Bayesian inference on stem cell niches

Description

This set of three programs implements the approach presented in our paper "The Stem Cell Population of the Human Colon Crypt: Analysis via Methylation Patterns" (Pierre Nicolas, Kyoung-Mee Kim, Darryl Shibata and Simon Tavaré. PLoS Comput Biol 3(2):e28. 2007). Information about how to install the software can be found in the INSTALL file. Usage of the program is described in the README file. Linux x86 Binaries, source code and data sets are included in the tar-gzipped archive mcmcniche.tar.gz.