Keyword

Search a character string in all the fields of the database. Useful to search species synonyms, CBS collection numbers, accession numbers, comments...





Taxonomy

Search a specific entry in the database. Useful when species name is known.

Clade:

  

Genus:                            Species:



Sequences

Search a specific marker. This tool is linked to the taxonomic search.

Marker:

       
OR  

Strain status

Type strains and non type strains (recommended)
Type strains only



Results

You search with this keyword(s): ".$Keywordlist; } else if(ISSET($_POST['Sort1'])){ echo "

Results

Your search: $Clade $Genus $Current_Name $type"; if (!empty($Marker[0])) { echo ", containing the marker: $Marker[0]"; } else { echo ", all markers" ; } for ($j=1; $j$Marker[$j]"; } } if(empty($Sort)) { $Sort='genus.Genus, current_name.Specy'; } //echo "sort by :$Sort"; if(empty($Acces)) { $Acces='%%'; } if(empty($Genus)) { $Genus='%%'; } if(empty($Current_Name)) { $Current_Name='%%'; } ?>

There are $total sequences corresponding to your request.

"; if ($total>=500) { echo "Too much results, please refine your search"; } else { print "
"; print ""; ?>

Go to concatenation tool:

Export FASTA formatted sequences:

'; echo ''; echo ''; echo ''; echo ''; } else { echo ''; } echo ''; echo ''; echo ''; echo ''; echo ''."\n"; } echo '
Select Accession Type Current Name Strain Marker Length Synonym Name cited in NCBI
'; echo ''.$row["Accession"].''.$row["Type"].''.$row["Genus"].' '.$row["Specy"].''; if (!empty($row["Variety"])) { echo ' var. '.$row["Variety"].''.$row["Strain"].' '.$row["Marker"].''.$row["Length"].''.$row["Organism"].'
'."\n"; echo ''; } ?>