agmial Developers: agmial

Login name:
agmial
Total Commits:
21 (0.4%)
Lines of Code:
443 (0.2%)
Most Recent Commit:
2005-04-15 10:50

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Activity by Hour of Day for agmial

Activity by Day of Week for agmial

Activity in Directories

Directory Changes Lines of Code Lines per Change
Totals 21 (100.0%) 443 (100.0%) 21.0
BioTools/src/biotools/calc/ 9 (42.9%) 272 (61.4%) 30.2
doc/ 3 (14.3%) 84 (19.0%) 28.0
Agmial2/pa_manager/src/pam/control/ 2 (9.5%) 48 (10.8%) 24.0
Agmial2/ 3 (14.3%) 23 (5.2%) 7.6
BioTools/ 1 (4.8%) 6 (1.4%) 6.0
Agmial2/pa_manager/src/pam/protdb/ 1 (4.8%) 5 (1.1%) 5.0
Agmial2/pa_manager/sql/ 1 (4.8%) 4 (0.9%) 4.0
Agmial2/ca_manager/src/cam/reader/ 1 (4.8%) 1 (0.2%) 1.0

Activity of agmial

Most Recent Commits

agmial 2005-04-15 10:50

Homologies structuraales dans la bdd...

9 lines of code changed in:

  • Agmial2/pa_manager/sql: protdb_creation.sql (+4)
  • Agmial2/pa_manager/src/pam/protdb: PAMHomologyResultSchema.java (+5 -2)
agmial 2005-04-13 15:30

J'ai enlev? des System.err/out.println qui polluaient les logs...

1 lines of code changed in:

  • BioTools/src/biotools/calc: BioCalc.java (+1 -1), FROSTText.java (-2)
agmial 2005-04-13 15:03

Added the FROST_CALC skill.
Added restrictions on motivations of protein calculations:
- setMinProteinSizeRestriction: motivation only for proteins larger than the given threshold
- setMaxProteinSizeRestriction: motivation only for proteins smaller than the given threshold
- setTargetSourceRestriction: motivation only for proteins from the given source
TODO: restriction on datasets

48 lines of code changed in:

  • Agmial2/pa_manager/src/pam/control: PAMControl.java (+19), ProteinActionMotivation.java (+29 -1)
agmial 2005-04-08 17:58

Parametres de FROST ... + petite boulette dans SIGSEQCalc

12 lines of code changed in:

  • BioTools: biotools.props (+6)
  • BioTools/src/biotools/calc: FROSTCalc.java (+4 -2), FROSTParams.java (+1 -1), SIGSEQCalc.java (+1 -1)
agmial 2005-04-08 13:44

Ajout de FROST dans biotools.calc
J'ai du ajouter quelques membres dans la classe HomologyMatchPair pour mettre les informations sur la structure

RB

265 lines of code changed in:

  • BioTools/src/biotools/calc: FROSTCalc.java (new 49), FROSTParams.java (new 38), FROSTText.java (new 125), HomologyMatchPair.java (+53 -14)
agmial 2005-02-11 17:32

Modifs sur la doc.

1 lines of code changed in:

  • doc: agmial_admin_guide.tex (+1 -1)
agmial 2005-02-11 17:28

Corrections sur la doc. Casse les... pipes.

1 lines of code changed in:

  • doc: agmial_admin_guide.tex (+1 -1)
agmial 2005-02-11 17:22

Corrections et mise en forme de la doc.

82 lines of code changed in:

  • doc: agmial_admin_guide.tex (+82 -96)
agmial 2005-02-09 10:11

Bugfix ContigPanel

1 lines of code changed in:

  • Agmial2/ca_manager/src/cam/reader: ContigPanel.java (+1 -1)
agmial 2005-02-08 16:01

*** empty log message ***

21 lines of code changed in:

  • Agmial2: template_organization.properties (+2 -2)
agmial 2005-01-18 16:34

Essai avec les update/commit entre branches: correction de bugs dans start_*

2 lines of code changed in:

  • Agmial2: build.xml (+2 -2)
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