADJ-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) APPOS (region,SPXXX) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (site,start) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 200 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------------------------------OBJ:V-N-------------------------------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ | | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) OBJ:V-N (overlapping,site) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (region,GENEXXX) Parse 201 +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +--MOD_ATT:N-N-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) OBJ:V-N (encompassing,start) COMP_in:V_PASS-N (mapped,region) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (encompassing,-10) Parse 202 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-MOD_ATT:N-ADJ-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 203 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-MOD_ATT:N-ADJ-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 204 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-MOD_ATT:N-ADJ-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 205 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 206 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | | +MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 207 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,GENEXXX) Parse 208 +---------------SUBJ:V-N---------------+ +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------------OBJ:V-N------------+ | +------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (overlapping,site) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) Parse 209 +---------------SUBJ:V-N---------------+ +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------------OBJ:V-N------------+ | +------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (overlapping,site) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) Parse 210 +---------------SUBJ:V-N---------------+ +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ | | +-MOD_ATT:N-ADJ-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (overlapping,site) OBJ:V-N (encompassing,region) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,GENEXXX) Parse 211 +---------------SUBJ:V-N---------------+ +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (overlapping,site) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,GENEXXX) Parse 212 +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) OBJ:V-N (encompassing,start) COMP_in:V_PASS-N (mapped,region) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (encompassing,-10) Parse 213 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | | +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | | +--MOD_ATT:N-N-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | | +MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) OBJ:V-N (encompassing,start) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) Parse 214 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) OBJ:V-N (encompassing,start) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,GENEXXX) Parse 215 +-----MOD_ATT:N-ADJ----+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (encompassing,region) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (encompassing,-10) Parse 216 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-MOD_ATT:N-ADJ-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,GENEXXX) Parse 217 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-------OBJ:V-N------+ | | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ +------------OBJ:V-N-----------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) SUBJ:V-N (encompassing,region) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (site,start) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) Parse 218 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,GENEXXX) APPOS (region,one) SUBJ:V-N (encompassing,region) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (site,start) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) OBJ:V-N (binding,sites) Parse 219 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | | +MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (site,start) Parse 220 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ | +--MOD_ATT:N-N--+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | | | +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,Two) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (mapped,region) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,GENEXXX) APPOS (region,one) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) SUBJ:V-N (encompassing,one) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) Parse 221 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ | +--MOD_ATT:N-N--+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | | | +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,GENEXXX) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) SUBJ:V-N (encompassing,one) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) Parse 222 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+ | +-----MOD_ATT:N-ADJ----+ | | | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | +------------OBJ:V-N-----------+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | | +MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | | | +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) SUBJ:V-N (encompassing,one) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) Parse 223 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | +------COMP_in:V-N-----+ | | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | | | +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) SUBJ:V-N (encompassing,one) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) Parse 224 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,GENEXXX) APPOS (region,one) SUBJ:V-N (encompassing,region) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (site,start) OBJ:V-N (overlapping,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,sites) Parse 225 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-------OBJ:V-N------+ | | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ +------------OBJ:V-N-----------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) APPOS (region,one) SUBJ:V-N (encompassing,region) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (site,start) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) Parse 226 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,GENEXXX) APPOS (region,one) SUBJ:V-N (encompassing,region) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (site,start) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,sites) Parse 227 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-MOD_ATT:N-ADJ-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (site,start) Parse 228 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) Parse 229 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (site,start) Parse 230 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+ +-------OBJ:V-N------+ | | | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ +------------OBJ:V-N-----------+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (mapped,region) APPOS (region,one) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) Parse 231 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+ +-------OBJ:V-N------+ | | | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ +------------OBJ:V-N-----------+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) Parse 232 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ | +--MOD_ATT:N-N--+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) MOD_ATT:N-N (region,GENEXXX) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) Parse 233 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+ | +-----MOD_ATT:N-ADJ----+ | | | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | +------------OBJ:V-N-----------+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) SUBJ:V-N (encompassing,one) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 234 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | +------COMP_in:V-N-----+ | | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | | +MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) SUBJ:V-N (encompassing,one) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 235 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-------OBJ:V-N------+ | | +---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) APPOS (region,SPXXX) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,region) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) Parse 236 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | +-MOD_ATT:N-ADJ-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) APPOS (region,SPXXX) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (site,start) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 237 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,GENEXXX) APPOS (region,one) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) Parse 238 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-------OBJ:V-N------+ | | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) Parse 239 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 240 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-MOD_ATT:N-ADJ-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 241 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | | +MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 242 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ | | +------SUBJ:V-N-----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (region,GENEXXX) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (overlapping,site) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) Parse 243 +--------------------------------------------OBJ:V-N-------------------------------------------+ +---------------SUBJ:V-N---------------+ +--------------------------OBJ:V-N-------------------------+ | +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ | +--------MOD_ATT:N-N-------+ | | +-----MOD_ATT:N-ADJ----+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +--MOD_ATT:N-ADJ--+ | | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) OBJ:V-N (overlapping,site) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-ADJ (region,encompassing) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (overlapping,region) MOD_ATT:N-ADJ (sites,strong) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (region,GENEXXX) Parse 244 +--------------------------------------------OBJ:V-N-------------------------------------------+ +---------------SUBJ:V-N---------------+ +--------------------------OBJ:V-N-------------------------+ | +-------------OBJ:V-N------------+ | | +--------MOD_ATT:N-N-------+ | | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +--MOD_ATT:N-ADJ--+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) OBJ:V-N (overlapping,site) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-ADJ (region,encompassing) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (overlapping,region) MOD_ATT:N-ADJ (sites,strong) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (promoter,GENEXXX) Parse 245 +---------------SUBJ:V-N---------------+ +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------------OBJ:V-N------------+ | +--------------------------OBJ:V-N-------------------------+ | | +-----MOD_ATT:N-ADJ----+ | | | +--------MOD_ATT:N-N-------+ | | | +--MOD_ATT:N-N-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +--MOD_ATT:N-ADJ--+ +-MOD_ATT:N-ADJ-+ | | | +MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) OBJ:V-N (overlapping,site) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-ADJ (region,encompassing) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (overlapping,region) MOD_ATT:N-ADJ (sites,strong) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (promoter,GENEXXX) Parse 246 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) Parse 247 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------OBJ:V-N------+ | | +------------OBJ:V-N------------+ | | +------SUBJ:V-N-----+ +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) OBJ:V-N (overlapping,site) Parse 248 +---------------SUBJ:V-N---------------+ +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ | | +-MOD_ATT:N-ADJ-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (overlapping,site) OBJ:V-N (encompassing,region) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) Parse 249 +---------------SUBJ:V-N---------------+ +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------------OBJ:V-N------------+ | +--------------------------OBJ:V-N-------------------------+ | | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ | +--------MOD_ATT:N-N-------+ | | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +--MOD_ATT:N-ADJ--+ | | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | | | +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,SPXXX) OBJ:V-N (overlapping,region) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-ADJ (region,encompassing) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (overlapping,site) MOD_ATT:N-ADJ (sites,strong) MOD_ATT:N-N (region,GENEXXX) Parse 250 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +------SUBJ:V-N-----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,GENEXXX) APPOS (region,one) SUBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) OBJ:V-N (encompassing,start) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) OBJ:V-N (binding,sites) Parse 251 +---------------SUBJ:V-N---------------+ +-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +-----MOD_ATT:N-ADJ----+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,start) OBJ:V-N (overlapping,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) Parse 252 +---------------SUBJ:V-N---------------+ +--------------------SUBJ:V-N--------------------+-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ | +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +-MOD_ATT:N-ADJ-+ | +------COMP_in:V-N-----+ | | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | | | +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,-35) SUBJ:V-N (encompassing,one) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,start) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) Parse 253 +---------------SUBJ:V-N---------------+ +--------------------SUBJ:V-N--------------------+-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ | +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +-----MOD_ATT:N-ADJ----+ | +------COMP_in:V-N-----+ | | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | | | +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,-35) SUBJ:V-N (encompassing,one) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,start) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) Parse 254 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-------OBJ:V-N------+ | | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ +------------OBJ:V-N-----------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) SUBJ:V-N (encompassing,region) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (site,start) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) Parse 255 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,GENEXXX) APPOS (region,one) SUBJ:V-N (encompassing,region) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (site,start) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) OBJ:V-N (binding,sites) Parse 256 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (site,start) Parse 257 +--------------------SUBJ:V-N--------------------+-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | | | +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) OBJ:V-N (encompassing,transcriptional) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 258 +--------------------SUBJ:V-N--------------------+-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | +--MOD_ATT:N-N-+ +-------COMP_in:V_PASS-N-------+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ:V_PAS+ +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | | +---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) SUBJ:V_PASS-N (mapped,sites) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) OBJ:V-N (encompassing,transcriptional) COMP_in:V_PASS-N (mapped,region) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (encompassing,-10) Parse 259 +---------------SUBJ:V-N---------------+ +-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | +-----MOD_ATT:N-ADJ----+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) Parse 260 +---------------SUBJ:V-N---------------+ +--------------------SUBJ:V-N--------------------+-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ | | +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | +-MOD_ATT:N-ADJ-+ | +------------OBJ:V-N-----------+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | | | +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) SUBJ:V-N (encompassing,one) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) Parse 261 +---------------SUBJ:V-N---------------+ +--------------------SUBJ:V-N--------------------+-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ | | +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | | +---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) SUBJ:V-N (encompassing,one) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) Parse 262 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ +-------OBJ:V-N------+ | | +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +------SUBJ:V-N-----+ +------------OBJ:V-N-----------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) APPOS (region,one) SUBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) OBJ:V-N (encompassing,start) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) Parse 263 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ +-------OBJ:V-N------+ | | +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +------SUBJ:V-N-----+ +------------OBJ:V-N-----------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) SUBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (were,GENEXXX) OBJ:V-N (encompassing,site) OBJ:V-N (were,Two) OBJ:V-N (encompassing,start) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (encompassing,-10) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) Parse 264 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +------SUBJ:V-N-----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,GENEXXX) APPOS (region,one) SUBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) OBJ:V-N (encompassing,start) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,sites) Parse 265 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +------SUBJ:V-N-----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,GENEXXX) APPOS (region,one) SUBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (were,GENEXXX) OBJ:V-N (encompassing,site) OBJ:V-N (were,Two) OBJ:V-N (encompassing,start) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (encompassing,-10) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) OBJ:V-N (binding,sites) Parse 266 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | | +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | | +--MOD_ATT:N-N-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | | +MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,start) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 267 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | | +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | | +--MOD_ATT:N-N-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | | +MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) OBJ:V-N (encompassing,start) OBJ:V-N (overlapping,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) Parse 268 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,start) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 269 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+-----------------------OBJ:V-N-----------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ | +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +------SUBJ:V-N-----+ | +--MOD_ATT:N-N--+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) MOD_ATT:N-N (region,GENEXXX) APPOS (region,one) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,start) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,sites) Parse 270 +---------------SUBJ:V-N---------------+ +--------------------SUBJ:V-N--------------------+-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ | +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +-MOD_ATT:N-ADJ-+ | +------COMP_in:V-N-----+ | | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,SPXXX) SUBJ:V-N (encompassing,one) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,start) MOD_ATT:N-ADJ (start,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 271 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (site,start) Parse 272 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-MOD_ATT:N-ADJ-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (site,start) Parse 273 +---------------SUBJ:V-N---------------+ +-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ | +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | +-MOD_ATT:N-ADJ-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (site,start) Parse 274 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) Parse 275 +---------------SUBJ:V-N---------------+ +-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | +-MOD_ATT:N-ADJ-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) Parse 276 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | | +MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (site,start) Parse 277 +---------------SUBJ:V-N---------------+ +-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | +-----MOD_ATT:N-ADJ----+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) Parse 278 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ | +--MOD_ATT:N-N--+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | | +---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,Two) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (mapped,region) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,GENEXXX) APPOS (region,one) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) SUBJ:V-N (encompassing,one) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (encompassing,-10) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) Parse 279 +---------------SUBJ:V-N---------------+ +--------------------SUBJ:V-N--------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-MOD_ATT:N-ADJ-+ | +------COMP_in:V-N-----+ | | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | | +---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) SUBJ:V-N (encompassing,one) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) Parse 280 +---------------SUBJ:V-N---------------+ +--------------------SUBJ:V-N--------------------+-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ | | +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | +-MOD_ATT:N-ADJ-+ | +------------OBJ:V-N-----------+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) SUBJ:V-N (encompassing,one) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 281 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | | +---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) SUBJ:V-N (encompassing,one) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,GENEXXX) Parse 282 +---------------SUBJ:V-N---------------+ +--------------------SUBJ:V-N--------------------+-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ | +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | +-MOD_ATT:N-ADJ-+ | | +--MOD_ATT:N-N--+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) SUBJ:V-N (encompassing,one) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 283 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ | +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | +---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) SUBJ:V-N (encompassing,one) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) OBJ:V-N (encompassing,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 284 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +------SUBJ:V-N-----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,GENEXXX) APPOS (region,one) SUBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (were,GENEXXX) OBJ:V-N (encompassing,site) OBJ:V-N (were,Two) OBJ:V-N (encompassing,start) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (encompassing,-10) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,sites) Parse 285 +---------------SUBJ:V-N---------------+ +-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +-MOD_ATT:N-ADJ-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,start) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 286 +---------------SUBJ:V-N---------------+ +-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +-----MOD_ATT:N-ADJ----+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,start) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 287 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | | +--MOD_ATT:N-N-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | | +MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) OBJ:V-N (encompassing,start) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 288 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,GENEXXX) APPOS (region,one) SUBJ:V-N (encompassing,region) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) MOD_ATT:N-N (site,start) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) MOD_ATT:N-ADJ (site,transcriptional) OBJ:V-N (encompassing,-10) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,sites) Parse 289 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-MOD_ATT:N-ADJ-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (site,start) Parse 290 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | | +MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (site,start) Parse 291 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (site,start) Parse 292 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ | +--MOD_ATT:N-N--+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | +---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (mapped,region) MOD_ATT:N-N (region,GENEXXX) APPOS (region,one) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (encompassing,-10) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) Parse 293 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+ +-------OBJ:V-N------+ | | | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ +------------OBJ:V-N-----------+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | +---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (encompassing,-10) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) Parse 294 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | +---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) SUBJ:V-N (encompassing,one) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 295 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ +-------OBJ:V-N------+ | | +---------------------APPOS---------------------+ +---------------------OBJ:V-N--------------------+ | | +------SUBJ:V-N-----+ +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) APPOS (region,SPXXX) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,region) APPOS (region,one) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,start) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) OBJ:V-N (overlapping,-35) Parse 296 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +---------------------OBJ:V-N--------------------+ | | | +--MOD_ATT:N-N-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | | +MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) APPOS (region,SPXXX) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,start) MOD_ATT:N-ADJ (start,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 297 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) MOD_ATT:N-ADJ (start,transcriptional) APPOS (region,SPXXX) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,GENEXXX) APPOS (region,one) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) Parse 298 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) APPOS (region,SPXXX) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,GENEXXX) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) Parse 299 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) MOD_ATT:N-ADJ (start,transcriptional) APPOS (region,SPXXX) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 300 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) APPOS (region,SPXXX) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 301 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) APPOS (region,SPXXX) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 302 +---------------SUBJ:V-N---------------+ +-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +---------------OBJ:V-N---------------+ | | +-MOD_ATT:N-ADJ-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) APPOS (region,SPXXX) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (site,start) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 303 +---------------SUBJ:V-N---------------+ +-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +---------------OBJ:V-N---------------+ | | +-MOD_ATT:N-ADJ-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) APPOS (region,SPXXX) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,transcriptional) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 304 +---------------SUBJ:V-N---------------+ +-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +---------------OBJ:V-N---------------+ | | +-----MOD_ATT:N-ADJ----+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) APPOS (region,SPXXX) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 305 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +------SUBJ:V-N-----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,GENEXXX) APPOS (region,one) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,start) OBJ:V-N (overlapping,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,sites) Parse 306 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,start) MOD_ATT:N-ADJ (start,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 307 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +---------------------OBJ:V-N--------------------+ | | +------SUBJ:V-N-----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) APPOS (region,SPXXX) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,GENEXXX) APPOS (region,one) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) OBJ:V-N (encompassing,start) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (encompassing,-10) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (binding,sites) Parse 308 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +---------------------OBJ:V-N--------------------+ | | +------SUBJ:V-N-----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) APPOS (region,SPXXX) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,GENEXXX) OBJ:V-N (overlapping,region) APPOS (region,one) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) OBJ:V-N (encompassing,start) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (encompassing,-10) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) OBJ:V-N (binding,sites) OBJ:V-N (overlapping,-35) Parse 309 +---------------SUBJ:V-N---------------+ +-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +---------------------OBJ:V-N--------------------+ | | +-MOD_ATT:N-ADJ-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) APPOS (region,SPXXX) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,start) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 310 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +---------------------OBJ:V-N--------------------+ | | | +--MOD_ATT:N-N-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | | +MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) APPOS (region,SPXXX) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) OBJ:V-N (encompassing,start) MOD_ATT:N-ADJ (start,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 311 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,GENEXXX) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) Parse 312 +---------------SUBJ:V-N---------------+ +-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ | +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | +-MOD_ATT:N-ADJ-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 313 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 314 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------OBJ:V-N------+ | | +------------OBJ:V-N------------+ | | +------SUBJ:V-N-----+ +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) APPOS (region,one) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (overlapping,site) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) Parse 315 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-------OBJ:V-N------+ | | +---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) APPOS (region,SPXXX) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (encompassing,-10) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) Parse 316 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ | | +------SUBJ:V-N-----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (region,GENEXXX) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (encompassing,-10) OBJ:V-N (overlapping,site) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) Parse 317 +---------------SUBJ:V-N---------------+ +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ | | +-MOD_ATT:N-ADJ-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) OBJ:V-N (overlapping,site) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (promoter,GENEXXX) Parse 318 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | | +---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) APPOS (region,SPXXX) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 319 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | | +---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) MOD_ATT:N-ADJ (start,transcriptional) APPOS (region,SPXXX) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 320 +---------------SUBJ:V-N---------------+ +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ | | +-MOD_ATT:N-ADJ-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) OBJ:V-N (overlapping,site) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (promoter,GENEXXX) Parse 321 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) APPOS (region,SPXXX) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 322 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) MOD_ATT:N-ADJ (start,transcriptional) APPOS (region,SPXXX) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 323 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ +-------OBJ:V-N------+ | | +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +------SUBJ:V-N-----+ +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) APPOS (region,one) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) OBJ:V-N (encompassing,start) OBJ:V-N (overlapping,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (encompassing,-10) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) Parse 324 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +------SUBJ:V-N-----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,GENEXXX) APPOS (region,one) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) OBJ:V-N (encompassing,start) OBJ:V-N (overlapping,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (encompassing,-10) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,sites) Parse 325 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | | +--MOD_ATT:N-N-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | | +MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) OBJ:V-N (encompassing,start) MOD_ATT:N-ADJ (start,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 326 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-------OBJ:V-N------+ | | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) APPOS (region,one) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (encompassing,-10) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) Parse 327 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-------OBJ:V-N------+ | | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (encompassing,-10) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) Parse 328 +-----------------------OBJ:V-N-----------------------+ +-----MOD_ATT:N-ADJ----+ +-------COMP_in:V_PASS-N-------+ +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | +--MOD_ATT:N-N-+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ:V_PAS+ | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (encompassing,region) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,promoter) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) SUBJ:V_PASS-N (mapped,sites) OBJ:V-N (encompassing,transcriptional) MOD_ATT:N-N (sites,binding) APPOS (region,one) MOD_ATT:N-N (sites,GENEXXX) MOD_ATT:N-N (region,-10) COMP_in:V_PASS-N (mapped,region) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) Parse 329 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-MOD_ATT:N-ADJ-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 330 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-MOD_ATT:N-ADJ-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) Parse 331 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 332 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,GENEXXX) Parse 333 +---------------SUBJ:V-N---------------+ +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,-10) OBJ:V-N (overlapping,site) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) Parse 334 +---------------SUBJ:V-N---------------+ +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,-10) OBJ:V-N (overlapping,site) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) Parse 335 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------------------------------OBJ:V-N-------------------------------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ | | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (overlapping,site) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (region,GENEXXX) Parse 336 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------------------------------OBJ:V-N-------------------------------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ | | | +--MOD_ATT:N-N-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | | +MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (overlapping,site) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) Parse 337 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +------SUBJ:V-N-----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,GENEXXX) APPOS (region,one) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) OBJ:V-N (encompassing,start) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (encompassing,-10) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) OBJ:V-N (binding,sites) Parse 338 +---------------SUBJ:V-N---------------+ +-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +-MOD_ATT:N-ADJ-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,start) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) Parse 339 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-------OBJ:V-N------+ | | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (encompassing,-10) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) Parse 340 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | | +MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) Parse 341 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ +------COMP_in:V-N-----+ | +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (binding,Two) SUBJ:V-N (encompassing,SPXXX) APPOS (region,one) SUBJ:V-N (encompassing,region) SUBJ:V-N (were,GENEXXX) COMP_in:V-N (mapped,promoter) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (site,start) OBJ:V-N (overlapping,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) OBJ:V-N (mapped,region) Parse 342 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ +------COMP_in:V-N-----+ | +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (binding,Two) SUBJ:V-N (encompassing,SPXXX) APPOS (region,one) SUBJ:V-N (encompassing,region) SUBJ:V-N (were,GENEXXX) COMP_in:V-N (mapped,promoter) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (site,start) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) OBJ:V-N (mapped,region) Parse 343 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ +------COMP_in:V-N-----+ | | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (binding,Two) MOD_ATT:N-ADJ (start,transcriptional) APPOS (region,one) SUBJ:V-N (were,GENEXXX) COMP_in:V-N (mapped,promoter) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) OBJ:V-N (mapped,region) Parse 344 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ +------COMP_in:V-N-----+ | | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (binding,Two) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,GENEXXX) COMP_in:V-N (mapped,promoter) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) OBJ:V-N (mapped,region) Parse 345 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (binding,Two) MOD_ATT:N-ADJ (start,transcriptional) APPOS (region,SPXXX) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,region) APPOS (region,one) SUBJ:V-N (were,GENEXXX) COMP_in:V-N (mapped,promoter) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) OBJ:V-N (mapped,region) Parse 346 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (binding,Two) MOD_ATT:N-ADJ (start,transcriptional) APPOS (region,SPXXX) SUBJ:V-N (encompassing,SPXXX) APPOS (region,one) SUBJ:V-N (were,GENEXXX) COMP_in:V-N (mapped,promoter) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) OBJ:V-N (mapped,region) Parse 347 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (binding,Two) APPOS (region,SPXXX) SUBJ:V-N (encompassing,SPXXX) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,GENEXXX) COMP_in:V-N (mapped,promoter) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) OBJ:V-N (mapped,region) Parse 348 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (binding,Two) APPOS (region,SPXXX) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,region) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,GENEXXX) COMP_in:V-N (mapped,promoter) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) OBJ:V-N (mapped,region) Parse 349 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (binding,Two) SUBJ:V-N (encompassing,SPXXX) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,GENEXXX) COMP_in:V-N (mapped,promoter) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) OBJ:V-N (mapped,region) Parse 350 +---------------SUBJ:V-N---------------+ +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------------OBJ:V-N------------+ | +--------------------------OBJ:V-N-------------------------+ | +-------OBJ:V-N------+ | | | +--------MOD_ATT:N-N-------+ | | +------SUBJ:V-N-----+ +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +--MOD_ATT:N-ADJ--+ | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (mapped,region) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (region,SPXXX) OBJ:V-N (overlapping,region) APPOS (region,one) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) MOD_ATT:N-ADJ (region,encompassing) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (overlapping,site) SUBJ:V-N (binding,GENEXXX) SUBJ:V-N (mapped,Two) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) Parse 351 +---------------SUBJ:V-N---------------+ +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------------OBJ:V-N------------+ | +--------------------------OBJ:V-N-------------------------+ | +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ | +--------MOD_ATT:N-N-------+ | | +------SUBJ:V-N-----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +--MOD_ATT:N-ADJ--+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (region,SPXXX) MOD_ATT:N-N (region,GENEXXX) OBJ:V-N (overlapping,region) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) MOD_ATT:N-ADJ (region,encompassing) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (overlapping,site) SUBJ:V-N (binding,GENEXXX) SUBJ:V-N (mapped,Two) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) Parse 352 +--------------------------------------------OBJ:V-N-------------------------------------------+ +---------------SUBJ:V-N---------------+ +--------------------------OBJ:V-N-------------------------+ | +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ | +--------MOD_ATT:N-N-------+ | | +-----MOD_ATT:N-ADJ----+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +--MOD_ATT:N-ADJ--+ +-MOD_ATT:N-ADJ-+ | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) OBJ:V-N (overlapping,site) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-ADJ (region,encompassing) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (overlapping,region) MOD_ATT:N-ADJ (sites,strong) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (promoter,GENEXXX) Parse 353 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,GENEXXX) COMP_in:V-N (mapped,promoter) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) OBJ:V-N (mapped,region) Parse 354 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ | | +------SUBJ:V-N-----+ +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,Two) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) SUBJ:V-N (were,GENEXXX) COMP_in:V-N (mapped,promoter) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) OBJ:V-N (overlapping,site) OBJ:V-N (mapped,region) Parse 355 +---------------SUBJ:V-N---------------+ +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------------OBJ:V-N------------+ | +--------------------------OBJ:V-N-------------------------+ | +-------OBJ:V-N------+ | | | +--------MOD_ATT:N-N-------+ | | +------SUBJ:V-N-----+ +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +--MOD_ATT:N-ADJ--+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | | | +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) OBJ:V-N (overlapping,region) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,SPXXX) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) MOD_ATT:N-ADJ (region,encompassing) MOD_ATT:N-N (region,-10) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) OBJ:V-N (overlapping,site) Parse 356 +---------------SUBJ:V-N---------------+ +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------------OBJ:V-N------------+ | +--------------------------OBJ:V-N-------------------------+ | +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ | +--------MOD_ATT:N-N-------+ | | +------SUBJ:V-N-----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +--MOD_ATT:N-ADJ--+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | | | +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) OBJ:V-N (overlapping,region) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (region,SPXXX) MOD_ATT:N-N (region,GENEXXX) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) MOD_ATT:N-ADJ (region,encompassing) MOD_ATT:N-N (region,-10) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) OBJ:V-N (overlapping,site) Parse 357 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +------SUBJ:V-N-----+ +------COMP_in:V-N-----+ | +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) SUBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (were,GENEXXX) COMP_in:V-N (mapped,promoter) OBJ:V-N (were,Two) OBJ:V-N (encompassing,start) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) OBJ:V-N (mapped,region) Parse 358 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ +------COMP_in:V-N-----+ | +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) SUBJ:V-N (encompassing,region) SUBJ:V-N (were,GENEXXX) COMP_in:V-N (mapped,promoter) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (site,start) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) OBJ:V-N (mapped,region) Parse 359 +---------------SUBJ:V-N---------------+ +-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | +-MOD_ATT:N-ADJ-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (site,start) Parse 360 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | | +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | | +--MOD_ATT:N-N-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | | +MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (site,start) Parse 361 +---------------SUBJ:V-N---------------+ +-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | +-----MOD_ATT:N-ADJ----+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (site,start) Parse 362 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) OBJ:V-N (encompassing,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) Parse 363 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +------SUBJ:V-N-----+ +------COMP_in:V-N-----+ | +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (binding,Two) SUBJ:V-N (encompassing,SPXXX) APPOS (region,one) SUBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (were,GENEXXX) COMP_in:V-N (mapped,promoter) OBJ:V-N (were,Two) OBJ:V-N (encompassing,start) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) OBJ:V-N (mapped,region) Parse 364 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +------SUBJ:V-N-----+ +------COMP_in:V-N-----+ | +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) SUBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (were,GENEXXX) OBJ:V-N (encompassing,site) COMP_in:V-N (mapped,promoter) OBJ:V-N (were,Two) OBJ:V-N (encompassing,start) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (encompassing,-10) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) OBJ:V-N (mapped,region) Parse 365 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | | +--MOD_ATT:N-N-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | | +MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,start) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 366 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | | +--MOD_ATT:N-N-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | | +MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) OBJ:V-N (encompassing,start) OBJ:V-N (overlapping,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) Parse 367 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ +------COMP_in:V-N-----+ | +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) SUBJ:V-N (encompassing,region) SUBJ:V-N (were,GENEXXX) COMP_in:V-N (mapped,promoter) OBJ:V-N (were,Two) MOD_ATT:N-N (site,start) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (encompassing,-10) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) OBJ:V-N (mapped,region) Parse 368 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | +------SUBJ:V-N-----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,GENEXXX) APPOS (region,one) SUBJ:V-N (encompassing,region) SUBJ:V-N (were,GENEXXX) OBJ:V-N (encompassing,site) OBJ:V-N (were,Two) OBJ:V-N (encompassing,transcriptional) MOD_ATT:N-N (site,start) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (encompassing,-10) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,sites) Parse 369 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | +------SUBJ:V-N-----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,GENEXXX) APPOS (region,one) SUBJ:V-N (encompassing,region) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) OBJ:V-N (encompassing,transcriptional) MOD_ATT:N-N (site,start) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,sites) Parse 370 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (site,start) Parse 371 +---------------SUBJ:V-N---------------+ +-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | +-MOD_ATT:N-ADJ-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (site,start) Parse 372 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,GENEXXX) Parse 373 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | | +--MOD_ATT:N-N-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | | +MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) OBJ:V-N (encompassing,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (site,start) Parse 374 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | | +--MOD_ATT:N-N-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | | | +MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) SUBJ:V-N (encompassing,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) MOD_ATT:N-N (site,start) Parse 375 +---------------SUBJ:V-N---------------+ +--------------------SUBJ:V-N--------------------+-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ | +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | +-----MOD_ATT:N-ADJ----+ | +------COMP_in:V-N-----+ | | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ | +---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) SUBJ:V-N (encompassing,one) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 376 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ +------COMP_in:V-N-----+ | +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (binding,Two) SUBJ:V-N (encompassing,SPXXX) APPOS (region,one) SUBJ:V-N (encompassing,region) SUBJ:V-N (were,GENEXXX) COMP_in:V-N (mapped,promoter) OBJ:V-N (were,Two) MOD_ATT:N-N (site,start) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) MOD_ATT:N-ADJ (site,transcriptional) OBJ:V-N (encompassing,-10) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) OBJ:V-N (mapped,region) Parse 377 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ +------COMP_in:V-N-----+ | | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ | +---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (binding,Two) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,GENEXXX) COMP_in:V-N (mapped,promoter) OBJ:V-N (were,Two) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (encompassing,-10) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) OBJ:V-N (mapped,region) Parse 378 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ | +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | +------COMP_in:V-N-----+ | | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ | +---OBJ:V-N--+ | +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) SUBJ:V-N (encompassing,one) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 379 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +---------------------OBJ:V-N--------------------+ | | +------SUBJ:V-N-----+ +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (binding,Two) APPOS (region,SPXXX) SUBJ:V-N (encompassing,SPXXX) APPOS (region,one) SUBJ:V-N (were,GENEXXX) COMP_in:V-N (mapped,promoter) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,start) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) OBJ:V-N (mapped,region) Parse 380 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ +-------OBJ:V-N------+ | | +---------------------APPOS---------------------+ +---------------OBJ:V-N---------------+ | | +------SUBJ:V-N-----+ +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) APPOS (region,SPXXX) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,region) APPOS (region,one) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) OBJ:V-N (encompassing,transcriptional) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (encompassing,-10) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) Parse 381 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ +-------OBJ:V-N------+ | | +---------------------APPOS---------------------+ +---------------OBJ:V-N---------------+ | | +------SUBJ:V-N-----+ +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) APPOS (region,SPXXX) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) APPOS (region,one) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,transcriptional) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) Parse 382 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ +-------OBJ:V-N------+ | | +---------------------APPOS---------------------+ +---------------OBJ:V-N---------------+ | | +------SUBJ:V-N-----+ +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) APPOS (region,SPXXX) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) APPOS (region,one) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) OBJ:V-N (encompassing,transcriptional) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (encompassing,-10) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) Parse 383 +---------------SUBJ:V-N---------------+ +-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +---------------OBJ:V-N---------------+ | | +-----MOD_ATT:N-ADJ----+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) APPOS (region,SPXXX) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,transcriptional) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 384 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +---------------OBJ:V-N---------------+ | | | +--MOD_ATT:N-N-+ | | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | | +MOD_AT+SUBJ+ | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) APPOS (region,SPXXX) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,GENEXXX) Parse 385 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +---------------------OBJ:V-N--------------------+ | | +------SUBJ:V-N-----+ +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (binding,Two) APPOS (region,SPXXX) SUBJ:V-N (encompassing,SPXXX) APPOS (region,one) SUBJ:V-N (were,GENEXXX) COMP_in:V-N (mapped,promoter) OBJ:V-N (were,Two) OBJ:V-N (encompassing,start) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (encompassing,-10) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) OBJ:V-N (mapped,region) Parse 386 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | +------SUBJ:V-N-----+ | +--MOD_ATT:N-N--+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | | +MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) OBJ:V-N (binding,Two) OBJ:V-N (mapped,region) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,GENEXXX) APPOS (region,one) SUBJ:V-N (were,GENEXXX) OBJ:V-N (were,Two) OBJ:V-N (encompassing,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (encompassing,-10) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) Parse 387 +---------------SUBJ:V-N---------------+ +-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | +-MOD_ATT:N-ADJ-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) MOD_ATT:N-ADJ (binding,strong) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) OBJ:V-N (encompassing,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 388 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ | +-----MOD_ATT:N-ADJ----+ | | +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | | +--MOD_ATT:N-N-+ | +------------OBJ:V-N-----------+ +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | | +MOD_AT+SUBJ+ | +MOD_ATT+MOD_ATT+-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . MOD_ATT:N-N (region,promoter) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) OBJ:V-N (encompassing,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (mapped,region) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 389 +---------------SUBJ:V-N---------------+ +-----------------------OBJ:V-N-----------------------+ +-------------OBJ:V-N------------+ +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | +-----MOD_ATT:N-ADJ----+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | | +MOD_ATT+MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (binding,GENEXXX) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,transcriptional) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 390 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ | | +------SUBJ:V-N-----+ +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (binding,Two) SUBJ:V-N (encompassing,SPXXX) MOD_ATT:N-N (region,-35) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,GENEXXX) COMP_in:V-N (mapped,promoter) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (overlapping,site) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) OBJ:V-N (mapped,region) Parse 391 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (binding,Two) APPOS (region,SPXXX) SUBJ:V-N (encompassing,SPXXX) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,GENEXXX) COMP_in:V-N (mapped,promoter) OBJ:V-N (were,Two) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (encompassing,-10) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) OBJ:V-N (mapped,region) Parse 392 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------------------------------OBJ:V-N-------------------------------------------+ | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ | | | +--MOD_ATT:N-N-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | | +MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) OBJ:V-N (overlapping,site) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (promoter,GENEXXX) Parse 393 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------------OBJ:V-N--------------------+ | | +------SUBJ:V-N-----+ +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | +MOD_ATT:N-+ | | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (binding,Two) SUBJ:V-N (encompassing,SPXXX) APPOS (region,one) SUBJ:V-N (were,GENEXXX) COMP_in:V-N (mapped,promoter) OBJ:V-N (were,Two) OBJ:V-N (encompassing,start) OBJ:V-N (overlapping,region) MOD_ATT:N-ADJ (start,transcriptional) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (encompassing,-10) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) OBJ:V-N (mapped,region) Parse 394 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | | +--MOD_ATT:N-N-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | | | +MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (site,start) APPOS (region,one) MOD_ATT:N-N (sites,binding) MOD_ATT:N-ADJ (site,transcriptional) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (encompassing,-10) OBJ:V-N (encompassing,region) MOD_ATT:N-ADJ (sites,strong) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) Parse 395 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +-----------------------OBJ:V-N-----------------------+ | +------SUBJ:V-N-----+ +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,GENEXXX) COMP_in:V-N (mapped,promoter) OBJ:V-N (were,Two) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (encompassing,-10) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) OBJ:V-N (mapped,region) Parse 396 +---------------SUBJ:V-N---------------+ +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------------OBJ:V-N------------+ | +--------------------------OBJ:V-N-------------------------+ | +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ | +--------MOD_ATT:N-N-------+ | | +------SUBJ:V-N-----+ +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +--MOD_ATT:N-ADJ--+ +-MOD_ATT:N-ADJ-+ | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (binding,Two) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (region,SPXXX) OBJ:V-N (overlapping,region) APPOS (region,one) MOD_ATT:N-ADJ (site,transcriptional) SUBJ:V-N (were,GENEXXX) COMP_in:V-N (mapped,promoter) OBJ:V-N (were,Two) MOD_ATT:N-ADJ (region,encompassing) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (overlapping,site) SUBJ:V-N (binding,GENEXXX) SUBJ:V-N (mapped,Two) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) OBJ:V-N (mapped,region) Parse 397 +---------------SUBJ:V-N---------------+ +--------------------------------------------OBJ:V-N-------------------------------------------+ +-------------OBJ:V-N------------+ | +--------------------------OBJ:V-N-------------------------+ | | +-----MOD_ATT:N-ADJ----+ | +------------OBJ:V-N-----------+ | +--------MOD_ATT:N-N-------+ | | | +--MOD_ATT:N-N-+ | +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +--MOD_ATT:N-ADJ--+ | | | | +MOD_AT+SUBJ+ | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ +MOD_ATT:N-+MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . COMP_in:V-N (mapped,promoter) MOD_ATT:N-ADJ (start,transcriptional) OBJ:V-N (mapped,region) SUBJ:V-N (mapped,Two) MOD_ATT:N-N (site,start) MOD_ATT:N-N (region,SPXXX) APPOS (region,one) MOD_ATT:N-N (sites,binding) OBJ:V-N (overlapping,site) MOD_ATT:N-N (sites,GENEXXX) SUBJ:V-N (were,sites) OBJ:V-N (were,Two) MOD_ATT:N-ADJ (region,encompassing) MOD_ATT:N-N (region,-10) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) OBJ:V-N (overlapping,region) MOD_ATT:N-ADJ (sites,strong) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (promoter,GENEXXX) Parse 398 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | +------SUBJ:V-N-----+ +------COMP_in:V-N-----+ | +-----OBJ:V-N----+--------SUBJ:V-N-------+-----OBJ:V-N-----+ | | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (binding,Two) SUBJ:V-N (encompassing,SPXXX) APPOS (region,one) SUBJ:V-N (encompassing,region) SUBJ:V-N (were,GENEXXX) OBJ:V-N (encompassing,site) COMP_in:V-N (mapped,promoter) OBJ:V-N (were,Two) OBJ:V-N (encompassing,transcriptional) MOD_ATT:N-N (site,start) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (encompassing,-10) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) OBJ:V-N (mapped,region) Parse 399 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+-----------------------OBJ:V-N-----------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ | +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | +------SUBJ:V-N-----+ +------COMP_in:V-N-----+ | | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ | | +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (binding,Two) APPOS (region,one) SUBJ:V-N (were,GENEXXX) COMP_in:V-N (mapped,promoter) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,transcriptional) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) OBJ:V-N (mapped,region) Parse 400 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +--------------------SUBJ:V-N--------------------+-----------------------OBJ:V-N-----------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ | +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | +------SUBJ:V-N-----+ +------COMP_in:V-N-----+ | | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ | +---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (binding,Two) APPOS (region,one) SUBJ:V-N (were,GENEXXX) COMP_in:V-N (mapped,promoter) OBJ:V-N (were,Two) OBJ:V-N (encompassing,transcriptional) SUBJ:V-N (encompassing,one) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (encompassing,-10) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) OBJ:V-N (mapped,region) Parse 401 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+---------------------APPOS---------------------+ +---------------OBJ:V-N---------------+ | | +------SUBJ:V-N-----+ +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (binding,Two) APPOS (region,SPXXX) SUBJ:V-N (encompassing,SPXXX) APPOS (region,one) SUBJ:V-N (were,GENEXXX) COMP_in:V-N (mapped,promoter) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,transcriptional) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) OBJ:V-N (mapped,region) Parse 402 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | +------SUBJ:V-N-----+ +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+ +-APPOS-+SUBJ:V-+ +MOD_+ +SUBJ:V-N+ +MOD_+ | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (binding,Two) SUBJ:V-N (encompassing,SPXXX) APPOS (region,one) SUBJ:V-N (were,GENEXXX) COMP_in:V-N (mapped,promoter) OBJ:V-N (were,Two) MOD_ATT:N-N (region,-10) OBJ:V-N (encompassing,transcriptional) OBJ:V-N (overlapping,region) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (encompassing,site) MOD_ATT:N-N (region,-35) OBJ:V-N (overlapping,SPXXX) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) OBJ:V-N (mapped,region) Parse 403 +---------------SUBJ:V-N---------------+ +-------------OBJ:V-N------------+ | +-----------------------OBJ:V-N-----------------------+ +-------OBJ:V-N------+ | +------------OBJ:V-N-----------+ +------------OBJ:V-N------------+ +---------------OBJ:V-N---------------+ | | +------SUBJ:V-N-----+ +------COMP_in:V-N-----+ | +-----OBJ:V-N----+ | +-----OBJ:V-N-----+ | | | +MOD_ATT+SUBJ:V-+OBJ:V-+ | | +MOD_ATT+ +-APPOS-+SUBJ:V-+--OBJ:V-N--+ | +SUBJ:V-N+---OBJ:V-N--+ | | +MOD_+ | | | | | | | | | | | | | | | | | | | | | Two strong GENEXXX binding sites were mapped in the GENEXXX promoter region , one overlapping the -35 region and the SPXXX encompassing the -10 region and the transcriptional start site . OBJ:V-N (overlapping,SPXXX) OBJ:V-N (binding,Two) SUBJ:V-N (encompassing,SPXXX) OBJ:V-N (overlapping,-35) APPOS (region,one) SUBJ:V-N (were,GENEXXX) COMP_in:V-N (mapped,promoter) OBJ:V-N (were,Two) OBJ:V-N (encompassing,transcriptional) SUBJ:V-N (overlapping,one) MOD_ATT:N-ADJ (GENEXXX,strong) OBJ:V-N (encompassing,-10) SUBJ:V-N (binding,GENEXXX) OBJ:V-N (encompassing,region) SUBJ:V-N (mapped,Two) OBJ:V-N (overlapping,region) OBJ:V-N (encompassing,site) MOD_ATT:N-N (promoter,GENEXXX) OBJ:V-N (binding,sites) MOD_ATT:N-N (site,start) OBJ:V-N (mapped,region)