October 2007 Commit Log

Number of Commits:

2

Number of Active Developers:

1

vloux 2007-10-24 11:47 #2

CAM Model modifications for homology storage.
Added CAM_HOMOLOGY_RESULT

101 lines of code changed in:

• Agmial2/ca_manager/sql: contigdb_creation.sql (+101 -2)

vloux 2007-10-24 11:42 #1

ExtractORFAction :
for each CDS take the surrounding ORF and put it in a specific layer.
OrfAlign : similarity search on ORFs created by ExtractOrfAction

809 lines of code changed in:

• Agmial2/ca_manager/src/cam/contigdb: CAMFeatureAction.java (+3), CAMFeatureSchema.java (+2 -2), CAMHomologyResult.java (new 110), CAMHomologyResultSchema.java (new 169), ContigDB.java (+161 -21)
• Agmial2/ca_manager/src/cam/control: CAMControl.java (+34 -4), ExtractOrfAction.java (new 105), FeatureCalcAction.java (new 218), UpdateCDSAction.java (+2 -1)
• Agmial2/ca_manager/src/cam/reader: EditFeature.java (+2 -1), MugenPanel.java (+3 -3)

September 2007 »