YeastIP is a comprehensive gene database which contains the major barcodes of all the species of the subphylum Saccharomycotina and tools to establish the identification of yeasts to the species level and their phylogenetic relationships. How to use YeastIP?

Last release : 1st October 2019


Tweets by @YeastIP_CIRM

Please cite

Weiss S., Samson F., Navarro D., Casaregola S. (2013). YeastIP: a database for identification and phylogeny of ascomycetous yeasts. FEMS Yeast Res. 13:117-125
http://genome.jouy.inra.fr/yeastip/


Sequences content

The database contains 5519 sequences, representing 68 clades, 100 genera and 1265 species for the following markers:

Marker
Number of sequences
ACT1
330
ITS
884
LSU complete
417
LSU D1/D2
1398
mtCOX II
277
mtSSU
352
RPB1
252
RPB2
327
SSU complete
749
TEF1-alpha
540