Directory Agmial2/pa_manager/src/pam/protdb/

Directory Created:
2004-09-29 16:40
Total Files:
41
Deleted Files:
2
Lines of Code:
7792

[root]/Agmial2/pa_manager/src/pam/protdb

Lines of Code

Agmial2/pa_manager/src/pam/protdb/ Lines of Code

Developers

Author Changes Lines of Code Lines per Change
Totals 179 (100.0%) 10858 (100.0%) 60.6
vloux 148 (82.7%) 7461 (68.7%) 50.4
rbossy 28 (15.6%) 3392 (31.2%) 121.1
agmial 1 (0.6%) 5 (0.0%) 5.0
csoubrie 2 (1.1%) 0 (0.0%) 0.0

Most Recent Commits

vloux 2007-12-10 10:36

ParalogyResults : jnpe correction.

12 lines of code changed in:

  • Agmial2/pa_manager/src/pam/protdb: PAMHomologyResultSchema.java (+1 -1), ProteinDB.java (+11 -4)
vloux 2007-03-09 13:26

bugfix : pareo link
cdd graphic
missing features in protein panel

2 lines of code changed in:

  • Agmial2/pa_manager/src/pam/protdb: ProteinDB.java (+2 -2)
vloux 2007-01-25 18:10

Origin,goterms and Keyword display for homology result
Externalisation into HomologyPanel of HomologyResults display (from ProteinPanel)

1 lines of code changed in:

  • Agmial2/pa_manager/src/pam/protdb: GoListSchema.java (+1 -1)
vloux 2007-01-24 18:15

Added classes to manage goterms, keywords and origin of a match.
Display of origin in table and graphics

363 lines of code changed in:

  • Agmial2/pa_manager/src/pam/protdb: GoListSchema.java (new 96), KwListSchema.java (new 94), MatchOriginSchema.java (new 80), PAMHomologyResult.java (+3), PAMHomologyResultSchema.java (+3), ProteinDB.java (+87 -2)
vloux 2006-11-22 17:30

ProteinDB : getPAMotifFeature : added paramId filter.

1 lines of code changed in:

  • Agmial2/pa_manager/src/pam/protdb: ProteinDB.java (+1 -1)
vloux 2006-11-18 16:21

ProteinDB : getPAMotifFeature : added paramId filter.

2 lines of code changed in:

  • Agmial2/pa_manager/src/pam/protdb: ProteinDB.java (+2 -2)
vloux 2006-11-16 16:46

Addition of a statistics page with pie charts (Function, Status, EC) made with JFreeChart.

206 lines of code changed in:

  • Agmial2/pa_manager/src/pam/protdb: PAMProtein.java (+1), ProteinDB.java (+205 -5)
vloux 2006-10-25 11:41

Merge CedricSoubrie branch and HEAD

4 lines of code changed in:

  • Agmial2/pa_manager/src/pam/protdb: MetaDataRetriever.java (del), ProteinDB.java (+4 -2), QueryBuilder.java (del)
vloux 2006-05-03 17:42

#BugFix :
Paralog display (ParalogyTable // HomologyGraphic)
SerachAnnotationPanel : serach by gene of interest fixed.

66 lines of code changed in:

  • Agmial2/pa_manager/src/pam/protdb: ProteinDB.java (+66)
csoubrie 2006-04-24 15:06

Class added for the new searchPanel (first Version)

0 lines of code changed in:

  • Agmial2/pa_manager/src/pam/protdb: MetaDataRetriever.java (new), QueryBuilder.java (new)
vloux 2006-04-20 16:59

ConnectionPool :
- clean destroy

ActionsQueues/Motivations :
- sleepTime passed in constructor

ProteinDB/DAOs :
- statements not released properly causing locks

14 lines of code changed in:

  • Agmial2/pa_manager/src/pam/protdb: PAMHomologyResultSchema.java (-1), PAMProteinActionSchema.java (-1), PAMProteinRefActionSchema.java (-1), ProteinDB.java (+14 -2)
vloux 2006-04-04 15:04

Browse by Locus Tag

49 lines of code changed in:

  • Agmial2/pa_manager/src/pam/protdb: PAMProteinRef.java (+25 -1), PAMProteinRefSchema.java (+1 -1), ProteinDB.java (+23 -7)
vloux 2006-03-17 17:13

Bugfixes

11 lines of code changed in:

  • Agmial2/pa_manager/src/pam/protdb: ProteinDB.java (+11 -7)
vloux 2006-03-16 13:01

Chgt wsdl
Pool connection sgbd
BugFix Search
Control

1704 lines of code changed in:

  • Agmial2/pa_manager/src/pam/protdb: PAMHomologyResultSchema.java (+14 -10), PAMProtein.java (+7 -4), PAMProteinSchema.java (+160 -161), ProteinDB.java (+1523 -1395)
vloux 2006-03-07 15:27

[#197] Listes proteines
BugFix

57 lines of code changed in:

  • Agmial2/pa_manager/src/pam/protdb: PAMProteinListSchema.java (+35), ProteinDB.java (+22)
vloux 2006-03-06 10:31

[#203] S?curit? : Single SignOn +Form based Login
PAM
[#213] Filtrer quote et retours chariots dans les formulaires
PAM

15 lines of code changed in:

  • Agmial2/pa_manager/src/pam/protdb: ProteinDB.java (+15)
vloux 2006-02-27 14:41

AGMIAL Feature #197
Gestion liste : sauvegarde d'un resultat de recherche comme une nouvelle liste.

51 lines of code changed in:

  • Agmial2/pa_manager/src/pam/protdb: PAMProteinListSchema.java (+23 -1), ProteinDB.java (+28)
vloux 2006-02-24 15:58

AGMIAL Feature #197
Gestion liste

530 lines of code changed in:

  • Agmial2/pa_manager/src/pam/protdb: PAMProtein.java (+27 -4), PAMProteinList.java (new 102), PAMProteinListSchema.java (new 200), ProteinDB.java (+201 -1)
vloux 2006-01-16 08:58

Changement de start ? la vol?e (Affichage dans editFeature de tous les starts putatifs de l'ORF, transmission des annotations existantes).

65 lines of code changed in:

  • Agmial2/pa_manager/src/pam/protdb: PAMProteinRefActionSchema.java (+8), PAMProteinSchema.java (+8 -1), ProteinDB.java (+49 -4)
vloux 2005-09-22 17:11

BugFixes

7 lines of code changed in:

  • Agmial2/pa_manager/src/pam/protdb: PAMHomologyResultSchema.java (+1 -1), PAMProteinRef.java (+2 -1), PAMProteinRefAction.java (+1), ProteinDB.java (+3 -3)

(9 more)

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